MGE detailed information
MGE type: Genomic_island MGE length: 65326 bp
Accession: NZ_CP027766 Location: 3545280..3610605 Organism: Escherichia coli strain 2013C-3342 Replicon: chromosome
Accession: NZ_CP027766 Location: 3545280..3610605 Organism: Escherichia coli strain 2013C-3342 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M85_RS19320 () | 3540895..3541233 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| C7M85_RS19325 () | 3541209..3542906 | + | 1698 | WP_000068905.1 | protein-disulfide reductase DsbD | - |
| C7M85_RS19330 () | 3542943..3543518 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| C7M85_RS19340 () | 3543898..3545163 | + | 1266 | WP_044805839.1 | integrase arm-type DNA-binding domain-containing protein | - |
| C7M85_RS19345 () | 3545280..3545900 | - | 621 | Protein_3542 | IS66 family transposase ISEc8 | Transposase |
| C7M85_RS19355 () | 3546154..3546828 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C7M85_RS19360 () | 3546825..3547172 | + | 348 | WP_025380681.1 | IS66 family transposase ISSfl3 | Transposase |
| C7M85_RS19365 () | 3547192..3548561 | + | 1370 | Protein_3545 | IS66 family transposase ISSfl3 | Transposase |
| C7M85_RS19370 () | 3548566..3549357 | - | 792 | Protein_3546 | NERD domain-containing protein | - |
| C7M85_RS19375 () | 3549493..3549723 | - | 231 | Protein_3547 | hypothetical protein | VF |
| C7M85_RS19385 () | 3549872..3550852 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| C7M85_RS19400 () | 3551080..3551211 | + | 132 | Protein_3549 | integrase core domain-containing protein | - |
| C7M85_RS19405 () | 3551539..3552684 | + | 1146 | WP_001358534.1 | hypothetical protein | VF |
| C7M85_RS19410 () | 3552812..3553630 | + | 819 | WP_000823902.1 | YjiK family protein | - |
| C7M85_RS19415 () | 3553771..3554097 | - | 327 | Protein_3552 | integrase core domain-containing protein | - |
| C7M85_RS19420 () | 3554258..3555211 | - | 954 | Protein_3553 | IS630 family transposase ISEc33 | Transposase |
| C7M85_RS19425 () | 3555547..3556221 | - | 675 | WP_000609741.1 | hypothetical protein | VF |
| C7M85_RS19430 () | 3556270..3557260 | - | 991 | Protein_3555 | hypothetical protein | VF |
| C7M85_RS19435 () | 3557501..3557650 | - | 150 | Protein_3556 | IS1 family transposase | - |
| C7M85_RS19440 () | 3557869..3559518 | - | 1650 | WP_106883950.1 | hypothetical protein | VF |
| C7M85_RS19450 () | 3560310..3561565 | - | 1256 | Protein_3558 | IS4 family transposase | - |
| C7M85_RS30590 () | 3561743..3561916 | + | 174 | WP_001453071.1 | hypothetical protein | - |
| C7M85_RS19460 () | 3562487..3562642 | + | 156 | Protein_3560 | Ail/Lom family protein | - |
| C7M85_RS19470 () | 3564351..3565019 | - | 669 | WP_106883949.1 | hypothetical protein | VF |
| C7M85_RS19475 () | 3565215..3565493 | - | 279 | WP_000245865.1 | hypothetical protein | VF |
| C7M85_RS19480 () | 3565499..3565720 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| C7M85_RS19485 () | 3565755..3566162 | - | 408 | WP_000228585.1 | hypothetical protein | VF |
| C7M85_RS19490 () | 3566169..3567131 | - | 963 | WP_001091995.1 | hypothetical protein | VF |
| C7M85_RS19495 () | 3567152..3568294 | - | 1143 | WP_106883948.1 | hypothetical protein | VF |
| C7M85_RS19500 () | 3568307..3568885 | - | 579 | WP_000380337.1 | hypothetical protein | VF |
| C7M85_RS19505 () | 3568943..3569998 | - | 1056 | WP_001273452.1 | hypothetical protein | VF |
| C7M85_RS19510 () | 3570141..3571361 | + | 1221 | WP_106883947.1 | hypothetical protein | VF |
| C7M85_RS19515 () | 3571649..3574456 | - | 2808 | WP_106883946.1 | hypothetical protein | VF |
| C7M85_RS19520 () | 3574514..3574984 | - | 471 | WP_000098792.1 | hypothetical protein | VF |
| C7M85_RS19525 () | 3575119..3576774 | - | 1656 | WP_044805846.1 | hypothetical protein | VF |
| C7M85_RS19530 () | 3577105..3577716 | - | 612 | WP_000492696.1 | hypothetical protein | VF |
| C7M85_RS19535 () | 3577981..3578343 | + | 363 | WP_044805847.1 | hypothetical protein | VF |
| C7M85_RS19540 () | 3578522..3579031 | - | 510 | WP_001444602.1 | hypothetical protein | VF |
| C7M85_RS19545 () | 3579062..3579979 | - | 918 | WP_000803681.1 | hypothetical protein | VF |
| C7M85_RS19550 () | 3579942..3580358 | - | 417 | WP_001444601.1 | type III secretion system LEE needle length regulator EscP | - |
| C7M85_RS19555 () | 3580351..3580671 | - | 321 | WP_001062955.1 | hypothetical protein | VF |
| C7M85_RS19560 () | 3580731..3582071 | - | 1341 | WP_000622549.1 | ATP synthase subunit beta | VF |
| C7M85_RS19565 () | 3582055..3584082 | - | 2028 | WP_044805848.1 | hypothetical protein | VF |
| C7M85_RS19570 () | 3584079..3584432 | - | 354 | WP_001691072.1 | hypothetical protein | VF |
| C7M85_RS19575 () | 3584617..3584913 | + | 297 | WP_044805850.1 | hypothetical protein | VF |
| C7M85_RS19580 () | 3584996..3585373 | + | 378 | WP_001059796.1 | hypothetical protein | VF |
| C7M85_RS19585 () | 3585376..3585948 | + | 573 | WP_000716189.1 | hypothetical protein | VF |
| C7M85_RS19590 () | 3585954..3586409 | + | 456 | WP_001063680.1 | hypothetical protein | VF |
| C7M85_RS19595 () | 3586409..3587947 | + | 1539 | WP_000723931.1 | hypothetical protein | VF |
| C7M85_RS19600 () | 3587961..3588416 | + | 456 | WP_000087467.1 | hypothetical protein | VF |
| C7M85_RS19605 () | 3588800..3589213 | - | 414 | WP_000444178.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| C7M85_RS19610 () | 3589269..3589640 | - | 372 | WP_000605365.1 | type III secretion system LEE GrlA-binding negative regulator GrlR | - |
| C7M85_RS19615 () | 3589836..3590294 | + | 459 | WP_000720636.1 | hypothetical protein | VF |
| C7M85_RS19620 () | 3590291..3591328 | - | 1038 | WP_001291693.1 | hypothetical protein | VF |
| C7M85_RS19625 () | 3591321..3592097 | - | 777 | WP_001002833.1 | hypothetical protein | VF |
| C7M85_RS19630 () | 3592097..3592366 | - | 270 | WP_000379425.1 | hypothetical protein | VF |
| C7M85_RS19635 () | 3592366..3593019 | - | 654 | WP_001299599.1 | hypothetical protein | VF |
| C7M85_RS19640 () | 3593024..3593677 | - | 654 | WP_140430965.1 | hypothetical protein | VF |
| C7M85_RS19645 () | 3593664..3594263 | - | 600 | WP_044805853.1 | hypothetical protein | VF |
| C7M85_RS19650 () | 3594260..3594574 | - | 315 | WP_001301632.1 | hypothetical protein | VF |
| C7M85_RS19655 () | 3594587..3594805 | - | 219 | WP_000628731.1 | hypothetical protein | VF |
| C7M85_RS19660 () | 3594820..3595191 | - | 372 | WP_001339878.1 | type III secretion system LEE master regulator Ler | - |
| C7M85_RS19665 () | 3596047..3597274 | - | 1228 | Protein_3601 | IS3 family transposase IS2 | Transposase |
| C7M85_RS19675 () | 3598217..3598384 | - | 168 | Protein_3602 | AlpA family transcriptional regulator | - |
| C7M85_RS19685 () | 3598575..3598778 | - | 204 | WP_001344959.1 | hypothetical protein | - |
| C7M85_RS30785 () | 3599087..3599227 | - | 141 | Protein_3604 | zinc-ribbon domain-containing protein | - |
| C7M85_RS19700 () | 3599381..3599578 | + | 198 | WP_000839256.1 | DUF957 domain-containing protein | - |
| C7M85_RS19705 () | 3599663..3600505 | + | 843 | WP_001280497.1 | DUF4942 domain-containing protein | - |
| C7M85_RS19715 () | 3601254..3602792 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| C7M85_RS19725 () | 3603158..3604492 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| C7M85_RS19730 () | 3604572..3606719 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| C7M85_RS19735 () | 3606778..3608235 | + | 1458 | WP_106883945.1 | dipeptide/tripeptide permease DtpC | - |
| C7M85_RS19740 () | 3608472..3609989 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| C7M85_RS19745 () | 3610108..3610281 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| C7M85_RS19750 () | 3610309..3610605 | - | 297 | WP_071829713.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| C7M85_RS19760 () | 3610832..3611104 | - | 273 | WP_106883944.1 | N-acetyltransferase | - |
| C7M85_RS19765 () | 3611116..3611346 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| C7M85_RS19770 () | 3611527..3613158 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| C7M85_RS19775 () | 3613155..3613874 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|