MGE detailed information
MGE type: Prophage MGE length: 38992 bp
Accession: NZ_CP027751 Location: 2352158..2391149 Organism: Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR18 Replicon: chromosome
Accession: NZ_CP027751 Location: 2352158..2391149 Organism: Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4K06_RS10760 () | 2349670..2351052 | + | 1383 | WP_009048175.1 | efflux transporter outer membrane subunit | - |
| C4K06_RS10765 () | 2351171..2351758 | + | 588 | WP_028682910.1 | hypothetical protein | - |
| C4K06_RS10770 () | 2352158..2352448 | - | 291 | WP_009048177.1 | putative addiction module antidote protein | Antitoxin Detail |
| C4K06_RS10775 () | 2352450..2352743 | - | 294 | WP_016705075.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4K06_RS10780 () | 2352978..2354372 | - | 1395 | WP_053268635.1 | VOC family protein | - |
| C4K06_RS10785 () | 2354637..2355761 | + | 1125 | WP_041988396.1 | diguanylate cyclase | - |
| C4K06_RS10790 () | 2356034..2356459 | - | 426 | WP_124303536.1 | tail fiber assembly protein | - |
| C4K06_RS10795 () | 2356473..2357540 | - | 1068 | WP_124303538.1 | hypothetical protein | - |
| C4K06_RS10800 () | 2357540..2358121 | - | 582 | WP_124303540.1 | phage tail protein | - |
| C4K06_RS10805 () | 2358114..2359235 | - | 1122 | WP_124303542.1 | baseplate J/gp47 family protein | - |
| C4K06_RS10810 () | 2359219..2359596 | - | 378 | WP_124303544.1 | GPW/gp25 family protein | - |
| C4K06_RS10815 () | 2359703..2360446 | + | 744 | WP_124303546.1 | hypothetical protein | - |
| C4K06_RS10820 () | 2360434..2360985 | - | 552 | WP_124303548.1 | phage baseplate assembly protein V | - |
| C4K06_RS10825 () | 2360985..2362100 | - | 1116 | WP_124303550.1 | late control protein D | - |
| C4K06_RS10830 () | 2362088..2362294 | - | 207 | WP_028684150.1 | tail protein X | - |
| C4K06_RS10835 () | 2362294..2363175 | - | 882 | WP_124303552.1 | phage tail protein | - |
| C4K06_RS10840 () | 2363175..2365763 | - | 2589 | WP_124303554.1 | phage tail tape measure protein | - |
| C4K06_RS10845 () | 2365948..2366262 | - | 315 | WP_124303555.1 | phage tail assembly protein | - |
| C4K06_RS10850 () | 2366368..2367108 | + | 741 | WP_124303557.1 | hypothetical protein | - |
| C4K06_RS10855 () | 2367150..2367674 | - | 525 | WP_124303559.1 | phage major tail tube protein | - |
| C4K06_RS10860 () | 2367675..2369099 | - | 1425 | WP_124303561.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| C4K06_RS10865 () | 2369106..2369339 | - | 234 | WP_124303563.1 | hypothetical protein | - |
| C4K06_RS10870 () | 2369336..2369818 | - | 483 | WP_124303565.1 | hypothetical protein | - |
| C4K06_RS10875 () | 2369818..2370249 | - | 432 | WP_124304180.1 | DUF1320 domain-containing protein | - |
| C4K06_RS10880 () | 2370255..2371235 | - | 981 | WP_124303567.1 | major capsid protein | - |
| C4K06_RS10885 () | 2371249..2371617 | - | 369 | WP_124303569.1 | head decoration protein | - |
| C4K06_RS10890 () | 2371626..2372648 | - | 1023 | WP_124303571.1 | peptidase | - |
| C4K06_RS10895 () | 2372774..2373166 | - | 393 | WP_124303573.1 | hypothetical protein | - |
| C4K06_RS10900 () | 2373281..2373757 | - | 477 | WP_124303575.1 | phage virion morphogenesis protein | - |
| C4K06_RS10905 () | 2373759..2374598 | - | 840 | WP_124303577.1 | minor capsid protein | - |
| C4K06_RS10910 () | 2374598..2376094 | - | 1497 | WP_124303579.1 | DUF935 family protein | - |
| C4K06_RS10915 () | 2376091..2377419 | - | 1329 | WP_124303581.1 | terminase family protein | - |
| C4K06_RS10920 () | 2377416..2377961 | - | 546 | WP_124303583.1 | DUF3486 family protein | - |
| C4K06_RS10925 () | 2377963..2378256 | - | 294 | WP_124303585.1 | ArsR family transcriptional regulator | - |
| C4K06_RS10930 () | 2378253..2378558 | - | 306 | WP_044463688.1 | hypothetical protein | - |
| C4K06_RS10935 () | 2378555..2378773 | - | 219 | WP_124303587.1 | TraR/DksA C4-type zinc finger protein | - |
| C4K06_RS10940 () | 2378780..2379379 | - | 600 | WP_124303589.1 | lysis protein | - |
| C4K06_RS10945 () | 2379566..2379805 | - | 240 | WP_124303591.1 | hypothetical protein | - |
| C4K06_RS10950 () | 2379802..2380269 | - | 468 | WP_124303593.1 | structural protein | - |
| C4K06_RS10955 () | 2380408..2380791 | - | 384 | WP_028684126.1 | hypothetical protein | - |
| C4K06_RS10960 () | 2380797..2381201 | - | 405 | WP_124303595.1 | hypothetical protein | - |
| C4K06_RS10965 () | 2381216..2381806 | - | 591 | WP_124303597.1 | hypothetical protein | - |
| C4K06_RS10970 () | 2381810..2382226 | - | 417 | WP_038632459.1 | transcriptional regulator | - |
| C4K06_RS10975 () | 2382312..2382524 | + | 213 | WP_038632458.1 | DNA-binding protein | - |
| C4K06_RS10985 () | 2382916..2383395 | + | 480 | WP_038632456.1 | hypothetical protein | - |
| C4K06_RS10990 () | 2383392..2383694 | + | 303 | WP_028684121.1 | helix-turn-helix domain-containing protein | - |
| C4K06_RS10995 () | 2383705..2384640 | + | 936 | WP_124303602.1 | hypothetical protein | - |
| C4K06_RS11000 () | 2384644..2386419 | + | 1776 | WP_124303604.1 | hypothetical protein ; Integrase | Integrase |
| C4K06_RS11005 () | 2386419..2387600 | + | 1182 | WP_124303606.1 | AAA family ATPase | - |
| C4K06_RS11010 () | 2387602..2387922 | + | 321 | WP_124303608.1 | hypothetical protein | - |
| C4K06_RS11015 () | 2387915..2388199 | + | 285 | WP_124303610.1 | hypothetical protein | - |
| C4K06_RS11020 () | 2388199..2388678 | + | 480 | WP_124303612.1 | hypothetical protein | - |
| C4K06_RS11025 () | 2388671..2389288 | + | 618 | WP_124303614.1 | DUF3164 family protein | - |
| C4K06_RS11030 () | 2389314..2389679 | + | 366 | WP_124304181.1 | DUF2528 family protein | - |
| C4K06_RS11035 () | 2389681..2390121 | + | 441 | WP_124303616.1 | hypothetical protein | - |
| C4K06_RS11040 () | 2390123..2390341 | + | 219 | WP_124303618.1 | hypothetical protein | - |
| C4K06_RS11045 () | 2390338..2390790 | + | 453 | WP_124303620.1 | regulatory protein GemA | - |
| C4K06_RS11050 () | 2390787..2391149 | + | 363 | WP_124303622.1 | DNA-binding protein | - |
| C4K06_RS11055 () | 2391314..2392516 | + | 1203 | WP_124303624.1 | M20/M25/M40 family metallo-hydrolase | - |
| C4K06_RS11060 () | 2392755..2393153 | + | 399 | WP_110175421.1 | carboxymuconolactone decarboxylase family protein | - |
| C4K06_RS11065 () | 2393219..2394253 | - | 1035 | WP_009048183.1 | arginine N-succinyltransferase | - |
| C4K06_RS11070 () | 2394312..2395328 | - | 1017 | WP_009048184.1 | arginine N-succinyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|