MGE detailed information
MGE type: Prophage MGE length: 54019 bp
Accession: NZ_CP028110 Location: 1908596..1962614 Organism: Escherichia coli O121 str. RM8352 Replicon: chromosome
Accession: NZ_CP028110 Location: 1908596..1962614 Organism: Escherichia coli O121 str. RM8352 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3S_RS10150 () | 1906033..1907166 | + | 1134 | WP_000837940.1 | porin OmpN | - |
| I3S_RS10155 () | 1907307..1907741 | + | 435 | WP_001295593.1 | universal stress protein UspF | - |
| I3S_RS10160 () | 1908596..1909752 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| I3S_RS10165 () | 1909801..1910814 | - | 1014 | WP_122993102.1 | hypothetical protein | VF |
| I3S_RS10175 () | 1911217..1911486 | - | 270 | WP_001023356.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3S_RS10180 () | 1911488..1912801 | - | 1314 | WP_032212629.1 | ISNCY family transposase KIS | Transposase |
| I3S_RS10185 () | 1912866..1913465 | - | 600 | WP_001230471.1 | Outer membrane protein X | VF |
| I3S_RS10190 () | 1913533..1917006 | - | 3474 | WP_032212631.1 | host specificity protein J | - |
| I3S_RS10195 () | 1917246..1917875 | - | 630 | WP_136865629.1 | tail assembly protein | - |
| I3S_RS10200 () | 1917821..1918562 | - | 742 | Protein_1868 | C40 family peptidase | - |
| I3S_RS10210 () | 1918573..1919271 | - | 699 | WP_032212713.1 | phage minor tail protein L | - |
| I3S_RS10215 () | 1919271..1919600 | - | 330 | WP_000847298.1 | phage tail protein | - |
| I3S_RS10220 () | 1919597..1921123 | - | 1527 | WP_109024245.1 | phage tail tape measure protein | - |
| I3S_RS10225 () | 1921135..1921467 | - | 333 | WP_109024233.1 | phage tail tape measure protein | - |
| I3S_RS10230 () | 1921418..1922599 | - | 1182 | WP_199917474.1 | phage tail assembly protein T | - |
| I3S_RS10235 () | 1922626..1923048 | - | 423 | WP_000479045.1 | phage minor tail protein G | - |
| I3S_RS10240 () | 1923062..1923813 | - | 752 | Protein_1875 | Ig domain-containing protein | - |
| I3S_RS10245 () | 1923821..1924216 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| I3S_RS10250 () | 1924213..1924790 | - | 578 | Protein_1877 | phage tail protein | - |
| I3S_RS10255 () | 1924802..1925155 | - | 354 | WP_000753019.1 | head-tail joining protein | - |
| I3S_RS10260 () | 1925167..1925562 | - | 396 | WP_000158899.1 | DNA-packaging protein FI | - |
| I3S_RS10265 () | 1925603..1926627 | - | 1025 | Protein_1880 | major capsid protein | - |
| I3S_RS10270 () | 1926683..1927015 | - | 333 | WP_001299443.1 | head decoration protein | - |
| I3S_RS29615 () | 1927025..1927588 | - | 564 | WP_199917476.1 | capsid protein | - |
| I3S_RS29620 () | 1927518..1928342 | - | 825 | WP_199917475.1 | S49 family peptidase | - |
| I3S_RS10280 () | 1928323..1929922 | - | 1600 | Protein_1884 | phage portal protein | - |
| I3S_RS10285 () | 1929919..1930125 | - | 207 | WP_000198153.1 | gpW family protein | - |
| I3S_RS10290 () | 1930122..1932046 | - | 1925 | Protein_1886 | phage terminase large subunit family protein | - |
| I3S_RS10295 () | 1932021..1932566 | - | 546 | WP_000867498.1 | terminase small subunit | - |
| I3S_RS10305 () | 1932953..1933177 | + | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| I3S_RS10310 () | 1933259..1933573 | - | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| I3S_RS29310 () | 1934099..1934284 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| I3S_RS29315 () | 1934507..1934653 | - | 147 | WP_000539795.1 | hypothetical protein | - |
| I3S_RS10325 () | 1934653..1935222 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| I3S_RS10330 () | 1935493..1936026 | - | 534 | WP_000992088.1 | lysozyme | - |
| I3S_RS10335 () | 1936077..1936421 | - | 345 | WP_000731221.1 | YdfR family protein | - |
| I3S_RS10340 () | 1936426..1936641 | - | 216 | WP_000284522.1 | class II holin family protein | - |
| I3S_RS10345 () | 1936791..1938653 | - | 1863 | WP_000143128.1 | DUF1737 domain-containing protein | - |
| I3S_RS10370 () | 1939476..1939628 | - | 153 | WP_001339373.1 | restriction endonuclease subunit M | - |
| I3S_RS10380 () | 1939938..1940303 | - | 366 | Protein_1898 | antitermination protein | - |
| I3S_RS10385 () | 1940313..1941489 | - | 1177 | Protein_1899 | IS3 family transposase | - |
| I3S_RS10390 () | 1941564..1941950 | - | 387 | Protein_1900 | antitermination protein | - |
| I3S_RS10395 () | 1941964..1942953 | - | 990 | WP_001370152.1 | DUF968 domain-containing protein | - |
| I3S_RS10400 () | 1943005..1943262 | - | 258 | WP_001370224.1 | hypothetical protein | - |
| I3S_RS10405 () | 1943259..1944659 | - | 1401 | WP_000203855.1 | replicative DNA helicase | - |
| I3S_RS10410 () | 1944656..1945555 | - | 900 | WP_000988265.1 | ATP-binding protein | - |
| I3S_RS10415 () | 1945566..1946390 | - | 825 | WP_000061545.1 | helix-turn-helix domain-containing protein | - |
| I3S_RS29625 () | 1946387..1946611 | - | 225 | WP_000618008.1 | hypothetical protein | - |
| I3S_RS10425 () | 1946608..1946802 | - | 195 | WP_000626861.1 | hypothetical protein | - |
| I3S_RS10430 () | 1946799..1947965 | - | 1167 | WP_001087349.1 | Rha family phage regulatory protein | - |
| I3S_RS10435 () | 1947962..1948546 | - | 585 | WP_000514175.1 | hypothetical protein | - |
| I3S_RS10440 () | 1948574..1948771 | - | 198 | WP_001231956.1 | Cro/Cl family transcriptional regulator | - |
| I3S_RS10445 () | 1948867..1949520 | + | 654 | WP_000981537.1 | helix-turn-helix domain-containing protein | - |
| I3S_RS10455 () | 1949978..1950340 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| I3S_RS10460 () | 1950406..1951230 | + | 825 | WP_000081294.1 | YfdQ family protein | - |
| I3S_RS10465 () | 1951358..1951516 | + | 159 | Protein_1914 | 5'-deoxynucleotidase | - |
| I3S_RS10470 () | 1951569..1952782 | + | 1214 | WP_101329727.1 | IS3 family transposase IS1203 | Transposase |
| I3S_RS10475 () | 1952873..1953208 | + | 336 | WP_000543621.1 | hypothetical protein | - |
| I3S_RS10480 () | 1953199..1953549 | + | 351 | WP_001242740.1 | hypothetical protein | - |
| I3S_RS10485 () | 1953546..1954019 | + | 474 | WP_000145671.1 | class I SAM-dependent methyltransferase | - |
| I3S_RS10490 () | 1954166..1954633 | + | 468 | WP_000829413.1 | hypothetical protein | - |
| I3S_RS10495 () | 1954635..1954826 | + | 192 | WP_001014294.1 | hypothetical protein | - |
| I3S_RS10500 () | 1954829..1955563 | + | 735 | WP_001094871.1 | DUF551 domain-containing protein | - |
| I3S_RS10505 () | 1955563..1956135 | + | 573 | WP_001061339.1 | 3'-5' exoribonuclease | - |
| I3S_RS10510 () | 1956172..1956453 | + | 282 | WP_001093921.1 | pyocin activator PrtN family protein | - |
| I3S_RS29630 () | 1956501..1956674 | - | 174 | WP_000390069.1 | hypothetical protein | - |
| I3S_RS10515 () | 1956714..1957100 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| I3S_RS10520 () | 1957130..1957702 | - | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| I3S_RS10525 () | 1957937..1958059 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| I3S_RS10530 () | 1958422..1959408 | - | 987 | WP_000912572.1 | DUF2713 domain-containing protein | - |
| I3S_RS10535 () | 1959726..1960241 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| I3S_RS10540 () | 1960283..1960492 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| I3S_RS10545 () | 1960608..1961933 | - | 1326 | WP_001370252.1 | MATE family efflux transporter DinF | - |
| I3S_RS10550 () | 1962006..1962614 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| I3S_RS10555 () | 1962724..1963092 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| I3S_RS10560 () | 1963263..1965686 | + | 2424 | WP_000017353.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| I3S_RS10565 () | 1965841..1966713 | - | 873 | WP_000455240.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| I3S_RS10570 () | 1966726..1967223 | - | 498 | WP_001295693.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|