MGE detailed information
MGE type: Genomic_island MGE length: 17474 bp
Accession: NZ_CP027756 Location: 1744169..1761642 Organism: Pseudomonas synxantha strain R6-28-08 Replicon: chromosome
Accession: NZ_CP027756 Location: 1744169..1761642 Organism: Pseudomonas synxantha strain R6-28-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4K01_RS08010 () | 1739336..1740352 | - | 1017 | WP_057021998.1 | DUF4917 family protein | - |
| C4K01_RS08015 () | 1740476..1741624 | + | 1149 | WP_057021999.1 | L-threonine dehydrogenase | - |
| C4K01_RS08020 () | 1741715..1742389 | + | 675 | WP_057022000.1 | NAD(P)H-binding protein | - |
| C4K01_RS08025 () | 1742413..1742901 | - | 489 | WP_057022001.1 | DMT family transporter | - |
| C4K01_RS08030 () | 1742970..1743887 | + | 918 | WP_057022002.1 | LysR family transcriptional regulator | - |
| C4K01_RS08035 () | 1743895..1744179 | - | 285 | WP_082636613.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| C4K01_RS08040 () | 1744169..1744408 | - | 240 | WP_057022003.1 | ribbon-helix-helix protein, CopG family | - |
| C4K01_RS08045 () | 1744508..1744924 | + | 417 | WP_057022004.1 | fosfomycin resistance glutathione transferase | - |
| C4K01_RS08050 () | 1744972..1745613 | + | 642 | WP_057022005.1 | LysE family translocator | - |
| C4K01_RS08055 () | 1745734..1746261 | + | 528 | WP_005785958.1 | DUF4142 domain-containing protein | - |
| C4K01_RS08060 () | 1746317..1746742 | - | 426 | WP_057022006.1 | low affinity iron permease family protein | - |
| C4K01_RS08065 () | 1746921..1747703 | + | 783 | WP_057022007.1 | GNAT family N-acetyltransferase | - |
| C4K01_RS08070 () | 1747704..1748204 | - | 501 | WP_057022008.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| C4K01_RS08075 () | 1748304..1748615 | - | 312 | WP_057022009.1 | hypothetical protein | - |
| C4K01_RS08080 () | 1748698..1749108 | - | 411 | WP_057022010.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C4K01_RS08085 () | 1749131..1749313 | - | 183 | WP_082636614.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C4K01_RS08090 () | 1749480..1750373 | - | 894 | WP_057022012.1 | LysR family transcriptional regulator | - |
| C4K01_RS08095 () | 1750469..1751644 | + | 1176 | WP_057022013.1 | MFS transporter | - |
| C4K01_RS08105 () | 1751965..1752849 | - | 885 | WP_057022014.1 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | VF |
| C4K01_RS08110 () | 1753151..1753843 | - | 693 | WP_057022015.1 | pseudouridine synthase | - |
| C4K01_RS08115 () | 1753833..1754045 | - | 213 | WP_057022016.1 | cysteine-rich CWC family protein | - |
| C4K01_RS08120 () | 1754290..1754649 | + | 360 | WP_082636615.1 | hypothetical protein | - |
| C4K01_RS08125 () | 1754803..1755237 | + | 435 | WP_057022017.1 | DUF3757 domain-containing protein | - |
| C4K01_RS08130 () | 1755242..1756354 | - | 1113 | WP_057022018.1 | enoyl-CoA hydratase/isomerase family protein | - |
| C4K01_RS08135 () | 1756491..1757183 | + | 693 | WP_005785971.1 | uracil-DNA glycosylase | - |
| C4K01_RS08140 () | 1757412..1759442 | + | 2031 | WP_057022019.1 | hypothetical protein | - |
| C4K01_RS08145 () | 1759705..1761642 | + | 1938 | WP_057022020.1 | hypothetical protein | - |
| C4K01_RS08150 () | 1761825..1764113 | + | 2289 | WP_124356079.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| C4K01_RS08155 () | 1764136..1764387 | - | 252 | WP_124356080.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|