MGE detailed information
MGE type: Genomic_island MGE length: 16550 bp
Accession: NZ_CP027743 Location: 4179764..4196313 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain CW2 Replicon: chromosome
Accession: NZ_CP027743 Location: 4179764..4196313 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain CW2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4K20_RS18520 () | 4174780..4175688 | - | 909 | WP_124299842.1 | sugar kinase | - |
| C4K20_RS18525 () | 4175813..4177030 | - | 1218 | WP_081360546.1 | amino acid deaminase | - |
| C4K20_RS18530 () | 4177068..4177832 | - | 765 | WP_016703107.1 | IclR family transcriptional regulator | - |
| C4K20_RS18535 () | 4178030..4178419 | - | 390 | WP_124299843.1 | RidA family protein | - |
| C4K20_RS18540 () | 4178835..4179107 | + | 273 | WP_038578030.1 | hypothetical protein | - |
| C4K20_RS18550 () | 4179764..4180555 | + | 792 | WP_124299845.1 | methyltransferase domain-containing protein | - |
| C4K20_RS18555 () | 4180872..4181354 | + | 483 | WP_009049637.1 | acyl-CoA thioesterase | - |
| C4K20_RS18560 () | 4181411..4183060 | + | 1650 | WP_124299846.1 | FMN-binding glutamate synthase family protein | - |
| C4K20_RS18565 () | 4183265..4183546 | - | 282 | WP_124299847.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4K20_RS18570 () | 4183536..4183784 | - | 249 | WP_009044432.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C4K20_RS18575 () | 4183880..4184668 | - | 789 | WP_124299848.1 | helix-turn-helix transcriptional regulator | - |
| C4K20_RS18580 () | 4184753..4185751 | + | 999 | WP_124299849.1 | bile acid:sodium symporter | - |
| C4K20_RS18585 () | 4186041..4187812 | + | 1772 | Protein_3646 | hypothetical protein | - |
| C4K20_RS18590 () | 4187885..4188346 | + | 462 | WP_009049642.1 | YccF domain-containing protein | - |
| C4K20_RS18595 () | 4188633..4189709 | + | 1077 | WP_124299850.1 | GGDEF domain-containing protein | - |
| C4K20_RS18600 () | 4189738..4190655 | - | 918 | WP_124299851.1 | hypothetical protein | - |
| C4K20_RS18605 () | 4190762..4192321 | - | 1560 | WP_124299852.1 | TerC family protein | - |
| C4K20_RS18610 () | 4192724..4193446 | - | 723 | WP_124299853.1 | immunity 52 family protein | - |
| C4K20_RS18615 () | 4193464..4193913 | - | 450 | WP_036985607.1 | hypothetical protein | - |
| C4K20_RS18620 () | 4194300..4194683 | - | 384 | WP_081360533.1 | hypothetical protein | - |
| C4K20_RS18625 () | 4194676..4195143 | - | 468 | WP_081251667.1 | DUF4123 domain-containing protein | - |
| C4K20_RS18630 () | 4195248..4195640 | - | 393 | WP_081360532.1 | PAAR domain-containing protein | - |
| C4K20_RS18635 () | 4195660..4196313 | - | 654 | WP_124299854.1 | hypothetical protein | - |
| C4K20_RS18640 () | 4196454..4197326 | - | 873 | WP_124299855.1 | LysR family transcriptional regulator | - |
| C4K20_RS18645 () | 4197430..4197927 | + | 498 | WP_081360529.1 | heme-binding protein | - |
| C4K20_RS18650 () | 4197924..4199462 | + | 1539 | WP_124299856.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|