MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 30811 bp
Accession: NZ_CP027744 Location: 422169..452979 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain M71 Replicon: chromosome
Accession: NZ_CP027744 Location: 422169..452979 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain M71 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4K19_RS01890 () | 417845..418687 | + | 843 | WP_124310141.1 | TIGR04255 family protein | - |
| C4K19_RS01895 () | 418865..419206 | + | 342 | WP_124310142.1 | hypothetical protein | - |
| C4K19_RS01900 () | 419214..419771 | + | 558 | WP_124310143.1 | hypothetical protein | - |
| C4K19_RS01905 () | 420972..421175 | + | 204 | WP_124310144.1 | hypothetical protein | - |
| C4K19_RS01910 () | 421250..421879 | - | 630 | WP_124310145.1 | hypothetical protein | - |
| C4K19_RS01915 () | 422345..422593 | - | 249 | WP_124310146.1 | hypothetical protein | - |
| C4K19_RS01920 () | 423143..423568 | - | 426 | WP_038582934.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C4K19_RS01925 () | 423641..423823 | - | 183 | WP_028681531.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C4K19_RS01930 () | 424049..424690 | + | 642 | WP_124310147.1 | hypothetical protein | - |
| C4K19_RS01935 () | 424687..425658 | - | 972 | WP_028681533.1 | hypothetical protein | - |
| C4K19_RS01940 () | 425631..426335 | - | 705 | WP_124310148.1 | hypothetical protein | - |
| C4K19_RS01945 () | 426332..426880 | - | 549 | WP_124310149.1 | DNA-binding protein | - |
| C4K19_RS01950 () | 426877..427800 | - | 924 | WP_124310150.1 | hypothetical protein | - |
| C4K19_RS01955 () | 427797..428504 | - | 708 | WP_028681537.1 | hypothetical protein | - |
| C4K19_RS01960 () | 428513..430198 | - | 1686 | WP_124310151.1 | phage tail protein | - |
| C4K19_RS01965 () | 430208..430732 | - | 525 | WP_028681539.1 | phage tail protein | - |
| C4K19_RS01970 () | 430729..431904 | - | 1176 | WP_124310152.1 | baseplate J/gp47 family protein | - |
| C4K19_RS01975 () | 431901..432218 | - | 318 | WP_028681541.1 | DUF2590 family protein | - |
| C4K19_RS01980 () | 432215..434200 | - | 1986 | WP_124310153.1 | phage tail tape measure protein | - |
| C4K19_RS01985 () | 434369..434659 | - | 291 | WP_028681543.1 | hypothetical protein | - |
| C4K19_RS01990 () | 434656..435159 | - | 504 | WP_124310154.1 | lysis protein | - |
| C4K19_RS01995 () | 435156..435689 | - | 534 | WP_041984756.1 | lysozyme | - |
| C4K19_RS02000 () | 435686..435940 | - | 255 | WP_041984753.1 | hypothetical protein | - |
| C4K19_RS02005 () | 436036..436248 | - | 213 | WP_124310155.1 | TraR/DksA C4-type zinc finger protein | - |
| C4K19_RS02010 () | 436248..436697 | - | 450 | WP_124310156.1 | DUF2597 family protein | - |
| C4K19_RS02015 () | 436705..437820 | - | 1116 | WP_028681548.1 | DUF2586 family protein | - |
| C4K19_RS02020 () | 437832..438512 | - | 681 | WP_124310157.1 | virion morphogenesis protein | - |
| C4K19_RS02025 () | 438499..438951 | - | 453 | WP_124310158.1 | phage tail protein | - |
| C4K19_RS02030 () | 438948..439409 | - | 462 | WP_124312461.1 | head completion/stabilization protein | - |
| C4K19_RS02035 () | 439508..440227 | - | 720 | WP_124310159.1 | terminase | - |
| C4K19_RS02040 () | 440224..441246 | - | 1023 | WP_124310160.1 | phage major capsid protein, P2 family | - |
| C4K19_RS02045 () | 441248..442171 | - | 924 | WP_124310161.1 | GPO family capsid scaffolding protein | - |
| C4K19_RS02050 () | 442336..444387 | + | 2052 | WP_124310162.1 | terminase family protein | - |
| C4K19_RS02055 () | 444299..445165 | + | 867 | WP_164485717.1 | phage portal protein | - |
| C4K19_RS02060 () | 445246..445509 | + | 264 | WP_080748343.1 | ogr/Delta-like zinc finger family protein | - |
| C4K19_RS02065 () | 445482..445697 | - | 216 | WP_045881044.1 | hypothetical protein | - |
| C4K19_RS02070 () | 446222..446470 | - | 249 | WP_124310164.1 | hypothetical protein | - |
| C4K19_RS02075 () | 446464..446685 | - | 222 | WP_124310165.1 | Arc family DNA-binding protein | - |
| C4K19_RS02080 () | 446678..447112 | - | 435 | WP_124310166.1 | DUF2528 family protein | - |
| C4K19_RS02085 () | 447105..447389 | - | 285 | WP_124310167.1 | hypothetical protein | - |
| C4K19_RS02090 () | 447451..447702 | - | 252 | WP_124310168.1 | hypothetical protein | - |
| C4K19_RS02095 () | 447713..448006 | - | 294 | WP_124310169.1 | hypothetical protein | - |
| C4K19_RS02100 () | 448043..448402 | + | 360 | WP_124310170.1 | hypothetical protein | - |
| C4K19_RS02105 () | 448446..451166 | - | 2721 | WP_124310171.1 | toprim domain-containing protein | - |
| C4K19_RS02110 () | 451302..451502 | - | 201 | Protein_409 | hypothetical protein | - |
| C4K19_RS02115 () | 451594..451830 | + | 237 | WP_124310172.1 | helix-turn-helix domain-containing protein | - |
| C4K19_RS02120 () | 451833..452891 | + | 1059 | WP_052107433.1 | IS91 family transposase ISCARN110 | Transposase |
| C4K19_RS02130 () | 453232..454329 | - | 1098 | WP_124310173.1 | DUF3396 domain-containing protein | - |
| C4K19_RS02135 () | 454346..455026 | - | 681 | WP_096375947.1 | VRR-NUC domain-containing protein | - |
| C4K19_RS02140 () | 455056..455565 | - | 510 | WP_028683813.1 | PAAR domain-containing protein | - |
| C4K19_RS02145 () | 455916..456746 | - | 831 | WP_124310174.1 | FkbM family methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|