MGE detailed information
MGE type: Mobilizable plasmid MGE length: 90123 bp
Accession: NZ_CP028115 Location: 1..90123 Organism: Escherichia coli O26 str. RM8426 Replicon: plasmid pRM8426
Accession: NZ_CP028115 Location: 1..90123 Organism: Escherichia coli O26 str. RM8426 Replicon: plasmid pRM8426
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3M_RS00005 () | 1..516 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| I3M_RS00010 () | 518..3514 | + | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| I3M_RS00015 () | 3564..5684 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| I3M_RS00020 () | 5688..7127 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| I3M_RS00025 () | 7194..7337 | + | 144 | Protein_4 | transcriptional regulator | - |
| I3M_RS00030 () | 7341..7532 | + | 192 | Protein_5 | lipid II-degrading bacteriocin | - |
| I3M_RS00035 () | 7540..7893 | - | 354 | WP_000864810.1 | colicin M immunity protein | - |
| I3M_RS00040 () | 8066..8848 | - | 783 | WP_001164205.1 | site-specific integrase | - |
| I3M_RS00045 () | 8850..9263 | - | 414 | WP_000465041.1 | hypothetical protein | - |
| I3M_RS00065 () | 9823..10053 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| I3M_RS00070 () | 10050..10466 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| I3M_RS00075 () | 10628..11173 | - | 546 | WP_001165114.1 | hypothetical protein | - |
| I3M_RS00080 () | 11241..12397 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| I3M_RS31690 () | 12438..12587 | - | 150 | WP_000955366.1 | hypothetical protein | - |
| I3M_RS00085 () | 13202..14062 | - | 861 | WP_000704534.1 | putative protein YcjY | VF |
| I3M_RS00090 () | 14190..14576 | + | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| I3M_RS00095 () | 14630..15304 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3M_RS00100 () | 15301..15648 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3M_RS00105 () | 15668..17220 | + | 1553 | Protein_18 | IS66 family transposase ISSfl3 | Transposase |
| I3M_RS00110 () | 17254..17613 | - | 360 | Protein_19 | DUF1449 family protein | - |
| I3M_RS00120 () | 17880..18545 | - | 666 | WP_000154135.1 | hypothetical protein | - |
| I3M_RS00125 () | 18686..19327 | - | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| I3M_RS00140 () | 20036..21067 | + | 1032 | WP_000907857.1 | replication initiation protein | - |
| I3M_RS00155 () | 22027..31527 | - | 9501 | WP_000581688.1 | Toxin B | VF |
| I3M_RS00160 () | 31642..31872 | - | 231 | WP_001443774.1 | transposase | - |
| I3M_RS31695 () | 31879..32287 | + | 409 | Protein_25 | IS3 family transposase | - |
| I3M_RS00170 () | 32354..33854 | - | 1501 | Protein_26 | IS66 family transposase | - |
| I3M_RS00175 () | 33866..35018 | - | 1153 | Protein_27 | IS3 family transposase | - |
| I3M_RS00180 () | 35089..35475 | - | 387 | Protein_28 | IS66 family transposase ISEc23 | Transposase |
| I3M_RS00185 () | 35562..35676 | + | 115 | Protein_29 | IS3 family transposase | - |
| I3M_RS00190 () | 35727..37237 | - | 1511 | Protein_30 | ISL3 family transposase | - |
| I3M_RS00195 () | 37857..38864 | - | 1008 | Protein_31 | IS91 family transposase ISEc37 | Transposase |
| I3M_RS00205 () | 39455..40642 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| I3M_RS00210 () | 40642..41007 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| I3M_RS00220 () | 41408..41797 | - | 390 | Protein_34 | IS91 family transposase ISMno23 | Transposase |
| I3M_RS00225 () | 41831..43383 | - | 1553 | Protein_35 | IS66 family transposase ISSfl3 | Transposase |
| I3M_RS00230 () | 43403..43750 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3M_RS00235 () | 43747..44421 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3M_RS00240 () | 44475..44702 | - | 228 | WP_001341442.1 | transposase | - |
| I3M_RS00245 () | 44865..45842 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| I3M_RS00250 () | 46648..47861 | + | 1214 | WP_162908515.1 | IS3 family transposase IS629 | Transposase |
| I3M_RS00265 () | 48034..50243 | + | 2210 | Protein_41 | Catalase-peroxidase | VF |
| I3M_RS00270 () | 50287..50676 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| I3M_RS00275 () | 50790..51557 | + | 768 | Protein_43 | IS3 family transposase | - |
| I3M_RS00280 () | 51637..52032 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| I3M_RS00285 () | 52032..52991 | - | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| I3M_RS00290 () | 53264..54166 | + | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| I3M_RS00295 () | 54163..54474 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| I3M_RS00300 () | 54550..55233 | + | 684 | WP_000086167.1 | DNA methylase | - |
| I3M_RS00305 () | 55233..55451 | + | 219 | WP_001443814.1 | hypothetical protein | - |
| I3M_RS00310 () | 55463..55897 | + | 435 | WP_000274418.1 | DUF1380 family protein | - |
| I3M_RS31700 () | 55942..56181 | + | 240 | Protein_51 | hypothetical protein | - |
| I3M_RS31705 () | 56176..56424 | + | 249 | Protein_52 | conjugation system SOS inhibitor PsiB | - |
| I3M_RS00320 () | 56421..57140 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| I3M_RS31710 () | 57137..57734 | + | 598 | Protein_54 | hypothetical protein | - |
| I3M_RS00335 () | 58196..58696 | + | 501 | WP_000117628.1 | antirestriction protein ArdA | - |
| I3M_RS31215 () | 58698..59318 | - | 621 | WP_162137195.1 | hypothetical protein | - |
| I3M_RS00350 () | 59424..59858 | + | 435 | WP_000218854.1 | hypothetical protein | - |
| I3M_RS00355 () | 59951..60217 | + | 267 | WP_001247865.1 | hypothetical protein | - |
| I3M_RS00360 () | 60282..61172 | + | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| I3M_RS00365 () | 61172..61417 | + | 246 | WP_012605149.1 | hypothetical protein | - |
| I3M_RS00370 () | 61448..61699 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| I3M_RS31715 () | 61758..62033 | - | 276 | WP_001431784.1 | hypothetical protein | - |
| I3M_RS00380 () | 62278..63126 | + | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| I3M_RS00385 () | 63212..63547 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| I3M_RS00390 () | 63779..64111 | + | 333 | WP_001291056.1 | hypothetical protein | - |
| I3M_RS00395 () | 64123..66843 | + | 2721 | WP_000991399.1 | Protein TraI | Relaxase |
| I3M_RS00400 () | 67064..67384 | - | 321 | WP_001341409.1 | hypothetical protein | - |
| I3M_RS31720 () | 67423..68111 | + | 689 | Protein_68 | IS3 family transposase IS600 | Transposase |
| I3M_RS00415 () | 69364..69777 | + | 414 | WP_136138333.1 | DUF1449 family protein | - |
| I3M_RS00420 () | 69825..70037 | - | 213 | Protein_71 | IS3 family transposase ISSfl10 | Transposase |
| I3M_RS31230 () | 70076..70333 | + | 258 | WP_000114001.1 | hypothetical protein | - |
| I3M_RS00430 () | 70581..74483 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| I3M_RS00435 () | 74926..75099 | - | 174 | Protein_74 | IS66 family transposase | - |
| I3M_RS00440 () | 75161..75373 | + | 213 | Protein_75 | IS3 family transposase ISSfl10 | Transposase |
| I3M_RS31235 () | 75421..75840 | - | 420 | WP_136139077.1 | DUF1449 family protein | - |
| I3M_RS00455 () | 75771..76445 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3M_RS00460 () | 76442..76789 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3M_RS00465 () | 76809..78361 | + | 1553 | Protein_79 | IS66 family transposase ISSfl3 | Transposase |
| I3M_RS00470 () | 78640..79827 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| I3M_RS00475 () | 79778..80191 | - | 414 | WP_001344870.1 | hypothetical protein | - |
| I3M_RS00485 () | 80428..80775 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| I3M_RS00490 () | 80825..82357 | + | 1533 | WP_000997978.1 | IS66 family transposase ISEc8 | Transposase |
| I3M_RS00495 () | 82420..82608 | - | 189 | Protein_84 | hypothetical protein | - |
| I3M_RS00500 () | 82661..83659 | - | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| I3M_RS00505 () | 83733..85454 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| I3M_RS00510 () | 85548..86654 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| I3M_RS00515 () | 86654..87475 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| I3M_RS00525 () | 88949..89601 | + | 653 | Protein_89 | IS3 family transposase IS629 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|