MGE detailed information
MGE type: Prophage MGE length: 35123 bp
Accession: NZ_CP028110 Location: 3224280..3259402 Organism: Escherichia coli O121 str. RM8352 Replicon: chromosome
Accession: NZ_CP028110 Location: 3224280..3259402 Organism: Escherichia coli O121 str. RM8352 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3S_RS17130 () | 3219598..3220113 | + | 516 | WP_071532567.1 | secretion protein EspH | - |
| I3S_RS17135 () | 3220332..3220691 | - | 360 | WP_001005228.1 | Tir chaperone family protein | - |
| I3S_RS17140 () | 3220942..3221553 | + | 612 | WP_000492642.1 | hypothetical protein | - |
| I3S_RS17145 () | 3222000..3223616 | + | 1617 | WP_001121326.1 | type III secretion system LEE translocated intimin receptor Tir | - |
| I3S_RS17150 () | 3223749..3224219 | + | 471 | WP_000098786.1 | type III secretion system LEE chaperone CesT | - |
| I3S_RS17155 () | 3224280..3227126 | + | 2847 | WP_000627900.1 | Intimin | VF |
| I3S_RS17160 () | 3227506..3228726 | - | 1221 | WP_000953242.1 | hypothetical protein | VF |
| I3S_RS17165 () | 3228869..3229924 | + | 1056 | WP_001273456.1 | hypothetical protein | VF |
| I3S_RS17170 () | 3229982..3230560 | + | 579 | WP_000381551.1 | Secreted effector protein SseB | VF |
| I3S_RS17175 () | 3230573..3231715 | + | 1143 | WP_000935767.1 | hypothetical protein | VF |
| I3S_RS17180 () | 3231736..3232680 | + | 945 | WP_001092013.1 | Protein EaeB | VF |
| I3S_RS17185 () | 3232687..3233094 | + | 408 | WP_000228587.1 | hypothetical protein | VF |
| I3S_RS17190 () | 3233131..3233352 | + | 222 | WP_001053840.1 | hypothetical protein | VF |
| I3S_RS17195 () | 3233358..3233636 | + | 279 | WP_000245867.1 | hypothetical protein | VF |
| I3S_RS17200 () | 3233852..3234736 | + | 885 | WP_001368749.1 | Secreted effector protein EspF(U) | VF |
| I3S_RS17205 () | 3234982..3235566 | - | 585 | WP_001111205.1 | hypothetical protein | VF |
| I3S_RS17210 () | 3235764..3236402 | + | 639 | WP_001145628.1 | hypothetical protein | VF |
| I3S_RS17215 () | 3236694..3238058 | + | 1365 | WP_000953521.1 | E3 ubiquitin-protein ligase SspH1 | VF |
| I3S_RS17230 () | 3240573..3241286 | - | 714 | Protein_3132 | DUF4942 domain-containing protein | - |
| I3S_RS17235 () | 3241362..3242036 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3S_RS17240 () | 3242033..3242380 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3S_RS17245 () | 3242400..3243956 | + | 1557 | WP_001066419.1 | IS66 family transposase ISSfl3 | Transposase |
| I3S_RS29675 () | 3243974..3244132 | - | 159 | WP_000014512.1 | hypothetical protein | - |
| I3S_RS17250 () | 3244217..3244414 | - | 198 | WP_000839246.1 | DUF957 domain-containing protein | - |
| I3S_RS17255 () | 3244426..3244914 | - | 489 | WP_000777666.1 | hypothetical protein | - |
| I3S_RS17260 () | 3244911..3245288 | - | 378 | WP_000854916.1 | TA system toxin CbtA family protein | Toxin Detail |
| I3S_RS17265 () | 3245335..3245709 | - | 375 | WP_024174207.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| I3S_RS17270 () | 3245872..3246093 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| I3S_RS17275 () | 3246162..3246296 | - | 135 | Protein_3142 | hypothetical protein | - |
| I3S_RS17280 () | 3246337..3247534 | + | 1198 | Protein_3143 | IS3 family transposase | - |
| I3S_RS17285 () | 3247612..3247962 | - | 351 | WP_000624681.1 | IS66 family transposase ISEc47 | Transposase |
| I3S_RS17290 () | 3247959..3248384 | - | 426 | WP_000422707.1 | IS66 family transposase ISEc23 | Transposase |
| I3S_RS17295 () | 3248516..3248869 | - | 354 | Protein_3146 | IS256 family transposase ISEic2 | Transposase |
| I3S_RS29350 () | 3248907..3249373 | + | 467 | Protein_3147 | IS3 family transposase IS629 | Transposase |
| I3S_RS29355 () | 3249378..3249647 | - | 270 | Protein_3148 | transposase | - |
| I3S_RS17305 () | 3249889..3250131 | + | 243 | WP_096855415.1 | transposase | - |
| I3S_RS17310 () | 3250160..3251716 | - | 1557 | WP_001066422.1 | IS66 family transposase ISSfl3 | Transposase |
| I3S_RS17315 () | 3251736..3252083 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3S_RS17320 () | 3252080..3252754 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3S_RS17325 () | 3252863..3254401 | + | 1539 | WP_000997985.1 | IS66 family transposase ISEc8 | Transposase |
| I3S_RS17330 () | 3254518..3255783 | - | 1266 | WP_001218841.1 | Prophage integrase IntS ; Integrase | Integrase |
| I3S_RS17340 () | 3256162..3256869 | - | 708 | WP_000234502.1 | DUF554 domain-containing protein | - |
| I3S_RS29860 () | 3257022..3257105 | + | 84 | WP_212591416.1 | hypothetical protein | - |
| I3S_RS17350 () | 3257267..3259402 | + | 2136 | WP_001370231.1 | ornithine decarboxylase | - |
| I3S_RS17355 () | 3259451..3260707 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| I3S_RS17360 () | 3260909..3261988 | - | 1080 | WP_001298916.1 | membrane-bound lytic murein transglycosylase MltC | - |
| I3S_RS17365 () | 3262053..3262328 | - | 276 | WP_000091700.1 | oxidative damage protection protein | - |
| I3S_RS17370 () | 3262356..3263408 | - | 1053 | WP_001298922.1 | A/G-specific adenine glycosylase | - |
| I3S_RS17380 () | 3263569..3264288 | + | 720 | WP_000786911.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|