MGE detailed information
MGE type: Prophage MGE length: 102736 bp
Accession: NZ_CP028116 Location: 2124433..2227168 Organism: Escherichia coli O26 str. RM8426 Replicon: chromosome
Accession: NZ_CP028116 Location: 2124433..2227168 Organism: Escherichia coli O26 str. RM8426 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3M_RS12375 () | 2120946..2121692 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| I3M_RS12380 () | 2121781..2122467 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| I3M_RS12385 () | 2122645..2122848 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| I3M_RS12390 () | 2122884..2124344 | - | 1461 | Protein_2156 | mannitol dehydrogenase family protein | - |
| I3M_RS12395 () | 2124433..2125716 | - | 1284 | Protein_2157 | MHS family MFS transporter YdfJ | - |
| I3M_RS31465 () | 2126319..2126432 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| I3M_RS12405 () | 2126501..2126734 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| I3M_RS12410 () | 2127051..2127641 | + | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I3M_RS12415 () | 2127739..2128314 | - | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| I3M_RS12420 () | 2128314..2131274 | - | 2961 | WP_001448491.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I3M_RS12425 () | 2131339..2131938 | - | 600 | WP_001233114.1 | Outer membrane protein X | VF |
| I3M_RS12430 () | 2132009..2135422 | - | 3414 | WP_000515505.1 | host specificity protein J | - |
| I3M_RS12435 () | 2135483..2136130 | - | 648 | WP_000741589.1 | tail assembly protein | - |
| I3M_RS12440 () | 2136028..2136771 | - | 744 | WP_000140707.1 | C40 family peptidase | - |
| I3M_RS12445 () | 2136776..2137474 | - | 699 | WP_001152371.1 | phage minor tail protein L | - |
| I3M_RS12450 () | 2137484..2137813 | - | 330 | WP_000447251.1 | phage tail protein | - |
| I3M_RS12455 () | 2137813..2140878 | - | 3066 | WP_000372024.1 | phage tail tape measure protein | - |
| I3M_RS12460 () | 2140850..2141179 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| I3M_RS12465 () | 2141188..2141574 | - | 387 | WP_001341514.1 | phage minor tail protein G | - |
| I3M_RS12470 () | 2141635..2142378 | - | 744 | WP_000211132.1 | Ig domain-containing protein | - |
| I3M_RS12475 () | 2142389..2142790 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| I3M_RS12480 () | 2142787..2143365 | - | 579 | WP_000677128.1 | phage tail protein | - |
| I3M_RS12485 () | 2143377..2143652 | - | 276 | WP_001283148.1 | DNA breaking-rejoining protein | - |
| I3M_RS12490 () | 2143645..2143968 | - | 324 | WP_001097041.1 | DUF2190 family protein | - |
| I3M_RS12495 () | 2144055..2146082 | - | 2028 | WP_001136588.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| I3M_RS12500 () | 2146027..2147535 | - | 1509 | WP_000985929.1 | phage portal protein | - |
| I3M_RS12505 () | 2147535..2147747 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| I3M_RS12510 () | 2147744..2149843 | - | 2100 | WP_000507036.1 | phage terminase large subunit family protein | - |
| I3M_RS12515 () | 2149852..2150391 | - | 540 | WP_000421825.1 | DUF1441 family protein | - |
| I3M_RS12520 () | 2150952..2151158 | - | 207 | WP_001031435.1 | hypothetical protein | - |
| I3M_RS12530 () | 2151459..2151869 | + | 411 | WP_000035577.1 | DUF1398 domain-containing protein | - |
| I3M_RS12535 () | 2152021..2152194 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| I3M_RS31470 () | 2152366..2152521 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| I3M_RS31475 () | 2152601..2152666 | - | 66 | WP_122134696.1 | hypothetical protein | - |
| I3M_RS12545 () | 2152669..2152857 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| I3M_RS12550 () | 2152868..2153080 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| I3M_RS12555 () | 2153443..2153940 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| I3M_RS12560 () | 2153937..2154470 | - | 534 | WP_001092971.1 | lysozyme | - |
| I3M_RS12565 () | 2154467..2154778 | - | 312 | WP_000189915.1 | YdfR family protein | - |
| I3M_RS12570 () | 2154783..2154998 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| I3M_RS31965 () | 2155218..2155388 | + | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| I3M_RS12575 () | 2155752..2155967 | - | 216 | WP_000066483.1 | cold shock-like protein CspB | - |
| I3M_RS12580 () | 2156268..2156480 | + | 213 | WP_106875218.1 | cold shock-like protein CspF | - |
| I3M_RS31480 () | 2156535..2156624 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| I3M_RS12585 () | 2156902..2157654 | - | 753 | WP_001047133.1 | antitermination protein | - |
| I3M_RS12590 () | 2157668..2158717 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| I3M_RS12595 () | 2158719..2158997 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| I3M_RS12600 () | 2159064..2159315 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| I3M_RS12605 () | 2159532..2159687 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I3M_RS12610 () | 2159759..2160046 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| I3M_RS12615 () | 2160046..2160285 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| I3M_RS12620 () | 2160310..2160615 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| I3M_RS12625 () | 2160818..2161150 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| I3M_RS12630 () | 2161587..2162927 | - | 1341 | WP_000589012.1 | ISNCY family transposase ISCARN112 | Transposase |
| I3M_RS12635 () | 2162961..2163380 | - | 420 | WP_001151195.1 | DUF977 family protein | - |
| I3M_RS12640 () | 2163421..2164386 | - | 966 | WP_000054507.1 | hypothetical protein | - |
| I3M_RS12645 () | 2164367..2164888 | - | 522 | WP_000705349.1 | hypothetical protein | - |
| I3M_RS12650 () | 2164872..2165099 | - | 228 | WP_000476993.1 | transcriptional regulator | - |
| I3M_RS12655 () | 2165177..2165584 | + | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| I3M_RS12660 () | 2165777..2165932 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| I3M_RS12665 () | 2165934..2166509 | + | 576 | WP_000347171.1 | hypothetical protein | - |
| I3M_RS12670 () | 2166996..2167184 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| I3M_RS12675 () | 2167181..2167372 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| I3M_RS12680 () | 2167466..2169937 | + | 2472 | WP_000048369.1 | exonuclease | - |
| I3M_RS12685 () | 2170010..2170102 | + | 93 | Protein_2217 | excisionase family protein | - |
| I3M_RS12690 () | 2170133..2171704 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| I3M_RS12695 () | 2171724..2172071 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| I3M_RS12700 () | 2172071..2172748 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| I3M_RS12705 () | 2172738..2172968 | + | 231 | Protein_2221 | excisionase family protein | - |
| I3M_RS12710 () | 2173003..2174067 | + | 1065 | WP_000877010.1 | IS91 family transposase ISTha3 | Transposase |
| I3M_RS12720 () | 2175284..2175550 | + | 267 | Protein_2224 | Putative defective protein IntQ ; Integrase | Integrase |
| I3M_RS12725 () | 2175728..2175970 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| I3M_RS12735 () | 2176341..2177354 | - | 1014 | WP_122993102.1 | hypothetical protein | VF |
| I3M_RS12745 () | 2177757..2178026 | - | 270 | WP_001023433.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3M_RS12750 () | 2178028..2179341 | - | 1314 | WP_000279009.1 | ISNCY family transposase KIS | Transposase |
| I3M_RS12755 () | 2179406..2180029 | - | 624 | WP_001456919.1 | Attachment invasion locus protein | VF |
| I3M_RS12760 () | 2180098..2183574 | - | 3477 | WP_000515131.1 | host specificity protein J | - |
| I3M_RS12765 () | 2183820..2184452 | - | 633 | WP_133253573.1 | tail assembly protein | - |
| I3M_RS12770 () | 2184398..2185141 | - | 744 | WP_000194802.1 | C40 family peptidase | - |
| I3M_RS12775 () | 2185152..2185850 | - | 699 | WP_001357740.1 | phage minor tail protein L | - |
| I3M_RS12780 () | 2185850..2186179 | - | 330 | WP_000847298.1 | phage tail protein | - |
| I3M_RS12785 () | 2186176..2188788 | - | 2613 | WP_106875217.1 | phage tail tape measure protein | - |
| I3M_RS12790 () | 2188769..2189182 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| I3M_RS12795 () | 2189209..2189631 | - | 423 | WP_000479045.1 | phage minor tail protein G | - |
| I3M_RS12800 () | 2189645..2190397 | - | 753 | WP_000235099.1 | Ig domain-containing protein | - |
| I3M_RS12805 () | 2190405..2190799 | - | 395 | Protein_2239 | phage tail protein | - |
| I3M_RS12810 () | 2190796..2191329 | - | 534 | WP_000975020.1 | phage tail protein | - |
| I3M_RS12815 () | 2191344..2191697 | - | 354 | WP_000752969.1 | head-tail joining protein | - |
| I3M_RS12820 () | 2191709..2192104 | - | 396 | WP_000158901.1 | DNA-packaging protein FI | - |
| I3M_RS12825 () | 2192146..2193171 | - | 1026 | WP_000063258.1 | major capsid protein | - |
| I3M_RS12830 () | 2193227..2193559 | - | 333 | WP_001295978.1 | head decoration protein | - |
| I3M_RS12835 () | 2193569..2194888 | - | 1320 | WP_000123254.1 | S49 family peptidase | - |
| I3M_RS12840 () | 2194869..2196470 | - | 1602 | WP_001301524.1 | phage portal protein | - |
| I3M_RS12845 () | 2196467..2196673 | - | 207 | WP_000198153.1 | gpW family protein | - |
| I3M_RS12850 () | 2196670..2198595 | - | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| I3M_RS12855 () | 2198570..2199115 | - | 546 | WP_000867498.1 | terminase small subunit | - |
| I3M_RS12865 () | 2199502..2199726 | + | 225 | WP_001431375.1 | YlcI/YnfO family protein | - |
| I3M_RS12870 () | 2199808..2200122 | - | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| I3M_RS31495 () | 2200650..2200835 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| I3M_RS12885 () | 2201057..2201166 | - | 110 | Protein_2253 | hypothetical protein | - |
| I3M_RS12890 () | 2201387..2201920 | - | 534 | WP_000992045.1 | lysozyme | - |
| I3M_RS12895 () | 2202432..2203223 | - | 792 | WP_001041949.1 | DUF1327 domain-containing protein | - |
| I3M_RS12900 () | 2203227..2203442 | - | 216 | WP_024165672.1 | class II holin family protein | - |
| I3M_RS12910 () | 2203881..2205731 | - | 1851 | WP_000023191.1 | SASA family carbohydrate esterase | - |
| I3M_RS12920 () | 2205958..2206213 | - | 256 | Protein_2258 | DUF3927 family protein | - |
| I3M_RS12925 () | 2206210..2206641 | - | 432 | WP_001299632.1 | tellurite resistance protein | - |
| I3M_RS12930 () | 2206831..2207040 | - | 210 | WP_000498121.1 | hypothetical protein | - |
| I3M_RS12935 () | 2207093..2207317 | - | 225 | WP_000735807.1 | hypothetical protein | - |
| I3M_RS12965 () | 2208162..2208914 | - | 753 | WP_001047111.1 | antitermination protein | - |
| I3M_RS12970 () | 2208928..2209977 | - | 1050 | WP_001375683.1 | DUF968 domain-containing protein | - |
| I3M_RS12975 () | 2209979..2210248 | - | 270 | WP_012817785.1 | hypothetical protein | - |
| I3M_RS12980 () | 2210302..2210529 | - | 228 | WP_001452497.1 | hypothetical protein | - |
| I3M_RS12985 () | 2210753..2211124 | + | 372 | WP_001217944.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I3M_RS12990 () | 2211117..2211434 | + | 318 | WP_000042395.1 | DNA-binding transcriptional regulator | - |
| I3M_RS12995 () | 2211537..2211692 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I3M_RS13005 () | 2211964..2212515 | - | 552 | WP_000211993.1 | ORF6N domain-containing protein | - |
| I3M_RS13010 () | 2212867..2213052 | - | 186 | WP_000215512.1 | hypothetical protein | - |
| I3M_RS13015 () | 2213112..2213873 | - | 762 | WP_000450895.1 | DUF1627 domain-containing protein | - |
| I3M_RS13020 () | 2213903..2214643 | - | 741 | WP_000790460.1 | ATP-binding protein | - |
| I3M_RS13025 () | 2214650..2215615 | - | 966 | WP_000054520.1 | hypothetical protein | - |
| I3M_RS13030 () | 2215596..2216117 | - | 522 | WP_000705368.1 | hypothetical protein | - |
| I3M_RS13035 () | 2216101..2216331 | - | 231 | WP_000920571.1 | dicB transcriptional regulator DicC | - |
| I3M_RS13040 () | 2216415..2216822 | + | 408 | WP_000379972.1 | helix-turn-helix domain-containing protein | - |
| I3M_RS13045 () | 2216989..2217141 | + | 153 | WP_000380321.1 | DUF1391 family protein | - |
| I3M_RS13050 () | 2217153..2217791 | + | 639 | WP_000394548.1 | hypothetical protein | - |
| I3M_RS13055 () | 2217792..2217974 | - | 183 | WP_032102321.1 | hypothetical protein | - |
| I3M_RS13065 () | 2218565..2218753 | + | 189 | WP_000449175.1 | cell division inhibitor | - |
| I3M_RS13070 () | 2218750..2218938 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| I3M_RS13075 () | 2219031..2221493 | + | 2463 | WP_000102117.1 | exonuclease | - |
| I3M_RS13080 () | 2221566..2221817 | + | 252 | WP_000005551.1 | excisionase family protein | - |
| I3M_RS13085 () | 2221837..2223132 | + | 1296 | WP_001206147.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I3M_RS13095 () | 2223320..2224339 | - | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| I3M_RS13100 () | 2224351..2225565 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| I3M_RS13110 () | 2225771..2226097 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| I3M_RS13115 () | 2226232..2226573 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| I3M_RS13120 () | 2226608..2227168 | + | 561 | WP_001138576.1 | spermidine N1-acetyltransferase | - |
| I3M_RS13125 () | 2227171..2227881 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| I3M_RS13130 () | 2227989..2228294 | + | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| I3M_RS13135 () | 2228493..2230918 | + | 2426 | Protein_2292 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|