MGE detailed information
MGE type: Genomic_island MGE length: 13350 bp
Accession: NZ_CP027729 Location: 5089417..5102766 Organism: Pseudomonas sp. R3-18-08 Replicon: chromosome
Accession: NZ_CP027729 Location: 5089417..5102766 Organism: Pseudomonas sp. R3-18-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4J92_RS23350 () | 5084767..5085423 | + | 657 | WP_124405394.1 | DedA family protein | - |
| C4J92_RS23355 () | 5085430..5086245 | + | 816 | WP_124405395.1 | zinc-dependent peptidase | - |
| C4J92_RS23360 () | 5086354..5086881 | + | 528 | WP_003176323.1 | inorganic diphosphatase | - |
| C4J92_RS23365 () | 5087091..5087855 | + | 765 | WP_124405396.1 | helix-turn-helix transcriptional regulator | - |
| C4J92_RS23375 () | 5088098..5089201 | - | 1104 | WP_124371994.1 | DUF91 domain-containing protein | - |
| C4J92_RS23380 () | 5089417..5089653 | - | 237 | WP_124405397.1 | hypothetical protein | - |
| C4J92_RS23385 () | 5090152..5090724 | + | 573 | WP_124371995.1 | DUF4433 domain-containing protein | - |
| C4J92_RS23390 () | 5090721..5091365 | + | 645 | WP_124405398.1 | DUF4433 domain-containing protein | Toxin Detail |
| C4J92_RS23395 () | 5091362..5092456 | + | 1095 | WP_124371997.1 | macro domain-containing protein | Antitoxin Detail |
| C4J92_RS23400 () | 5092524..5092667 | + | 144 | Protein_4528 | hydrolase | - |
| C4J92_RS23405 () | 5092754..5093467 | - | 714 | Protein_4529 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| C4J92_RS23410 () | 5093457..5094221 | - | 765 | WP_124405399.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| C4J92_RS23415 () | 5094430..5095062 | + | 633 | WP_003239464.1 | hydrolase | - |
| C4J92_RS23420 () | 5095124..5096155 | - | 1032 | WP_124405400.1 | DUF1016 family protein | - |
| C4J92_RS23430 () | 5096349..5096525 | + | 177 | WP_124372000.1 | MerR family DNA-binding transcriptional regulator | - |
| C4J92_RS23435 () | 5096709..5101304 | + | 4596 | WP_124405401.1 | RHS repeat protein | - |
| C4J92_RS23440 () | 5101307..5101963 | + | 657 | WP_124405402.1 | hypothetical protein | - |
| C4J92_RS23445 () | 5102051..5102382 | + | 332 | Protein_4536 | hypothetical protein | - |
| C4J92_RS23450 () | 5102907..5104046 | + | 1140 | WP_124405403.1 | Fic family protein | - |
| C4J92_RS23455 () | 5104123..5104365 | + | 243 | WP_003176346.1 | exodeoxyribonuclease VII small subunit | - |
| C4J92_RS23460 () | 5104362..5105249 | + | 888 | WP_124405404.1 | (2E,6E)-farnesyl diphosphate synthase | - |
| C4J92_RS23465 () | 5105360..5107258 | + | 1899 | WP_124364581.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|