MGE detailed information
MGE type: Genomic_island MGE length: 12441 bp
Accession: NZ_CP027729 Location: 4733535..4745975 Organism: Pseudomonas sp. R3-18-08 Replicon: chromosome
Accession: NZ_CP027729 Location: 4733535..4745975 Organism: Pseudomonas sp. R3-18-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4J92_RS21665 () | 4728690..4730561 | - | 1872 | WP_124405206.1 | protein translocase subunit SecD | - |
| C4J92_RS21670 () | 4730624..4730962 | - | 339 | WP_003175975.1 | preprotein translocase subunit YajC | - |
| C4J92_RS21675 () | 4731006..4732121 | - | 1116 | WP_164485297.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| C4J92_RS21680 () | 4732127..4733176 | - | 1050 | WP_124405207.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| C4J92_RS21690 () | 4733535..4733843 | - | 309 | WP_124405208.1 | DUF3077 domain-containing protein | - |
| C4J92_RS21695 () | 4734357..4734728 | - | 372 | WP_124405209.1 | hypothetical protein | - |
| C4J92_RS21700 () | 4734718..4735251 | - | 534 | WP_124405210.1 | hypothetical protein | - |
| C4J92_RS21705 () | 4735469..4736188 | + | 720 | WP_124405211.1 | DUF91 domain-containing protein | - |
| C4J92_RS21710 () | 4736320..4737144 | + | 825 | WP_124405212.1 | GIY-YIG nuclease family protein | - |
| C4J92_RS21715 () | 4737257..4738366 | + | 1110 | WP_124405213.1 | hypothetical protein | VF |
| C4J92_RS21720 () | 4738496..4738831 | + | 336 | WP_124405214.1 | hypothetical protein | - |
| C4J92_RS21725 () | 4738902..4739252 | - | 351 | WP_124405846.1 | hypothetical protein | - |
| C4J92_RS21730 () | 4739464..4739793 | + | 330 | WP_124405215.1 | hypothetical protein | - |
| C4J92_RS21735 () | 4739755..4740402 | - | 648 | WP_124405216.1 | LysE family transporter | - |
| C4J92_RS21740 () | 4740668..4741360 | + | 693 | WP_124405847.1 | helix-turn-helix domain-containing protein | - |
| C4J92_RS21745 () | 4741362..4741997 | - | 636 | WP_124405217.1 | LysE family translocator | - |
| C4J92_RS21750 () | 4742134..4742505 | + | 372 | WP_124405218.1 | PH domain-containing protein | - |
| C4J92_RS21755 () | 4742624..4743199 | - | 576 | WP_124371779.1 | PIN domain-containing protein | Toxin Detail |
| C4J92_RS21760 () | 4743196..4743666 | - | 471 | WP_124405219.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C4J92_RS21765 () | 4743851..4744120 | + | 270 | Protein_4215 | detoxification | - |
| C4J92_RS21770 () | 4744173..4744460 | + | 288 | WP_124405220.1 | cloacin | - |
| C4J92_RS21775 () | 4744477..4744947 | + | 471 | WP_124405848.1 | hypothetical protein | - |
| C4J92_RS21780 () | 4744996..4745370 | - | 375 | WP_124364321.1 | cytochrome c family protein | - |
| C4J92_RS21785 () | 4745595..4745975 | + | 381 | WP_124364322.1 | response regulator | - |
| C4J92_RS21790 () | 4746169..4746783 | + | 615 | WP_124405221.1 | biliverdin-producing heme oxygenase | - |
| C4J92_RS21795 () | 4746780..4749023 | + | 2244 | WP_124405222.1 | GAF domain-containing protein | - |
| C4J92_RS21800 () | 4749042..4750361 | - | 1320 | WP_124405223.1 | HAMP domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|