MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 83211 bp
Accession: NZ_CP028111 Location: 1..83211 Organism: Escherichia coli O121 str. RM8352 Replicon: plasmid pRM8352
Accession: NZ_CP028111 Location: 1..83211 Organism: Escherichia coli O121 str. RM8352 Replicon: plasmid pRM8352
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3S_RS28655 () | 1004..1645 | + | 642 | WP_000335844.1 | transcription termination factor NusG | - |
| I3S_RS28660 () | 1786..2451 | + | 666 | WP_000154135.1 | hypothetical protein | - |
| I3S_RS28670 () | 2845..3999 | - | 1155 | Protein_3 | IS3 family transposase | - |
| I3S_RS28675 () | 4066..4865 | - | 800 | Protein_4 | ISL3 family transposase | - |
| I3S_RS28680 () | 5485..6484 | - | 1000 | Protein_5 | transposase | - |
| I3S_RS28685 () | 7075..8262 | - | 1188 | WP_000937603.1 | IS91 family transposase | - |
| I3S_RS28690 () | 8262..8627 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| I3S_RS28700 () | 8864..9211 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| I3S_RS28705 () | 9261..10799 | + | 1539 | WP_101329731.1 | IS66 family transposase | - |
| I3S_RS28710 () | 10862..11050 | - | 189 | Protein_10 | hypothetical protein | - |
| I3S_RS28715 () | 11103..12101 | - | 999 | WP_012680945.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| I3S_RS28720 () | 12175..13896 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| I3S_RS28725 () | 13990..15096 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| I3S_RS28730 () | 15096..15917 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| I3S_RS28735 () | 17391..18043 | + | 653 | Protein_15 | IS3 family transposase | - |
| I3S_RS28745 () | 18566..19081 | + | 516 | WP_000839950.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| I3S_RS28750 () | 19083..22079 | + | 2997 | WP_000217745.1 | enterohemolysin EhxA | - |
| I3S_RS28755 () | 22129..24249 | + | 2121 | WP_000987096.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| I3S_RS28760 () | 24253..25692 | + | 1440 | WP_001213545.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| I3S_RS28765 () | 25759..25902 | + | 144 | Protein_20 | transcriptional regulator | - |
| I3S_RS28770 () | 25906..26097 | + | 192 | Protein_21 | lipid II-degrading bacteriocin | - |
| I3S_RS28775 () | 26105..26458 | - | 354 | WP_000864810.1 | colicin M immunity protein | - |
| I3S_RS28780 () | 26631..27413 | - | 783 | WP_001164205.1 | site-specific integrase | - |
| I3S_RS28785 () | 27415..27828 | - | 414 | WP_000465041.1 | hypothetical protein | - |
| I3S_RS28805 () | 28388..28618 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| I3S_RS28810 () | 28615..29031 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| I3S_RS28825 () | 29534..30746 | - | 1213 | Protein_27 | IS3 family transposase | - |
| I3S_RS28830 () | 30802..33051 | - | 2250 | Protein_28 | hypothetical protein | - |
| I3S_RS28835 () | 33069..33452 | - | 384 | WP_101329730.1 | hydrogenase | - |
| I3S_RS28840 () | 34023..34241 | - | 219 | Protein_30 | transposase | - |
| I3S_RS28845 () | 34343..35372 | + | 1030 | Protein_31 | IS630 family transposase | - |
| I3S_RS28850 () | 35397..35782 | - | 386 | Protein_32 | transposase | - |
| I3S_RS28855 () | 35775..35914 | - | 140 | Protein_33 | helix-turn-helix domain-containing protein | - |
| I3S_RS28860 () | 36233..36630 | + | 398 | Protein_34 | MarR family transcriptional regulator | - |
| I3S_RS28870 () | 36762..36992 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| I3S_RS28875 () | 37137..38293 | + | 1157 | WP_085948186.1 | IS3-like element IS600 family transposase | - |
| I3S_RS28880 () | 38380..38766 | + | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| I3S_RS28885 () | 38820..39494 | + | 675 | WP_001341423.1 | IS66 family insertion sequence hypothetical protein | - |
| I3S_RS28890 () | 39491..39838 | + | 348 | WP_000631725.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| I3S_RS28895 () | 39858..41414 | + | 1557 | WP_001066422.1 | IS66 family transposase | - |
| I3S_RS28900 () | 41693..42878 | - | 1186 | Protein_41 | IS91 family transposase | - |
| I3S_RS28905 () | 42878..43243 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| I3S_RS28915 () | 43644..44033 | - | 390 | Protein_43 | site-specific integrase | - |
| I3S_RS28920 () | 44067..45623 | - | 1557 | WP_001066422.1 | IS66 family transposase | - |
| I3S_RS28925 () | 45643..45990 | - | 348 | WP_000631725.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| I3S_RS28930 () | 45987..46661 | - | 675 | WP_001341423.1 | IS66 family insertion sequence hypothetical protein | - |
| I3S_RS28940 () | 46960..47937 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| I3S_RS28950 () | 48587..49641 | - | 1055 | Protein_48 | IS3-like element IS600 family transposase | - |
| I3S_RS28955 () | 49693..50460 | + | 768 | Protein_49 | IS3 family transposase | - |
| I3S_RS28960 () | 50540..50935 | - | 396 | WP_000445936.1 | plasmid partitioning/stability family protein | - |
| I3S_RS28965 () | 50935..51894 | - | 960 | WP_000921962.1 | plasmid segregation protein ParM | - |
| I3S_RS28970 () | 52167..53069 | + | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| I3S_RS28975 () | 53066..53377 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| I3S_RS28980 () | 53453..54136 | + | 684 | WP_000086163.1 | DNA methylase | - |
| I3S_RS28985 () | 54136..54354 | + | 219 | WP_001443814.1 | hypothetical protein | - |
| I3S_RS28990 () | 54366..54800 | + | 435 | WP_000274418.1 | DUF1380 family protein | - |
| I3S_RS29760 () | 54845..55084 | + | 240 | Protein_57 | hypothetical protein | - |
| I3S_RS29765 () | 55079..55327 | + | 249 | Protein_58 | conjugation system SOS inhibitor PsiB | - |
| I3S_RS29000 () | 55324..55728 | + | 405 | Protein_59 | plasmid SOS inhibition protein A | - |
| I3S_RS29005 () | 55834..56990 | + | 1157 | WP_085948186.1 | IS3-like element IS600 family transposase | - |
| I3S_RS29010 () | 57131..57343 | - | 213 | Protein_61 | transposase | - |
| I3S_RS29550 () | 57382..57639 | + | 258 | WP_000114001.1 | hypothetical protein | - |
| I3S_RS29025 () | 57887..61789 | - | 3903 | WP_001034100.1 | serine protease autotransporter EspP | - |
| I3S_RS29030 () | 62232..62405 | - | 174 | Protein_64 | IS66 family transposase | - |
| I3S_RS29035 () | 62467..62679 | + | 213 | Protein_65 | transposase | - |
| I3S_RS29040 () | 62727..63263 | - | 537 | WP_109024246.1 | DUF1449 family protein | - |
| I3S_RS29045 () | 63331..64487 | + | 1157 | WP_085948186.1 | IS3-like element IS600 family transposase | - |
| I3S_RS29050 () | 64535..65241 | + | 707 | Protein_68 | transposase | - |
| I3S_RS29060 () | 65493..65879 | + | 387 | Protein_69 | transposase | - |
| I3S_RS29065 () | 65950..66958 | + | 1009 | Protein_70 | IS3 family transposase | - |
| I3S_RS29070 () | 67016..68229 | + | 1214 | WP_101329727.1 | IS3 family transposase | - |
| I3S_RS29075 () | 68272..68433 | + | 162 | Protein_72 | IS3 family transposase | - |
| I3S_RS29080 () | 68427..69963 | + | 1537 | Protein_73 | IS66 family transposase | - |
| I3S_RS29085 () | 69991..71153 | + | 1163 | WP_101329732.1 | IS3 family transposase | - |
| I3S_RS29090 () | 71255..71663 | - | 409 | Protein_75 | IS3 family transposase | - |
| I3S_RS29095 () | 71670..71900 | + | 231 | WP_001443774.1 | transposase | - |
| I3S_RS29100 () | 72015..81515 | + | 9501 | WP_000581690.1 | toxin B | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|