MGE detailed information
MGE type: Genomic_island MGE length: 20808 bp
Accession: NZ_CP027755 Location: 4139469..4160276 Organism: Pseudomonas synxantha strain 2-79 Replicon: chromosome
Accession: NZ_CP027755 Location: 4139469..4160276 Organism: Pseudomonas synxantha strain 2-79 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4K02_RS18635 () | 4135198..4135698 | - | 501 | WP_043049597.1 | Lrp/AsnC family transcriptional regulator | - |
| C4K02_RS18640 () | 4135818..4136852 | + | 1035 | WP_043049596.1 | histone deacetylase family protein | - |
| C4K02_RS18645 () | 4137147..4138577 | + | 1431 | WP_043049595.1 | amino acid permease | - |
| C4K02_RS18650 () | 4138645..4138971 | - | 327 | WP_043049594.1 | DUF2388 domain-containing protein | - |
| C4K02_RS18660 () | 4139469..4139732 | - | 264 | WP_043049593.1 | hypothetical protein | - |
| C4K02_RS18665 () | 4139942..4140139 | - | 198 | WP_043049592.1 | hypothetical protein | - |
| C4K02_RS18670 () | 4140826..4141305 | - | 480 | WP_043049591.1 | hypothetical protein | - |
| C4K02_RS18675 () | 4142137..4142445 | + | 309 | WP_043049590.1 | lipoprotein | - |
| C4K02_RS18680 () | 4143317..4143553 | - | 237 | WP_043049589.1 | helix-turn-helix domain-containing protein | - |
| C4K02_RS18685 () | 4143652..4144077 | + | 426 | WP_043049588.1 | hypothetical protein | - |
| C4K02_RS18690 () | 4144129..4144387 | - | 259 | Protein_3599 | transcriptional regulator | - |
| C4K02_RS18695 () | 4144465..4144665 | - | 201 | WP_124421747.1 | hypothetical protein | - |
| C4K02_RS18705 () | 4145072..4145359 | + | 288 | WP_043049587.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C4K02_RS18710 () | 4145349..4145636 | + | 288 | WP_043049586.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4K02_RS18715 () | 4145947..4146516 | - | 570 | WP_052501146.1 | hypothetical protein | - |
| C4K02_RS18720 () | 4146771..4147289 | - | 519 | WP_052501145.1 | hypothetical protein | - |
| C4K02_RS18725 () | 4147340..4147576 | - | 237 | WP_043049585.1 | hypothetical protein | - |
| C4K02_RS18730 () | 4147615..4147746 | - | 132 | WP_094030725.1 | YHYH domain-containing protein | - |
| C4K02_RS18735 () | 4148073..4148294 | + | 222 | WP_043049584.1 | hypothetical protein | - |
| C4K02_RS18740 () | 4148293..4148715 | + | 423 | Protein_3608 | hypothetical protein ; Integrase | Integrase |
| C4K02_RS18745 () | 4149336..4151759 | + | 2424 | WP_043049583.1 | TerB N-terminal domain-containing protein | - |
| C4K02_RS18750 () | 4151756..4153051 | + | 1296 | WP_043049582.1 | ATP-binding protein | - |
| C4K02_RS18755 () | 4153026..4155269 | + | 2244 | WP_080889087.1 | DEAD/DEAH box helicase | - |
| C4K02_RS18760 () | 4155425..4156474 | - | 1050 | WP_043049581.1 | hypothetical protein | - |
| C4K02_RS18765 () | 4156474..4158018 | - | 1545 | WP_043049580.1 | hypothetical protein | - |
| C4K02_RS18770 () | 4158019..4158828 | - | 810 | WP_043049579.1 | hypothetical protein | - |
| C4K02_RS18775 () | 4158840..4160276 | - | 1437 | WP_043049578.1 | hypothetical protein | - |
| C4K02_RS18785 () | 4161181..4161537 | - | 357 | WP_003174972.1 | MerR family transcriptional regulator | - |
| C4K02_RS18790 () | 4161518..4161820 | - | 303 | WP_002553164.1 | integration host factor subunit alpha | - |
| C4K02_RS18795 () | 4161824..4164202 | - | 2379 | WP_043049577.1 | phenylalanine--tRNA ligase subunit beta | - |
| C4K02_RS18800 () | 4164229..4165245 | - | 1017 | WP_003192486.1 | phenylalanine--tRNA ligase subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|