MGE detailed information
MGE type: Prophage MGE length: 76790 bp
Accession: NZ_CP028112 Location: 1318750..1395539 Organism: Escherichia coli O103 str. RM8385 Replicon: chromosome
Accession: NZ_CP028112 Location: 1318750..1395539 Organism: Escherichia coli O103 str. RM8385 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3Q_RS06830 () | 1314833..1315474 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| I3Q_RS06835 () | 1315530..1316708 | - | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| I3Q_RS06840 () | 1316842..1317132 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| I3Q_RS06845 () | 1317199..1317555 | + | 357 | WP_001295500.1 | protein YebF | - |
| I3Q_RS06850 () | 1317882..1318541 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| I3Q_RS06855 () | 1318750..1320810 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| I3Q_RS06860 () | 1320807..1321469 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| I3Q_RS06865 () | 1321493..1322149 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| I3Q_RS06870 () | 1322251..1322481 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| I3Q_RS06875 () | 1322620..1322994 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| I3Q_RS06880 () | 1322998..1323870 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| I3Q_RS06885 () | 1323883..1324224 | + | 342 | WP_000976492.1 | YebY family protein | - |
| I3Q_RS06890 () | 1324617..1325693 | - | 1077 | WP_001189091.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| I3Q_RS06895 () | 1325659..1325940 | - | 282 | WP_001443927.1 | excisionase | - |
| I3Q_RS06900 () | 1326047..1326235 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 1326051..1326229 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 1326051..1326229 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 1326051..1326229 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 1326051..1326229 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| I3Q_RS06905 () | 1326228..1326422 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| I3Q_RS06910 () | 1326479..1327288 | - | 810 | WP_000166317.1 | recombination protein RecT | - |
| I3Q_RS06915 () | 1327281..1329932 | - | 2652 | WP_000105102.1 | exodeoxyribonuclease VIII | - |
| I3Q_RS06920 () | 1330031..1330306 | - | 276 | WP_001307773.1 | hypothetical protein | - |
| I3Q_RS06925 () | 1330380..1330556 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| I3Q_RS06930 () | 1330550..1330771 | - | 222 | WP_000560218.1 | killing protein KilR | - |
| I3Q_RS06935 () | 1331192..1331344 | - | 153 | WP_000379547.1 | DUF1391 family protein | - |
| I3Q_RS06940 () | 1331651..1332070 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| I3Q_RS06945 () | 1332167..1332409 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| I3Q_RS06950 () | 1332406..1332828 | + | 423 | WP_000702028.1 | hypothetical protein | - |
| I3Q_RS06955 () | 1332906..1333694 | + | 789 | WP_001427413.1 | hypothetical protein | - |
| I3Q_RS06960 () | 1333701..1334447 | + | 747 | WP_000788774.1 | ATP-binding protein | - |
| I3Q_RS06965 () | 1334470..1335240 | + | 771 | WP_000450657.1 | DUF1627 domain-containing protein | - |
| I3Q_RS06970 () | 1335256..1335687 | + | 432 | WP_001141109.1 | DUF977 family protein | - |
| I3Q_RS06975 () | 1335721..1336761 | - | 1041 | WP_000721512.1 | DNA cytosine methyltransferase | - |
| I3Q_RS06980 () | 1336785..1338614 | - | 1830 | WP_000107695.1 | AAA family ATPase | - |
| I3Q_RS06985 () | 1338760..1338915 | + | 156 | WP_023442312.1 | type I toxin-antitoxin system toxin HokD | - |
| I3Q_RS06995 () | 1339474..1340073 | + | 600 | WP_000940309.1 | DUF1367 family protein | - |
| I3Q_RS07000 () | 1340073..1340363 | + | 291 | WP_000228018.1 | DUF1364 domain-containing protein | - |
| I3Q_RS07005 () | 1340360..1340914 | + | 555 | WP_000640124.1 | DUF1133 family protein | - |
| I3Q_RS07015 () | 1341185..1341766 | + | 582 | WP_000211431.1 | ORF6N domain-containing protein | - |
| I3Q_RS07025 () | 1342010..1342207 | + | 198 | WP_000917767.1 | hypothetical protein | - |
| I3Q_RS07030 () | 1342342..1343055 | + | 714 | WP_000301785.1 | helix-turn-helix domain-containing protein | - |
| I3Q_RS07050 () | 1343505..1343936 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| I3Q_RS07055 () | 1343933..1344188 | + | 256 | Protein_1297 | DUF3927 family protein | - |
| I3Q_RS07060 () | 1344494..1346065 | - | 1572 | WP_000381395.1 | IS66 family transposase | - |
| I3Q_RS07065 () | 1346085..1346432 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| I3Q_RS07070 () | 1346432..1347109 | - | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
| I3Q_RS07080 () | 1347215..1349152 | + | 1938 | WP_109013669.1 | DUF1737 domain-containing protein | - |
| I3Q_RS07085 () | 1349288..1349467 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| I3Q_RS07090 () | 1349508..1349780 | + | 273 | WP_001290221.1 | DUF826 domain-containing protein | - |
| I3Q_RS07095 () | 1349857..1350072 | + | 216 | WP_001072901.1 | class II holin family protein | - |
| I3Q_RS07100 () | 1350077..1350610 | + | 534 | WP_000087733.1 | lysozyme | - |
| I3Q_RS07105 () | 1350884..1351579 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| I3Q_RS31230 () | 1351674..1351805 | + | 132 | WP_001280922.1 | hypothetical protein | - |
| I3Q_RS31240 () | 1352028..1352213 | + | 186 | WP_071529499.1 | Rz1 family lipoprotein | - |
| I3Q_RS07115 () | 1352452..1353003 | + | 552 | WP_001109019.1 | Rha family transcriptional regulator | - |
| I3Q_RS07130 () | 1353349..1353675 | + | 327 | WP_000828068.1 | TonB family protein | - |
| I3Q_RS07135 () | 1353807..1354007 | - | 201 | WP_000095741.1 | YlcI/YnfO family protein | - |
| I3Q_RS07140 () | 1354049..1354414 | + | 366 | WP_000829190.1 | HNH endonuclease | - |
| I3Q_RS07150 () | 1354701..1355264 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| I3Q_RS07155 () | 1355261..1356922 | + | 1662 | WP_001368653.1 | terminase large subunit | - |
| I3Q_RS07160 () | 1356986..1358923 | + | 1938 | WP_000173079.1 | phage major capsid protein | - |
| I3Q_RS07165 () | 1358968..1359189 | + | 222 | WP_001063110.1 | hypothetical protein | - |
| I3Q_RS07170 () | 1359135..1361719 | + | 2585 | Protein_1317 | phage portal protein | - |
| I3Q_RS07175 () | 1361716..1362042 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| I3Q_RS07180 () | 1362052..1362402 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| I3Q_RS07185 () | 1362399..1362845 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| I3Q_RS07190 () | 1362842..1363186 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| I3Q_RS07195 () | 1363252..1363968 | + | 717 | WP_001275471.1 | tail protein | - |
| I3Q_RS07200 () | 1363974..1364348 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| I3Q_RS07205 () | 1364444..1364653 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| I3Q_RS07210 () | 1364705..1367947 | + | 3243 | WP_106918332.1 | phage tail tape measure protein | - |
| I3Q_RS07215 () | 1367940..1368281 | + | 342 | WP_000807964.1 | phage tail protein | - |
| I3Q_RS07220 () | 1368281..1368979 | + | 699 | WP_001179486.1 | phage minor tail protein L | - |
| I3Q_RS07225 () | 1368990..1369733 | + | 744 | WP_009445180.1 | C40 family peptidase | - |
| I3Q_RS07230 () | 1369679..1370311 | + | 633 | WP_072280596.1 | tail assembly protein | - |
| I3Q_RS07240 () | 1370502..1371029 | - | 528 | WP_000649829.1 | superoxide dismutase family protein | - |
| I3Q_RS07245 () | 1371163..1374636 | + | 3474 | WP_106918354.1 | host specificity protein J | - |
| I3Q_RS07250 () | 1374704..1375303 | + | 600 | WP_001230428.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| I3Q_RS07255 () | 1375368..1376681 | + | 1314 | WP_109013670.1 | phage tail protein | - |
| I3Q_RS07260 () | 1376683..1376952 | + | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3Q_RS07265 () | 1377093..1377968 | + | 876 | WP_000491545.1 | hypothetical protein | - |
| I3Q_RS31245 () | 1378193..1378843 | - | 651 | WP_001121225.1 | type III secretion system effector NleG7 | - |
| I3Q_RS07280 () | 1378847..1379113 | - | 267 | Protein_1337 | hypothetical protein | - |
| I3Q_RS07285 () | 1379798..1380454 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| I3Q_RS07290 () | 1380455..1380646 | - | 192 | WP_001296140.1 | YebW family protein | - |
| I3Q_RS07295 () | 1380751..1380987 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| I3Q_RS07300 () | 1381105..1382544 | - | 1440 | WP_000057024.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| I3Q_RS07305 () | 1382624..1385257 | - | 2634 | WP_001299674.1 | lipid-binding membrane homeostasis protein YebT | - |
| I3Q_RS07310 () | 1385226..1386509 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| I3Q_RS07315 () | 1386639..1387136 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| I3Q_RS07320 () | 1387233..1387931 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| I3Q_RS07325 () | 1387951..1389999 | + | 2049 | WP_001427396.1 | carboxy terminal-processing peptidase | - |
| I3Q_RS07330 () | 1390191..1391072 | + | 882 | WP_000984517.1 | protease HtpX | - |
| I3Q_RS07335 () | 1391118..1392491 | - | 1374 | WP_001127210.1 | MFS transporter | - |
| I3Q_RS07340 () | 1392668..1393459 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| I3Q_RS07345 () | 1393602..1393841 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| I3Q_RS07350 () | 1394000..1394143 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| I3Q_RS07355 () | 1394218..1394505 | + | 288 | WP_001006866.1 | YebO family protein | - |
| I3Q_RS07365 () | 1395174..1395317 | + | 144 | WP_001295496.1 | YobF family protein | - |
| I3Q_RS07370 () | 1395330..1395539 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| I3Q_RS07375 () | 1395705..1396514 | + | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| I3Q_RS07380 () | 1396511..1397077 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| I3Q_RS07390 () | 1397506..1397964 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| I3Q_RS07395 () | 1398019..1398870 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| I3Q_RS07400 () | 1398883..1399683 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|