MGE detailed information
MGE type: Prophage MGE length: 60045 bp
Accession: NZ_CP028112 Location: 5117278..5177322 Organism: Escherichia coli O103 str. RM8385 Replicon: chromosome
Accession: NZ_CP028112 Location: 5117278..5177322 Organism: Escherichia coli O103 str. RM8385 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3Q_RS27595 () | 5112669..5113166 | + | 498 | WP_001295693.1 | chorismate lyase | - |
| I3Q_RS27600 () | 5113179..5114051 | + | 873 | WP_000455228.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| I3Q_RS27605 () | 5114206..5116629 | - | 2424 | WP_001301502.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| I3Q_RS27610 () | 5116800..5117168 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| I3Q_RS27615 () | 5117278..5117886 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| I3Q_RS27620 () | 5117959..5119284 | + | 1326 | WP_001298861.1 | MATE family efflux transporter DinF | - |
| I3Q_RS27625 () | 5119400..5119609 | + | 210 | WP_001030593.1 | CsbD family protein | - |
| I3Q_RS27630 () | 5119651..5120166 | - | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| I3Q_RS27640 () | 5120484..5121469 | + | 986 | Protein_5034 | DUF2713 domain-containing protein | - |
| I3Q_RS27645 () | 5121832..5121954 | + | 123 | WP_001300034.1 | hypothetical protein | - |
| I3Q_RS27650 () | 5122190..5122762 | + | 573 | WP_000458584.1 | SocA family protein | Antitoxin Detail |
| I3Q_RS27655 () | 5122792..5123178 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| I3Q_RS31790 () | 5123218..5123391 | + | 174 | WP_000390073.1 | hypothetical protein | - |
| I3Q_RS27660 () | 5123439..5123720 | - | 282 | WP_001093919.1 | pyocin activator PrtN family protein | - |
| I3Q_RS27665 () | 5123757..5124329 | - | 573 | WP_001061338.1 | 3'-5' exoribonuclease | - |
| I3Q_RS27670 () | 5124329..5124895 | - | 567 | WP_000628776.1 | DUF551 domain-containing protein | - |
| I3Q_RS31500 () | 5125229..5125407 | - | 179 | Protein_5042 | hypothetical protein | - |
| I3Q_RS27680 () | 5125409..5125957 | - | 549 | WP_000192143.1 | ead/Ea22-like family protein | - |
| I3Q_RS27685 () | 5125954..5126178 | - | 225 | WP_000015506.1 | hypothetical protein | - |
| I3Q_RS27690 () | 5126175..5126786 | - | 612 | WP_001242710.1 | hypothetical protein | - |
| I3Q_RS27695 () | 5126777..5127313 | - | 537 | WP_000008177.1 | 5'-deoxynucleotidase | - |
| I3Q_RS27700 () | 5127441..5128265 | - | 825 | WP_021522371.1 | YfdQ family protein | - |
| I3Q_RS27705 () | 5128331..5128693 | - | 363 | WP_000135680.1 | hypothetical protein | - |
| I3Q_RS27710 () | 5129151..5129804 | - | 654 | WP_000981537.1 | helix-turn-helix domain-containing protein | - |
| I3Q_RS27715 () | 5129900..5130097 | + | 198 | WP_001231956.1 | Cro/Cl family transcriptional regulator | - |
| I3Q_RS27720 () | 5130125..5130709 | + | 585 | WP_000514178.1 | hypothetical protein | - |
| I3Q_RS27725 () | 5130706..5131851 | + | 1146 | WP_044863395.1 | Rha family phage regulatory protein | - |
| I3Q_RS27730 () | 5131848..5132072 | + | 225 | WP_000620696.1 | hypothetical protein | - |
| I3Q_RS27735 () | 5132069..5132887 | + | 819 | WP_032343211.1 | helix-turn-helix domain-containing protein | - |
| I3Q_RS27740 () | 5132884..5133378 | + | 495 | WP_023441586.1 | PerC family transcriptional regulator | - |
| I3Q_RS27745 () | 5133378..5134031 | + | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| I3Q_RS27750 () | 5134028..5134354 | + | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| I3Q_RS27755 () | 5134351..5134740 | + | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I3Q_RS27760 () | 5134760..5135569 | + | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| I3Q_RS27765 () | 5135585..5136100 | + | 516 | WP_001223334.1 | hypothetical protein | - |
| I3Q_RS27770 () | 5136110..5137099 | + | 990 | WP_032317762.1 | DUF968 domain-containing protein | - |
| I3Q_RS27775 () | 5137113..5137865 | + | 753 | WP_001047129.1 | antitermination protein | - |
| I3Q_RS27790 () | 5138433..5139380 | + | 948 | WP_000691354.1 | Shiga toxin Stx1 subunit A | - |
| I3Q_RS27795 () | 5139390..5139659 | + | 270 | WP_000752026.1 | Shiga toxin Stx1a subunit B | - |
| I3Q_RS27805 () | 5140159..5140248 | + | 90 | WP_001486442.1 | DUF1737 domain-containing protein | - |
| I3Q_RS31795 () | 5140288..5142096 | + | 1809 | WP_109013703.1 | sialate O-acetylesterase | - |
| I3Q_RS27815 () | 5142232..5142411 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| I3Q_RS27820 () | 5142452..5142724 | + | 273 | WP_001290221.1 | DUF826 domain-containing protein | - |
| I3Q_RS27825 () | 5142801..5143016 | + | 216 | WP_001072901.1 | class II holin family protein | - |
| I3Q_RS27830 () | 5143021..5143554 | + | 534 | WP_000087733.1 | lysozyme | - |
| I3Q_RS27835 () | 5143828..5144523 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| I3Q_RS31525 () | 5144618..5144749 | + | 132 | WP_001280922.1 | hypothetical protein | - |
| I3Q_RS31535 () | 5144972..5145157 | + | 186 | WP_071529499.1 | Rz1 family lipoprotein | - |
| I3Q_RS27845 () | 5145396..5145947 | + | 552 | WP_001109019.1 | Rha family transcriptional regulator | - |
| I3Q_RS27860 () | 5146293..5146619 | + | 327 | WP_000828068.1 | TonB family protein | - |
| I3Q_RS27865 () | 5146751..5146951 | - | 201 | WP_000095741.1 | YlcI/YnfO family protein | - |
| I3Q_RS27870 () | 5146993..5147358 | + | 366 | WP_000829190.1 | HNH endonuclease | - |
| I3Q_RS27880 () | 5147647..5148210 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| I3Q_RS27885 () | 5148207..5149868 | + | 1662 | WP_001368653.1 | terminase large subunit | - |
| I3Q_RS27890 () | 5149932..5151869 | + | 1938 | WP_044165196.1 | phage major capsid protein | - |
| I3Q_RS27895 () | 5151914..5152135 | + | 222 | WP_001063096.1 | hypothetical protein | - |
| I3Q_RS27900 () | 5152081..5154664 | + | 2584 | Protein_5082 | phage portal protein | - |
| I3Q_RS27905 () | 5154661..5154987 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| I3Q_RS27910 () | 5154997..5155347 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| I3Q_RS27915 () | 5155344..5155790 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| I3Q_RS27920 () | 5155787..5156131 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| I3Q_RS27925 () | 5156198..5156914 | + | 717 | WP_001275476.1 | immunoglobulin domain-containing protein | - |
| I3Q_RS27930 () | 5156920..5157294 | + | 375 | WP_001030040.1 | phage tail assembly chaperone | - |
| I3Q_RS27935 () | 5157390..5157599 | + | 210 | WP_001513217.1 | DUF4035 domain-containing protein | - |
| I3Q_RS27940 () | 5157647..5160889 | + | 3243 | WP_106918336.1 | phage tail tape measure protein | - |
| I3Q_RS27945 () | 5160882..5161223 | + | 342 | WP_000807964.1 | phage tail protein | - |
| I3Q_RS27950 () | 5161223..5161921 | + | 699 | WP_001357740.1 | phage minor tail protein L | - |
| I3Q_RS27955 () | 5161927..5162670 | + | 744 | WP_025404499.1 | C40 family peptidase | - |
| I3Q_RS27960 () | 5162616..5163245 | + | 630 | WP_064761467.1 | tail assembly protein | - |
| I3Q_RS27965 () | 5163491..5166967 | + | 3477 | WP_109013704.1 | host specificity protein J | - |
| I3Q_RS27970 () | 5167034..5167633 | + | 600 | WP_001230429.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| I3Q_RS27975 () | 5167698..5169011 | + | 1314 | WP_106918319.1 | phage tail protein | - |
| I3Q_RS27980 () | 5169013..5169282 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3Q_RS27995 () | 5169423..5170297 | + | 875 | Protein_5099 | secretion protein EspS | - |
| I3Q_RS31540 () | 5170522..5171172 | - | 651 | WP_001121225.1 | type III secretion system effector NleG7 | - |
| I3Q_RS28010 () | 5171176..5171442 | - | 267 | Protein_5101 | hypothetical protein | - |
| I3Q_RS28015 () | 5171766..5172014 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| I3Q_RS28020 () | 5172076..5173173 | - | 1098 | WP_000332271.1 | site-specific integrase | - |
| I3Q_RS28025 () | 5173262..5174299 | + | 1038 | WP_000543823.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| I3Q_RS28030 () | 5174433..5174675 | + | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| I3Q_RS28035 () | 5174841..5175824 | - | 984 | WP_000235522.1 | quinone oxidoreductase | - |
| I3Q_RS28040 () | 5175907..5177322 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| I3Q_RS28045 () | 5177375..5178472 | + | 1098 | WP_001147329.1 | alanine racemase | - |
| I3Q_RS28050 () | 5178707..5179900 | + | 1194 | WP_000486997.1 | aromatic amino acid transaminase | - |
| I3Q_RS31800 () | 5180122..5180625 | - | 504 | WP_001027716.1 | hypothetical protein | - |
| I3Q_RS28060 () | 5181027..5181740 | + | 714 | WP_001375558.1 | acid phosphatase AphA | - |
| I3Q_RS28065 () | 5181851..5182267 | + | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|