MGE detailed information
MGE type: Prophage MGE length: 50306 bp
Accession: NZ_CP028110 Location: 1281317..1331622 Organism: Escherichia coli O121 str. RM8352 Replicon: chromosome
Accession: NZ_CP028110 Location: 1281317..1331622 Organism: Escherichia coli O121 str. RM8352 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3S_RS06570 () | 1277224..1278423 | + | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| I3S_RS06575 () | 1278416..1279117 | + | 702 | WP_001033695.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| I3S_RS06580 () | 1279117..1280361 | + | 1245 | WP_001251388.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| I3S_RS06585 () | 1280390..1281301 | + | 912 | WP_000291280.1 | N-acetylglucosamine kinase | - |
| I3S_RS06590 () | 1281317..1282138 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| I3S_RS06595 () | 1282294..1283340 | - | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| I3S_RS06600 () | 1283337..1284131 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| I3S_RS06605 () | 1284440..1284643 | + | 204 | WP_000824186.1 | hypothetical protein | - |
| I3S_RS06610 () | 1284621..1285088 | + | 468 | WP_001113310.1 | DUF2335 domain-containing protein | - |
| I3S_RS06615 () | 1285165..1286283 | - | 1119 | WP_000074974.1 | hypothetical protein ; Integrase | Integrase |
| I3S_RS06620 () | 1286252..1286521 | - | 270 | WP_000003742.1 | excisionase | - |
| I3S_RS06625 () | 1286583..1289054 | - | 2472 | WP_000048560.1 | exonuclease | - |
| I3S_RS06630 () | 1289178..1289399 | - | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| I3S_RS06640 () | 1290112..1290411 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| I3S_RS06650 () | 1290764..1291042 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I3S_RS06655 () | 1291044..1291235 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| I3S_RS06660 () | 1291256..1291627 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| I3S_RS06665 () | 1291725..1292027 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| I3S_RS06670 () | 1292024..1292449 | + | 426 | WP_000693944.1 | Rha family transcriptional regulator | - |
| I3S_RS06675 () | 1292472..1293434 | + | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| I3S_RS06680 () | 1293475..1293897 | + | 423 | WP_001151187.1 | DUF977 family protein | - |
| I3S_RS06685 () | 1294003..1294215 | + | 213 | WP_000935423.1 | hypothetical protein | - |
| I3S_RS06690 () | 1294248..1294466 | + | 219 | WP_000209148.1 | DUF4014 family protein | - |
| I3S_RS29195 () | 1294468..1294626 | + | 159 | WP_001370098.1 | hypothetical protein | - |
| I3S_RS06695 () | 1294630..1296186 | - | 1557 | WP_001066422.1 | IS66 family transposase ISSfl3 | Transposase |
| I3S_RS06700 () | 1296206..1296553 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3S_RS06705 () | 1296550..1297224 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3S_RS06710 () | 1297230..1297448 | + | 219 | WP_136865621.1 | hypothetical protein | - |
| I3S_RS06715 () | 1297459..1298328 | + | 870 | WP_000208016.1 | DUF551 domain-containing protein | - |
| I3S_RS06720 () | 1298444..1298548 | + | 105 | WP_001278454.1 | hypothetical protein | - |
| I3S_RS06730 () | 1298794..1298949 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| I3S_RS06735 () | 1299067..1299414 | + | 348 | WP_000756560.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| I3S_RS06740 () | 1299535..1299807 | + | 273 | WP_000046991.1 | hypothetical protein | - |
| I3S_RS06745 () | 1299809..1300858 | + | 1050 | WP_001265272.1 | DUF968 domain-containing protein | - |
| I3S_RS06750 () | 1300871..1301245 | + | 375 | WP_001121083.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I3S_RS06755 () | 1301242..1302063 | + | 822 | WP_000762899.1 | antitermination protein | - |
| I3S_RS06760 () | 1302289..1302486 | + | 198 | WP_000917750.1 | hypothetical protein | - |
| I3S_RS06765 () | 1302637..1303695 | + | 1059 | WP_000935558.1 | site-specific DNA-methyltransferase | - |
| I3S_RS06785 () | 1304155..1304586 | + | 432 | Protein_1231 | tellurite resistance TerB family protein | - |
| I3S_RS06790 () | 1304583..1304714 | + | 132 | WP_001344632.1 | DUF3927 family protein | - |
| I3S_RS06795 () | 1305157..1307007 | + | 1851 | WP_032212668.1 | SASA family carbohydrate esterase | - |
| I3S_RS06805 () | 1307445..1307660 | + | 216 | WP_053897820.1 | class II holin family protein | - |
| I3S_RS06830 () | 1310542..1310814 | - | 273 | WP_000138558.1 | hypothetical protein | - |
| I3S_RS06840 () | 1310974..1311507 | + | 534 | WP_001003112.1 | lysozyme | - |
| I3S_RS29205 () | 1312154..1312360 | + | 207 | WP_001208682.1 | Rz1 family lipoprotein | - |
| I3S_RS06855 () | 1312425..1312649 | + | 225 | WP_000735655.1 | hypothetical protein | - |
| I3S_RS06870 () | 1314273..1314413 | + | 141 | WP_000347013.1 | hypothetical protein | - |
| I3S_RS06875 () | 1314543..1314656 | - | 114 | WP_032208049.1 | DUF3950 domain-containing protein | - |
| I3S_RS06880 () | 1314724..1315058 | + | 335 | Protein_1244 | IS3 family transposase ISSfl10 | Transposase |
| I3S_RS06885 () | 1315124..1316280 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| I3S_RS06890 () | 1316273..1317016 | + | 744 | WP_077760344.1 | phage portal protein | - |
| I3S_RS06895 () | 1317013..1317339 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| I3S_RS06900 () | 1317350..1317700 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| I3S_RS06905 () | 1317697..1318143 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| I3S_RS06910 () | 1318140..1318484 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| I3S_RS06915 () | 1318550..1319266 | + | 717 | WP_001275483.1 | immunoglobulin domain-containing protein | - |
| I3S_RS06920 () | 1319281..1319655 | + | 375 | WP_000710949.1 | phage tail assembly chaperone | - |
| I3S_RS06925 () | 1319751..1319960 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| I3S_RS06930 () | 1320012..1323254 | + | 3243 | WP_000212947.1 | phage tail tape measure protein | - |
| I3S_RS06935 () | 1323247..1323588 | + | 342 | WP_000807954.1 | phage tail protein | - |
| I3S_RS06940 () | 1323588..1324286 | + | 699 | WP_032212666.1 | phage minor tail protein L | - |
| I3S_RS06945 () | 1324297..1325041 | + | 745 | Protein_1257 | C40 family peptidase | - |
| I3S_RS06950 () | 1324987..1325614 | + | 628 | Protein_1258 | tail assembly protein | - |
| I3S_RS06955 () | 1325854..1329329 | + | 3476 | Protein_1259 | host specificity protein J | - |
| I3S_RS06960 () | 1329398..1329973 | + | 576 | WP_024174257.1 | Attachment invasion locus protein | VF |
| I3S_RS06965 () | 1330038..1331351 | + | 1314 | WP_032212660.1 | ISNCY family transposase KIS | Transposase |
| I3S_RS06970 () | 1331353..1331622 | + | 270 | WP_032212659.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3S_RS06975 () | 1331748..1332500 | - | 753 | WP_012817749.1 | type III effector | - |
| I3S_RS06990 () | 1333617..1334734 | + | 1118 | Protein_1264 | hydrogenase 1 small subunit | - |
| I3S_RS06995 () | 1334731..1336524 | + | 1794 | WP_000107384.1 | Ni/Fe-hydrogenase large subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|