MGE detailed information
MGE type: Prophage MGE length: 45992 bp
Accession: NZ_CP028116 Location: 1874205..1920196 Organism: Escherichia coli O26 str. RM8426 Replicon: chromosome
Accession: NZ_CP028116 Location: 1874205..1920196 Organism: Escherichia coli O26 str. RM8426 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3M_RS31950 () | 1870194..1870241 | + | 48 | WP_211180494.1 | protein YnaN | - |
| I3M_RS11055 () | 1870255..1871238 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| I3M_RS11065 () | 1871716..1873089 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| I3M_RS11070 () | 1873218..1874153 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| I3M_RS11075 () | 1874205..1875440 | - | 1236 | WP_000040851.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I3M_RS11080 () | 1875442..1875657 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| I3M_RS11085 () | 1875757..1875945 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1875761..1875939 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1875761..1875939 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1875761..1875939 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1875761..1875939 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| I3M_RS11090 () | 1875983..1876132 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| I3M_RS11095 () | 1876188..1876997 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| I3M_RS11100 () | 1876990..1879590 | - | 2601 | WP_000105151.1 | exodeoxyribonuclease VIII | - |
| I3M_RS11105 () | 1879692..1879967 | - | 276 | WP_000632297.1 | protein RacC | - |
| I3M_RS11110 () | 1880042..1880212 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| I3M_RS11115 () | 1880212..1880433 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| I3M_RS11120 () | 1880854..1881006 | - | 153 | WP_001427316.1 | DUF1391 family protein | - |
| I3M_RS11130 () | 1881305..1881724 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| I3M_RS11135 () | 1881804..1882058 | + | 255 | WP_001072343.1 | hypothetical protein | - |
| I3M_RS11140 () | 1882055..1882477 | + | 423 | WP_000693802.1 | hypothetical protein | - |
| I3M_RS11145 () | 1882541..1883020 | + | 480 | WP_001432368.1 | YdaU family protein | - |
| I3M_RS11155 () | 1884292..1884660 | + | 369 | Protein_1929 | DUF1376 domain-containing protein | - |
| I3M_RS11160 () | 1884667..1885413 | + | 747 | WP_000788968.1 | ATP-binding protein | - |
| I3M_RS11165 () | 1885436..1886197 | + | 762 | WP_000450672.1 | DUF1627 domain-containing protein | - |
| I3M_RS11170 () | 1886213..1886635 | + | 423 | WP_001151124.1 | DUF977 family protein | - |
| I3M_RS11175 () | 1886632..1886928 | + | 297 | WP_001266134.1 | DUF4406 domain-containing protein | - |
| I3M_RS11180 () | 1886925..1887386 | + | 462 | WP_001209480.1 | ead/Ea22-like family protein | - |
| I3M_RS11185 () | 1887364..1887720 | + | 357 | WP_000403777.1 | hypothetical protein | - |
| I3M_RS11190 () | 1887771..1887983 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| I3M_RS11195 () | 1888016..1888233 | + | 218 | Protein_1937 | DUF4014 family protein | - |
| I3M_RS11200 () | 1888235..1888498 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| I3M_RS11205 () | 1888509..1889378 | + | 870 | WP_000207986.1 | DUF551 domain-containing protein | - |
| I3M_RS11210 () | 1889494..1889598 | + | 105 | WP_001278454.1 | hypothetical protein | - |
| I3M_RS11220 () | 1889845..1890000 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I3M_RS11230 () | 1890168..1890445 | + | 278 | Protein_1942 | hypothetical protein | - |
| I3M_RS11235 () | 1890447..1891496 | + | 1050 | WP_001265080.1 | DUF968 domain-containing protein | - |
| I3M_RS11240 () | 1891509..1891883 | + | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I3M_RS11245 () | 1891880..1892701 | + | 822 | WP_000762928.1 | antitermination protein | - |
| I3M_RS11250 () | 1892938..1893300 | + | 363 | Protein_1946 | tellurite resistance TerB family protein | - |
| I3M_RS11255 () | 1893297..1893549 | + | 253 | Protein_1947 | DUF3927 family protein | - |
| I3M_RS11260 () | 1893871..1895721 | + | 1851 | WP_000143049.1 | SASA family carbohydrate esterase | - |
| I3M_RS11270 () | 1896160..1896375 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| I3M_RS11275 () | 1896375..1896872 | + | 498 | WP_000075132.1 | lysozyme RrrD | - |
| I3M_RS11280 () | 1896869..1897306 | + | 438 | WP_000092325.1 | lysis protein | - |
| I3M_RS11285 () | 1897456..1898073 | + | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| I3M_RS11295 () | 1898261..1898455 | - | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| I3M_RS11305 () | 1898844..1899389 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| I3M_RS11310 () | 1899364..1901289 | + | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| I3M_RS11315 () | 1901286..1901492 | + | 207 | WP_000198153.1 | gpW family protein | - |
| I3M_RS11320 () | 1901489..1903090 | + | 1602 | WP_001415980.1 | phage portal protein | - |
| I3M_RS11325 () | 1903071..1904390 | + | 1320 | WP_000123251.1 | S49 family peptidase | - |
| I3M_RS11330 () | 1904400..1904732 | + | 333 | WP_001365129.1 | head decoration protein | - |
| I3M_RS11335 () | 1904788..1905813 | + | 1026 | WP_000063258.1 | major capsid protein | - |
| I3M_RS11340 () | 1905855..1906250 | + | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| I3M_RS11345 () | 1906262..1906615 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| I3M_RS11350 () | 1906627..1907205 | + | 579 | WP_000975098.1 | phage tail protein | - |
| I3M_RS11355 () | 1907202..1907597 | + | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| I3M_RS11360 () | 1907605..1908357 | + | 753 | WP_000235067.1 | Ig domain-containing protein | - |
| I3M_RS11365 () | 1908371..1908802 | + | 432 | WP_000479086.1 | phage minor tail protein G | - |
| I3M_RS11370 () | 1908829..1909242 | + | 414 | WP_000533431.1 | phage tail assembly protein T | - |
| I3M_RS11375 () | 1909223..1911802 | + | 2580 | WP_000082321.1 | phage tail tape measure protein | - |
| I3M_RS11380 () | 1911799..1912128 | + | 330 | WP_000847304.1 | phage tail protein | - |
| I3M_RS11385 () | 1912128..1912826 | + | 699 | WP_001443841.1 | phage minor tail protein L | - |
| I3M_RS11390 () | 1912837..1913580 | + | 744 | WP_000194707.1 | C40 family peptidase | - |
| I3M_RS11395 () | 1913526..1914158 | + | 633 | WP_141079530.1 | tail assembly protein | - |
| I3M_RS11400 () | 1914404..1917880 | + | 3477 | WP_000515144.1 | host specificity protein J | - |
| I3M_RS11405 () | 1917948..1918547 | + | 600 | WP_001233130.1 | Outer membrane protein X | VF |
| I3M_RS11410 () | 1918612..1919925 | + | 1314 | WP_000268927.1 | ISNCY family transposase KIS | Transposase |
| I3M_RS11415 () | 1919927..1920196 | + | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3M_RS11420 () | 1920309..1920884 | + | 576 | WP_001131657.1 | DUF1076 domain-containing protein | - |
| I3M_RS11425 () | 1920957..1921586 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| I3M_RS11430 () | 1921668..1922309 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| I3M_RS11440 () | 1923250..1923684 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| I3M_RS11445 () | 1923825..1924958 | - | 1134 | WP_000837943.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|