MGE detailed information
MGE type: Prophage MGE length: 50668 bp
Accession: NZ_CP028116 Location: 5491419..5542086 Organism: Escherichia coli O26 str. RM8426 Replicon: chromosome
Accession: NZ_CP028116 Location: 5491419..5542086 Organism: Escherichia coli O26 str. RM8426 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3M_RS30285 () | 5487123..5488205 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| I3M_RS30290 () | 5488324..5489826 | - | 1503 | WP_001332879.1 | DUF853 domain-containing protein | - |
| I3M_RS30295 () | 5489956..5490975 | - | 1020 | WP_000061768.1 | NADPH-dependent aldehyde reductase Ahr | - |
| I3M_RS30305 () | 5491419..5492681 | + | 1263 | WP_000772685.1 | hypothetical protein ; Integrase | Integrase |
| I3M_RS30310 () | 5492925..5493764 | - | 840 | WP_000356577.1 | hypothetical protein | - |
| I3M_RS30315 () | 5493903..5495489 | - | 1587 | WP_032344740.1 | hypothetical protein | - |
| I3M_RS30325 () | 5495779..5496456 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| I3M_RS30330 () | 5496456..5496803 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| I3M_RS30335 () | 5496823..5498394 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| I3M_RS30340 () | 5498704..5498976 | - | 273 | WP_001185332.1 | ogr/Delta-like zinc finger family protein | - |
| I3M_RS30345 () | 5498978..5499532 | - | 555 | WP_000991130.1 | hypothetical protein | - |
| I3M_RS30350 () | 5499529..5500281 | - | 753 | WP_000214377.1 | hypothetical protein | - |
| I3M_RS30355 () | 5501196..5501456 | + | 261 | WP_001084853.1 | AlpA family transcriptional regulator | - |
| I3M_RS30360 () | 5501453..5502001 | + | 549 | WP_000761643.1 | host cell division inhibitor Icd-like protein | - |
| I3M_RS30365 () | 5502001..5502225 | + | 225 | WP_001014979.1 | hypothetical protein | - |
| I3M_RS30370 () | 5502222..5502545 | + | 324 | WP_000842358.1 | DUF5375 family protein | - |
| I3M_RS30375 () | 5502560..5504893 | + | 2334 | WP_000016235.1 | toprim domain-containing protein | - |
| I3M_RS30380 () | 5505799..5506623 | + | 825 | WP_000594911.1 | hypothetical protein | - |
| I3M_RS30385 () | 5506672..5507052 | - | 381 | WP_000916596.1 | hypothetical protein | - |
| I3M_RS30400 () | 5508612..5509782 | + | 1171 | Protein_5438 | IS3 family transposase | - |
| I3M_RS31675 () | 5509865..5510122 | + | 258 | WP_000177060.1 | hypothetical protein | - |
| I3M_RS30410 () | 5510680..5511447 | - | 768 | WP_000175457.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| I3M_RS30415 () | 5511448..5512404 | - | 957 | WP_000684856.1 | Vitamin B12 import system permease protein BtuC | VF |
| I3M_RS30420 () | 5512401..5513399 | - | 999 | WP_000125190.1 | Vitamin B12 import system permease protein BtuC | VF |
| I3M_RS30425 () | 5513396..5514298 | - | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| I3M_RS30430 () | 5514343..5516667 | - | 2325 | WP_000188267.1 | Fe(3+) dicitrate transport protein FecA | - |
| I3M_RS30435 () | 5516754..5517707 | - | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| I3M_RS30440 () | 5517704..5518225 | - | 522 | WP_001283626.1 | hypothetical protein | VF |
| I3M_RS32040 () | 5518362..5518430 | + | 69 | WP_211180522.1 | protein YkiE | - |
| I3M_RS30450 () | 5518517..5519214 | + | 698 | Protein_5448 | IS1 family transposase | - |
| I3M_RS30455 () | 5519234..5519299 | - | 66 | Protein_5449 | omptin family outer membrane protease | - |
| I3M_RS30460 () | 5519532..5519636 | + | 105 | Protein_5450 | integrase core domain-containing protein | - |
| I3M_RS30465 () | 5519976..5520233 | + | 258 | WP_000555341.1 | hypothetical protein | - |
| I3M_RS30475 () | 5520553..5520684 | - | 132 | Protein_5452 | IS3 family transposase | - |
| I3M_RS30480 () | 5520966..5522324 | + | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| I3M_RS30485 () | 5522563..5523948 | - | 1386 | WP_000998019.1 | IS66 family transposase ISEc8 | Transposase |
| I3M_RS30490 () | 5523998..5524345 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| I3M_RS30495 () | 5524342..5524722 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| I3M_RS30505 () | 5525077..5525511 | - | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| I3M_RS30510 () | 5525499..5525741 | - | 243 | Protein_5458 | zinc-ribbon domain-containing protein | - |
| I3M_RS30515 () | 5525805..5526961 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| I3M_RS30520 () | 5526912..5529361 | + | 2450 | Protein_5460 | hypothetical protein | - |
| I3M_RS30525 () | 5529437..5529892 | + | 456 | WP_000581504.1 | hypothetical protein | - |
| I3M_RS30530 () | 5529971..5530204 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| I3M_RS30540 () | 5530304..5531122 | + | 819 | WP_001234622.1 | DUF945 domain-containing protein | - |
| I3M_RS30545 () | 5531177..5531662 | + | 486 | WP_000849588.1 | antirestriction protein | - |
| I3M_RS30550 () | 5531678..5532154 | + | 477 | WP_001186774.1 | RadC family protein | - |
| I3M_RS30555 () | 5532217..5532438 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| I3M_RS30560 () | 5532601..5532969 | + | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| I3M_RS30565 () | 5533059..5533433 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| I3M_RS30570 () | 5533430..5533918 | + | 489 | WP_000777547.1 | hypothetical protein | - |
| I3M_RS30575 () | 5533930..5534127 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| I3M_RS31915 () | 5534212..5534364 | + | 153 | WP_001280445.1 | hypothetical protein | - |
| I3M_RS30600 () | 5535409..5536059 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| I3M_RS30605 () | 5536067..5537047 | - | 981 | WP_000991415.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| I3M_RS30610 () | 5537112..5538218 | - | 1107 | WP_001341302.1 | N-acetylneuraminate epimerase | - |
| I3M_RS30615 () | 5538238..5538954 | - | 717 | WP_071998827.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| I3M_RS30635 () | 5540410..5541012 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| I3M_RS30640 () | 5541490..5542086 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| I3M_RS30650 () | 5542567..5543115 | + | 549 | WP_000695546.1 | type 1 fimbrial major subunit FimA | - |
| I3M_RS30655 () | 5543180..5543719 | + | 540 | WP_000824105.1 | type 1 fimbrial protein | - |
| I3M_RS30660 () | 5543756..5544481 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|