MGE detailed information
MGE type: Prophage MGE length: 50863 bp
Accession: NZ_CP027740 Location: 2241383..2292245 Organism: Pseudomonas chlororaphis subsp. piscium strain ChPhzS140 Replicon: chromosome
Accession: NZ_CP027740 Location: 2241383..2292245 Organism: Pseudomonas chlororaphis subsp. piscium strain ChPhzS140 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4K29_RS32255 () | 2236491..2237225 | + | 735 | WP_164485752.1 | hypothetical protein | - |
| C4K29_RS10240 () | 2237408..2237869 | - | 462 | WP_124304701.1 | hypothetical protein | - |
| C4K29_RS10245 () | 2238421..2239242 | + | 822 | WP_124304702.1 | hypothetical protein | - |
| C4K29_RS10250 () | 2239282..2240007 | + | 726 | WP_124304703.1 | hypothetical protein | - |
| C4K29_RS10255 () | 2240301..2240729 | - | 429 | WP_124303174.1 | Arc family DNA-binding protein | - |
| C4K29_RS10260 () | 2240847..2241002 | + | 156 | WP_124303173.1 | Arc family DNA-binding protein | - |
| C4K29_RS10265 () | 2241075..2241383 | + | 309 | WP_124304704.1 | DUF3077 domain-containing protein | - |
| C4K29_RS10270 () | 2241383..2242180 | + | 798 | WP_124304705.1 | phage antirepressor KilAC domain-containing protein | - |
| C4K29_RS10275 () | 2242314..2242658 | + | 345 | WP_062823026.1 | hypothetical protein | Toxin Detail |
| C4K29_RS10280 () | 2242655..2242969 | + | 315 | WP_124304706.1 | transcriptional regulator | Antitoxin Detail |
| C4K29_RS10285 () | 2243021..2243440 | - | 420 | WP_206430670.1 | hypothetical protein | - |
| C4K29_RS10290 () | 2243545..2243790 | + | 246 | WP_124304708.1 | helix-turn-helix domain-containing protein | - |
| C4K29_RS10295 () | 2243914..2244336 | + | 423 | WP_102680186.1 | Rha family transcriptional regulator | - |
| C4K29_RS10300 () | 2244436..2245098 | + | 663 | WP_124304709.1 | hypothetical protein | - |
| C4K29_RS10305 () | 2245095..2245358 | + | 264 | WP_124304710.1 | hypothetical protein | - |
| C4K29_RS10315 () | 2245573..2245998 | + | 426 | WP_124304712.1 | GIY-YIG nuclease family protein | - |
| C4K29_RS10320 () | 2245995..2246789 | + | 795 | WP_124304713.1 | helix-turn-helix domain-containing protein | - |
| C4K29_RS10325 () | 2246770..2247576 | + | 807 | WP_164485753.1 | IS21 family transposase ISKol1 | Transposase |
| C4K29_RS10330 () | 2247573..2248943 | + | 1371 | WP_124304714.1 | AAA family ATPase | - |
| C4K29_RS10335 () | 2248961..2249230 | + | 270 | WP_124305343.1 | hypothetical protein | - |
| C4K29_RS10340 () | 2249227..2249613 | + | 387 | WP_124304715.1 | antitermination protein Q | - |
| C4K29_RS10350 () | 2250591..2251448 | + | 858 | WP_124304717.1 | putidacin L1 family lectin-like bacteriocin | - |
| C4K29_RS10355 () | 2251718..2252044 | + | 327 | WP_124304718.1 | phage holin family protein | - |
| C4K29_RS10360 () | 2252044..2252340 | + | 297 | WP_124304719.1 | hypothetical protein | - |
| C4K29_RS10365 () | 2252479..2252688 | + | 210 | WP_164485754.1 | DUF2158 domain-containing protein | - |
| C4K29_RS32260 () | 2252770..2252910 | - | 141 | WP_164485755.1 | hypothetical protein | - |
| C4K29_RS10370 () | 2253031..2253654 | + | 624 | WP_124304721.1 | hypothetical protein | - |
| C4K29_RS10375 () | 2253686..2254147 | + | 462 | WP_124304722.1 | DUF2280 domain-containing protein | - |
| C4K29_RS10380 () | 2254134..2255435 | + | 1302 | WP_124303261.1 | terminase family protein | - |
| C4K29_RS10385 () | 2255432..2256850 | + | 1419 | WP_124303260.1 | DUF4055 domain-containing protein | - |
| C4K29_RS10390 () | 2256825..2257910 | + | 1086 | WP_124303903.1 | minor capsid protein | - |
| C4K29_RS10395 () | 2257944..2258408 | + | 465 | WP_124303259.1 | hypothetical protein | - |
| C4K29_RS10400 () | 2258486..2259214 | + | 729 | WP_124303146.1 | hypothetical protein | - |
| C4K29_RS10405 () | 2259226..2260179 | + | 954 | WP_124303258.1 | Ig domain-containing protein | - |
| C4K29_RS10410 () | 2260224..2260817 | + | 594 | WP_124303257.1 | hypothetical protein | - |
| C4K29_RS10415 () | 2260873..2261376 | + | 504 | WP_124303256.1 | hypothetical protein | - |
| C4K29_RS10420 () | 2261393..2261761 | + | 369 | WP_124303255.1 | hypothetical protein | - |
| C4K29_RS10425 () | 2261758..2262354 | + | 597 | WP_124303254.1 | hypothetical protein | - |
| C4K29_RS10430 () | 2262351..2262767 | + | 417 | WP_124303253.1 | DUF4128 domain-containing protein | - |
| C4K29_RS10435 () | 2262837..2263484 | + | 648 | WP_124303252.1 | phage tail protein | - |
| C4K29_RS10440 () | 2263494..2263877 | + | 384 | WP_124303251.1 | phage tail assembly chaperone | - |
| C4K29_RS10445 () | 2263925..2264197 | + | 273 | WP_124304723.1 | DUF1799 domain-containing protein | - |
| C4K29_RS10450 () | 2264225..2267221 | + | 2997 | WP_124303249.1 | phage tail tape measure protein | - |
| C4K29_RS10455 () | 2267221..2267559 | + | 339 | WP_081360850.1 | phage tail protein | - |
| C4K29_RS10460 () | 2267569..2268318 | + | 750 | WP_081360851.1 | phage minor tail protein L | - |
| C4K29_RS10465 () | 2268321..2269109 | + | 789 | WP_124304724.1 | C40 family peptidase | - |
| C4K29_RS32265 () | 2269106..2269276 | + | 171 | WP_164485756.1 | hypothetical protein | - |
| C4K29_RS10470 () | 2269260..2269505 | - | 246 | WP_124304725.1 | hypothetical protein | - |
| C4K29_RS10475 () | 2269719..2270015 | + | 297 | WP_124304726.1 | DUF4236 domain-containing protein | - |
| C4K29_RS10480 () | 2270136..2270942 | + | 807 | WP_124304727.1 | hypothetical protein | - |
| C4K29_RS10485 () | 2270973..2271395 | + | 423 | WP_124304728.1 | hypothetical protein | - |
| C4K29_RS10490 () | 2271439..2272047 | + | 609 | WP_124304729.1 | tail assembly protein | - |
| C4K29_RS10495 () | 2272106..2275672 | + | 3567 | WP_124304730.1 | phage tail protein | - |
| C4K29_RS10500 () | 2275681..2275992 | + | 312 | WP_164485798.1 | hypothetical protein | - |
| C4K29_RS10505 () | 2275992..2276672 | + | 681 | WP_124303239.1 | hypothetical protein | - |
| C4K29_RS10510 () | 2276708..2277799 | + | 1092 | WP_124303238.1 | hypothetical protein | - |
| C4K29_RS10515 () | 2277796..2278512 | + | 717 | WP_124303237.1 | hypothetical protein | - |
| C4K29_RS10520 () | 2278574..2278999 | + | 426 | WP_124304731.1 | structural protein | - |
| C4K29_RS10525 () | 2278996..2279367 | + | 372 | WP_124304732.1 | hypothetical protein | - |
| C4K29_RS10535 () | 2279629..2279844 | - | 216 | WP_124304734.1 | hypothetical protein | - |
| C4K29_RS10545 () | 2281555..2282592 | + | 1038 | WP_063429344.1 | hypothetical protein | - |
| C4K29_RS10550 () | 2283085..2284719 | - | 1635 | WP_081251606.1 | right-handed parallel beta-helix repeat-containing protein | - |
| C4K29_RS10555 () | 2285088..2285564 | + | 477 | WP_169912887.1 | DUF3757 domain-containing protein | - |
| C4K29_RS10560 () | 2285766..2286128 | + | 363 | WP_025804162.1 | NUDIX domain-containing protein | - |
| C4K29_RS10565 () | 2286285..2286635 | + | 351 | WP_102677063.1 | hypothetical protein | - |
| C4K29_RS10570 () | 2286965..2287594 | + | 630 | WP_102677052.1 | lytic polysaccharide monooxygenase | - |
| C4K29_RS10575 () | 2287641..2289104 | + | 1464 | WP_102677053.1 | chitinase | - |
| C4K29_RS10580 () | 2289239..2289700 | + | 462 | WP_063429348.1 | DUF2214 family protein | - |
| C4K29_RS10585 () | 2289775..2290023 | - | 249 | WP_009048117.1 | hypothetical protein | - |
| C4K29_RS10590 () | 2290367..2290561 | - | 195 | WP_007920550.1 | carbon storage regulator CsrA | - |
| C4K29_RS10595 () | 2290829..2291185 | + | 357 | WP_063429350.1 | hypothetical protein | - |
| C4K29_RS10600 () | 2291309..2291998 | - | 690 | WP_025804156.1 | endonuclease I family protein | - |
| C4K29_RS10605 () | 2292003..2292245 | - | 243 | WP_023968633.1 | DUF1654 domain-containing protein | - |
| C4K29_RS10610 () | 2292481..2293569 | - | 1089 | WP_025804155.1 | asparaginase | - |
| C4K29_RS10615 () | 2293893..2294342 | + | 450 | WP_025804154.1 | hypothetical protein | - |
| C4K29_RS10620 () | 2294592..2295548 | + | 957 | WP_025804153.1 | sugar ABC transporter substrate-binding protein | - |
| C4K29_RS10625 () | 2295606..2297159 | + | 1554 | WP_063429352.1 | sugar ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|