MGE detailed information
MGE type: Prophage MGE length: 84777 bp
Accession: NZ_CP027766 Location: 1737215..1821991 Organism: Escherichia coli strain 2013C-3342 Replicon: chromosome
Accession: NZ_CP027766 Location: 1737215..1821991 Organism: Escherichia coli strain 2013C-3342 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M85_RS09640 () | 1732689..1734059 | + | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| C7M85_RS09645 () | 1734227..1734898 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| C7M85_RS09650 () | 1734898..1736358 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| C7M85_RS09660 () | 1737215..1737496 | - | 282 | WP_000133425.1 | hypothetical protein | - |
| C7M85_RS09665 () | 1737510..1739171 | - | 1662 | WP_000127893.1 | terminase large subunit | - |
| C7M85_RS09670 () | 1739155..1739511 | - | 357 | WP_000113645.1 | phage terminase small subunit P27 family | - |
| C7M85_RS30515 () | 1739635..1739817 | - | 183 | WP_000174068.1 | hypothetical protein | - |
| C7M85_RS09680 () | 1739801..1740241 | - | 441 | WP_001145903.1 | HNH endonuclease | - |
| C7M85_RS09685 () | 1740241..1740537 | - | 297 | WP_000134113.1 | head-tail connector protein | - |
| C7M85_RS09690 () | 1740534..1740872 | - | 339 | WP_001020660.1 | phage head closure protein | - |
| C7M85_RS09695 () | 1740869..1742080 | - | 1212 | WP_000267612.1 | phage portal protein | - |
| C7M85_RS09700 () | 1742082..1742654 | - | 573 | WP_000504050.1 | HK97 family phage prohead protease | - |
| C7M85_RS09705 () | 1742694..1743851 | - | 1158 | WP_001137345.1 | phage major capsid protein | - |
| C7M85_RS09710 () | 1744144..1744368 | - | 225 | WP_001132080.1 | hypothetical protein | - |
| C7M85_RS09720 () | 1744493..1744765 | - | 273 | Protein_1785 | PerC family transcriptional regulator | - |
| C7M85_RS09725 () | 1744776..1745186 | - | 411 | WP_000126692.1 | single-stranded DNA-binding protein | - |
| C7M85_RS09730 () | 1745183..1745434 | - | 252 | WP_000198852.1 | hypothetical protein | - |
| C7M85_RS09740 () | 1745805..1747937 | - | 2133 | Protein_1788 | DUF927 domain-containing protein | - |
| C7M85_RS09745 () | 1747934..1748233 | - | 300 | WP_000770148.1 | DUF4222 domain-containing protein | - |
| C7M85_RS09750 () | 1748239..1748481 | - | 243 | WP_000794515.1 | hypothetical protein | - |
| C7M85_RS09755 () | 1748471..1748662 | - | 192 | WP_000659212.1 | hypothetical protein | - |
| C7M85_RS09760 () | 1748662..1748847 | - | 186 | WP_000920682.1 | hypothetical protein | - |
| C7M85_RS09765 () | 1748840..1749037 | - | 198 | WP_001453500.1 | host cell division inhibitor Icd-like protein | - |
| C7M85_RS09770 () | 1749063..1749806 | - | 744 | WP_001304194.1 | hypothetical protein | - |
| C7M85_RS09775 () | 1749864..1750052 | - | 189 | WP_000953272.1 | AlpA family transcriptional regulator | - |
| C7M85_RS09780 () | 1750417..1751645 | - | 1229 | Protein_1796 | tyrosine-type recombinase/integrase | - |
| C7M85_RS09785 () | 1751894..1753015 | + | 1122 | WP_044806027.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| C7M85_RS09790 () | 1753161..1754390 | - | 1230 | WP_000359438.1 | peptidase T | - |
| C7M85_RS09800 () | 1754640..1755776 | + | 1137 | WP_000531601.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| C7M85_RS09805 () | 1755760..1756623 | + | 864 | WP_000799400.1 | spermidine/putrescine ABC transporter permease PotB | - |
| C7M85_RS09815 () | 1756987..1758348 | + | 1362 | WP_024228725.1 | hypothetical protein | VF |
| C7M85_RS09820 () | 1758409..1758684 | + | 276 | WP_044806029.1 | hypothetical protein | - |
| C7M85_RS09825 () | 1758764..1758877 | - | 114 | Protein_1803 | non-LEE encoded effector protein NleB | - |
| C7M85_RS30520 () | 1758912..1759127 | - | 216 | Protein_1804 | IS256 family transposase ISSoEn2 | Transposase |
| C7M85_RS30525 () | 1759124..1759279 | + | 156 | Protein_1805 | IS256 family transposase ISSoEn2 | Transposase |
| C7M85_RS09835 () | 1759656..1763057 | - | 3402 | WP_001301984.1 | hypothetical protein | VF |
| C7M85_RS09840 () | 1763648..1765996 | - | 2349 | WP_001301673.1 | E3 ubiquitin-protein ligase SopA | VF |
| C7M85_RS30170 () | 1766016..1766105 | - | 90 | WP_115801847.1 | hypothetical protein | - |
| C7M85_RS30175 () | 1766118..1766210 | - | 93 | Protein_1809 | tail assembly protein | - |
| C7M85_RS09845 () | 1766212..1766481 | - | 270 | WP_106878697.1 | phage tail fiber C-terminal domain-containing protein | - |
| C7M85_RS09850 () | 1766483..1767795 | - | 1313 | Protein_1811 | prophage tail fiber N-terminal domain-containing protein | - |
| C7M85_RS09855 () | 1767860..1768459 | - | 600 | WP_106910351.1 | Outer membrane protein X | VF |
| C7M85_RS09860 () | 1768527..1772006 | - | 3480 | WP_106884201.1 | host specificity protein J | - |
| C7M85_RS09865 () | 1772255..1772887 | - | 633 | WP_072148837.1 | tail assembly protein | - |
| C7M85_RS09870 () | 1772833..1773570 | - | 738 | WP_106878694.1 | C40 family peptidase | - |
| C7M85_RS09875 () | 1773625..1774548 | - | 924 | WP_106884279.1 | phage antirepressor Ant | - |
| C7M85_RS09880 () | 1774619..1774792 | - | 174 | WP_001154345.1 | Arc family DNA-binding protein | - |
| C7M85_RS09885 () | 1774900..1775220 | + | 321 | WP_001302649.1 | Arc family DNA-binding protein | - |
| C7M85_RS09890 () | 1775237..1775935 | - | 699 | WP_106878693.1 | phage minor tail protein L | - |
| C7M85_RS09895 () | 1775935..1776276 | - | 342 | WP_000807940.1 | phage tail protein | - |
| C7M85_RS09900 () | 1776269..1779512 | - | 3244 | Protein_1821 | phage tail tape measure protein | - |
| C7M85_RS09905 () | 1779564..1779773 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C7M85_RS09910 () | 1779869..1780243 | - | 375 | WP_001030047.1 | phage tail assembly chaperone | - |
| C7M85_RS09915 () | 1780249..1780965 | - | 717 | WP_106883934.1 | immunoglobulin domain-containing protein | - |
| C7M85_RS09920 () | 1781032..1781376 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C7M85_RS09925 () | 1781373..1781819 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C7M85_RS09930 () | 1781816..1782166 | - | 351 | WP_001007911.1 | phage head closure protein | - |
| C7M85_RS09935 () | 1782176..1782502 | - | 327 | WP_000126019.1 | head-tail connector protein | - |
| C7M85_RS09940 () | 1782499..1784757 | - | 2259 | Protein_1829 | phage portal protein | - |
| C7M85_RS09945 () | 1784703..1784924 | - | 222 | WP_001063023.1 | hypothetical protein | - |
| C7M85_RS09950 () | 1784969..1786906 | - | 1938 | WP_001502569.1 | phage major capsid protein | - |
| C7M85_RS09955 () | 1786970..1788631 | - | 1662 | WP_106884202.1 | terminase large subunit | - |
| C7M85_RS09960 () | 1788628..1789191 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| C7M85_RS09970 () | 1789479..1789844 | - | 366 | WP_000279786.1 | HNH endonuclease | - |
| C7M85_RS09975 () | 1789886..1790071 | + | 186 | WP_001302977.1 | DUF3950 domain-containing protein | - |
| C7M85_RS09980 () | 1790201..1790341 | - | 141 | WP_000347013.1 | hypothetical protein | - |
| C7M85_RS09990 () | 1790698..1790922 | - | 225 | WP_000735655.1 | hypothetical protein | - |
| C7M85_RS30180 () | 1790987..1791193 | - | 207 | WP_001208682.1 | Rz1 family lipoprotein | - |
| C7M85_RS30190 () | 1791421..1791567 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| C7M85_RS10000 () | 1791567..1792136 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| C7M85_RS10005 () | 1792407..1792940 | - | 534 | WP_106910277.1 | lysozyme | - |
| C7M85_RS10010 () | 1792991..1793335 | - | 345 | WP_000731241.1 | YdfR family protein | - |
| C7M85_RS10015 () | 1793340..1793555 | - | 216 | WP_000284517.1 | class II holin family protein | - |
| C7M85_RS10020 () | 1793705..1795558 | - | 1854 | WP_106884145.1 | SASA family carbohydrate esterase | - |
| C7M85_RS10030 () | 1795785..1796040 | - | 256 | Protein_1845 | DUF3927 family protein | - |
| C7M85_RS10035 () | 1796037..1796465 | - | 429 | Protein_1846 | tellurite resistance TerB family protein | - |
| C7M85_RS10055 () | 1796917..1797630 | - | 714 | WP_000301785.1 | helix-turn-helix domain-containing protein | - |
| C7M85_RS10060 () | 1797765..1797962 | - | 198 | WP_001369585.1 | hypothetical protein | - |
| C7M85_RS10065 () | 1798205..1798786 | - | 582 | WP_000211416.1 | ORF6N domain-containing protein | - |
| C7M85_RS10070 () | 1799060..1799614 | - | 555 | WP_000640148.1 | DUF1133 family protein | - |
| C7M85_RS10075 () | 1799611..1799901 | - | 291 | WP_000228019.1 | DUF1364 domain-containing protein | - |
| C7M85_RS10080 () | 1799901..1800500 | - | 600 | WP_000940348.1 | DUF1367 family protein | - |
| C7M85_RS30530 () | 1800560..1800733 | - | 174 | WP_000687443.1 | hypothetical protein | - |
| C7M85_RS10085 () | 1800986..1801141 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C7M85_RS10095 () | 1801387..1801491 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| C7M85_RS10100 () | 1801607..1802146 | - | 540 | Protein_1856 | DUF551 domain-containing protein | - |
| C7M85_RS10105 () | 1802393..1802863 | - | 471 | Protein_1857 | DUF551 domain-containing protein | - |
| C7M85_RS10110 () | 1803031..1803222 | - | 192 | WP_001014289.1 | hypothetical protein | - |
| C7M85_RS10115 () | 1803224..1803691 | - | 468 | WP_044805253.1 | hypothetical protein | - |
| C7M85_RS10120 () | 1803838..1804311 | - | 474 | WP_044805254.1 | class I SAM-dependent methyltransferase | - |
| C7M85_RS10125 () | 1804308..1804730 | - | 423 | WP_044805255.1 | DUF977 family protein | - |
| C7M85_RS10130 () | 1804746..1805507 | - | 762 | WP_044805256.1 | DUF1627 domain-containing protein | - |
| C7M85_RS10135 () | 1805530..1806276 | - | 747 | WP_044805258.1 | ATP-binding protein | - |
| C7M85_RS10140 () | 1806283..1807065 | - | 783 | WP_044805259.1 | hypothetical protein | - |
| C7M85_RS10145 () | 1807143..1807565 | - | 423 | WP_044805260.1 | hypothetical protein | - |
| C7M85_RS10150 () | 1807562..1807804 | - | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| C7M85_RS10155 () | 1807901..1808320 | + | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| C7M85_RS10160 () | 1808627..1808779 | + | 153 | WP_000379547.1 | DUF1391 family protein | - |
| C7M85_RS10165 () | 1809200..1809421 | + | 222 | WP_000560219.1 | cell division protein FtsZ | - |
| C7M85_RS10170 () | 1809421..1809591 | + | 171 | WP_000358365.1 | hypothetical protein | - |
| C7M85_RS10175 () | 1809666..1809941 | + | 276 | WP_044805262.1 | hypothetical protein | - |
| C7M85_RS10180 () | 1810042..1813191 | + | 3150 | WP_096317506.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| C7M85_RS10185 () | 1813203..1814255 | + | 1053 | Protein_1873 | recombinase RecT | - |
| C7M85_RS10190 () | 1814319..1814513 | + | 195 | WP_010989194.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| C7M85_RS10195 () | 1814506..1814694 | + | 189 | WP_024177035.1 | DUF1187 family protein | - |
| - () | 1814512..1814690 | - | 179 | NuclAT_0 | - | - |
| - () | 1814512..1814690 | - | 179 | NuclAT_0 | - | - |
| - () | 1814512..1814690 | - | 179 | NuclAT_0 | - | - |
| - () | 1814512..1814690 | - | 179 | NuclAT_0 | - | - |
| C7M85_RS10200 () | 1814801..1815082 | + | 282 | WP_005127484.1 | excisionase | - |
| C7M85_RS10205 () | 1815048..1816124 | + | 1077 | WP_001189085.1 | hypothetical protein ; Integrase | Integrase |
| - () | 1816255..1816489 | + | 235 | - | - | Antitoxin Detail |
| - () | 1816256..1816359 | - | 104 | - | - | Toxin Detail |
| C7M85_RS10210 () | 1816517..1816858 | - | 342 | WP_000976492.1 | YebY family protein | - |
| C7M85_RS10215 () | 1816871..1817743 | - | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| C7M85_RS10220 () | 1817747..1818121 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| C7M85_RS10225 () | 1818260..1818490 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| C7M85_RS10230 () | 1818592..1819248 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| C7M85_RS10235 () | 1819272..1819934 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| C7M85_RS10240 () | 1819931..1821991 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| C7M85_RS10245 () | 1822200..1822859 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| C7M85_RS10250 () | 1823186..1823542 | - | 357 | WP_001295500.1 | protein YebF | - |
| C7M85_RS10255 () | 1823609..1823899 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| C7M85_RS10260 () | 1824033..1825211 | + | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| C7M85_RS10265 () | 1825267..1825908 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|