MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 111333 bp
Accession: NZ_CP027726 Location: 621840..733172 Organism: Pseudomonas orientalis strain R4-35-08 Replicon: chromosome
Accession: NZ_CP027726 Location: 621840..733172 Organism: Pseudomonas orientalis strain R4-35-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4J95_RS02615 () | 618394..619149 | + | 756 | WP_057724256.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| C4J95_RS02620 () | 619458..619880 | + | 423 | WP_003236224.1 | 30S ribosomal protein S6 | - |
| C4J95_RS02625 () | 619909..620139 | + | 231 | WP_002551829.1 | 30S ribosomal protein S18 | - |
| C4J95_RS02630 () | 620176..621069 | + | 894 | WP_057724254.1 | hypothetical protein | - |
| C4J95_RS02635 () | 621088..621534 | + | 447 | WP_003171376.1 | 50S ribosomal protein L9 | - |
| C4J95_RS02640 () | 621646..623043 | + | 1398 | WP_003188079.1 | replicative DNA helicase | - |
| C4J95_RS02645 () | 623057..626476 | - | 3420 | WP_124360457.1 | hypothetical protein | - |
| C4J95_RS02650 () | 629107..631410 | + | 2304 | WP_124356785.1 | YgiQ family radical SAM protein | - |
| C4J95_RS02655 () | 631568..632500 | + | 933 | WP_124356786.1 | NAD synthetase | - |
| C4J95_RS02660 () | 632497..632946 | + | 450 | WP_124356787.1 | hypothetical protein | - |
| C4J95_RS02665 () | 633134..636424 | + | 3291 | WP_124356788.1 | transglutaminase family protein | - |
| C4J95_RS02670 () | 636598..639084 | + | 2487 | WP_124356789.1 | circularly permuted type 2 ATP-grasp protein | - |
| C4J95_RS02675 () | 639084..639974 | + | 891 | WP_124356790.1 | transglutaminase family protein | - |
| C4J95_RS02680 () | 640018..640200 | - | 183 | WP_124356791.1 | hypothetical protein | - |
| C4J95_RS02685 () | 640533..640979 | + | 447 | WP_057724237.1 | azurin | - |
| C4J95_RS02690 () | 641104..641931 | - | 828 | WP_124356792.1 | ammonia-dependent NAD(+) synthetase | - |
| C4J95_RS02695 () | 641935..643149 | - | 1215 | WP_057724233.1 | nicotinate phosphoribosyltransferase | - |
| C4J95_RS02700 () | 643358..644248 | - | 891 | WP_124356793.1 | LysR family transcriptional regulator | - |
| C4J95_RS02705 () | 644403..645893 | + | 1491 | WP_124356794.1 | aldehyde dehydrogenase family protein | - |
| C4J95_RS02710 () | 646065..647348 | + | 1284 | WP_124356795.1 | FAD-binding oxidoreductase | - |
| C4J95_RS02715 () | 647724..648860 | + | 1137 | WP_124356796.1 | branched-chain amino acid ABC transporter substrate-binding protein | - |
| C4J95_RS02720 () | 649062..649976 | + | 915 | WP_003188099.1 | branched-chain amino acid ABC transporter permease | - |
| C4J95_RS02725 () | 649979..651256 | + | 1278 | WP_124356797.1 | high-affinity branched-chain amino acid ABC transporter permease LivM | - |
| C4J95_RS02730 () | 651253..652128 | + | 876 | WP_124356798.1 | ATP-binding cassette domain-containing protein | - |
| C4J95_RS02735 () | 652125..652841 | + | 717 | WP_057724218.1 | ABC transporter ATP-binding protein | - |
| C4J95_RS02745 () | 653618..654382 | + | 765 | WP_124356799.1 | SDR family oxidoreductase | - |
| C4J95_RS02750 () | 654565..655470 | + | 906 | WP_124356800.1 | cation diffusion facilitator family transporter | - |
| C4J95_RS02755 () | 655579..656688 | - | 1110 | WP_124356801.1 | AGE family epimerase/isomerase | - |
| C4J95_RS02760 () | 656859..657431 | - | 573 | WP_124356802.1 | HupE/UreJ family protein | - |
| C4J95_RS02765 () | 657452..658066 | - | 615 | WP_057724209.1 | Urease accessory protein UreG | VF |
| C4J95_RS02770 () | 658088..658762 | - | 675 | WP_124356803.1 | urease accessory protein UreF | - |
| C4J95_RS02775 () | 658759..659259 | - | 501 | WP_124356804.1 | urease accessory protein UreE | - |
| C4J95_RS02780 () | 659611..660108 | + | 498 | WP_124356805.1 | Murein DD-endopeptidase MepH | VF |
| C4J95_RS02785 () | 660114..660746 | - | 633 | WP_027607712.1 | TetR family transcriptional regulator | - |
| C4J95_RS02790 () | 660898..661269 | - | 372 | WP_124356806.1 | hypothetical protein | - |
| C4J95_RS02795 () | 661627..663696 | + | 2070 | WP_124356807.1 | AsmA family protein | - |
| C4J95_RS02800 () | 663828..664358 | - | 531 | WP_057724197.1 | bacterioferritin | - |
| C4J95_RS02805 () | 664471..665346 | - | 876 | WP_124356808.1 | DMT family transporter | - |
| C4J95_RS02810 () | 665445..666233 | + | 789 | WP_124356809.1 | HTH-type transcriptional regulator NimR | VF |
| C4J95_RS02815 () | 666305..666604 | + | 300 | WP_124356810.1 | phosphate starvation-inducible protein PsiF | - |
| C4J95_RS02820 () | 666794..667807 | + | 1014 | WP_057724189.1 | AI-2E family transporter | - |
| C4J95_RS02825 () | 667932..669200 | - | 1269 | WP_124356811.1 | Hsp70 family protein | - |
| C4J95_RS02830 () | 669438..670376 | + | 939 | WP_124356812.1 | DnaJ domain-containing protein | - |
| C4J95_RS02835 () | 670428..672128 | - | 1701 | WP_124356813.1 | Urease subunit alpha | VF |
| C4J95_RS02840 () | 672264..672569 | - | 306 | WP_124356814.1 | Urease subunit beta | VF |
| C4J95_RS02845 () | 672566..673099 | - | 534 | WP_124356815.1 | GNAT family N-acetyltransferase | - |
| C4J95_RS02850 () | 673105..673617 | - | 513 | WP_124356816.1 | GNAT family N-acetyltransferase | - |
| C4J95_RS02855 () | 673627..673929 | - | 303 | WP_124356817.1 | Urease subunit gamma | VF |
| C4J95_RS02860 () | 674073..674912 | - | 840 | WP_124356818.1 | urease accessory protein UreD | - |
| C4J95_RS02865 () | 674945..675643 | - | 699 | WP_124356819.1 | urea ABC transporter ATP-binding subunit UrtE | - |
| C4J95_RS02870 () | 675777..676610 | - | 834 | WP_164484875.1 | urea ABC transporter ATP-binding protein UrtD | - |
| C4J95_RS02875 () | 676607..677674 | - | 1068 | WP_124356821.1 | urea ABC transporter permease subunit UrtC | - |
| C4J95_RS02880 () | 677674..679176 | - | 1503 | WP_124356822.1 | urea ABC transporter permease subunit UrtB | - |
| C4J95_RS02885 () | 679315..680580 | - | 1266 | WP_124356823.1 | urea ABC transporter substrate-binding protein | - |
| C4J95_RS02890 () | 680881..686781 | + | 5901 | WP_124356824.1 | DUF4329 domain-containing protein | - |
| C4J95_RS02895 () | 686830..688209 | - | 1380 | WP_124356825.1 | PepSY domain-containing protein | - |
| C4J95_RS02900 () | 688352..690412 | - | 2061 | WP_124356826.1 | TonB-dependent copper receptor | - |
| C4J95_RS02905 () | 690505..690912 | - | 408 | WP_124356827.1 | DUF2946 domain-containing protein | - |
| C4J95_RS02910 () | 690924..691406 | - | 483 | WP_124356828.1 | copper chaperone PCu(A)C | - |
| C4J95_RS02915 () | 691454..691846 | - | 393 | WP_124356829.1 | DUF2946 domain-containing protein | - |
| C4J95_RS02920 () | 691944..692231 | - | 288 | WP_124356830.1 | putative addiction module antidote protein | Antitoxin Detail |
| C4J95_RS02925 () | 692235..692534 | - | 300 | WP_124356831.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4J95_RS02930 () | 692821..693540 | - | 720 | WP_124356832.1 | cobalt-precorrin-6A reductase | - |
| C4J95_RS02935 () | 693537..694742 | - | 1206 | WP_124356833.1 | precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE | - |
| C4J95_RS02940 () | 694781..696127 | + | 1347 | WP_124356834.1 | precorrin-3B synthase | - |
| C4J95_RS02945 () | 696120..696746 | + | 627 | WP_124356835.1 | precorrin-8X methylmutase | - |
| C4J95_RS02950 () | 696746..697477 | + | 732 | WP_124356836.1 | precorrin-2 C(20)-methyltransferase | - |
| C4J95_RS02955 () | 697477..699114 | + | 1638 | WP_124356837.1 | precorrin-3B C(17)-methyltransferase | - |
| C4J95_RS02960 () | 699352..700131 | + | 780 | WP_124356838.1 | hypothetical protein | - |
| C4J95_RS02965 () | 700128..700724 | - | 597 | WP_065883442.1 | MarC family protein | - |
| C4J95_RS02970 () | 700927..702074 | + | 1148 | Protein_567 | IS3 family transposase ISPsy24 | Transposase |
| C4J95_RS02975 () | 702160..704931 | - | 2772 | WP_124356839.1 | Signal transduction histidine-protein kinase BarA | VF |
| C4J95_RS02980 () | 705032..706324 | - | 1293 | WP_124356840.1 | Phosphoribosylamine--glycine ligase | VF |
| C4J95_RS02985 () | 706461..708068 | - | 1608 | WP_124356841.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| C4J95_RS02990 () | 708150..708470 | - | 321 | WP_003221275.1 | DNA-binding transcriptional regulator Fis | - |
| C4J95_RS02995 () | 708467..709480 | - | 1014 | WP_124356842.1 | tRNA dihydrouridine synthase DusB | - |
| C4J95_RS03000 () | 709666..710883 | - | 1218 | WP_124356843.1 | DUF3426 domain-containing protein | - |
| C4J95_RS03005 () | 710914..711792 | - | 879 | WP_124356844.1 | 50S ribosomal protein L11 methyltransferase | - |
| C4J95_RS03010 () | 712067..713428 | - | 1362 | WP_057724124.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| C4J95_RS03015 () | 713446..713907 | - | 462 | WP_046070718.1 | acetyl-CoA carboxylase biotin carboxyl carrier protein | - |
| C4J95_RS03020 () | 713932..714387 | - | 456 | WP_057724120.1 | type II 3-dehydroquinate dehydratase | - |
| C4J95_RS03025 () | 714684..716645 | - | 1962 | WP_124356845.1 | Methyl-accepting chemotaxis protein CtpL | VF |
| C4J95_RS03030 () | 716699..718369 | - | 1671 | WP_124356846.1 | Response regulator PleD | VF |
| C4J95_RS03035 () | 718668..719735 | + | 1068 | WP_057724115.1 | DUF2333 family protein | - |
| C4J95_RS03040 () | 719738..720274 | + | 537 | WP_124356847.1 | NUDIX domain-containing protein | - |
| C4J95_RS03045 () | 720363..720734 | + | 372 | WP_057724111.1 | translation initiation factor Sui1 | - |
| C4J95_RS03050 () | 720877..722790 | + | 1914 | WP_124356848.1 | arginine decarboxylase | - |
| C4J95_RS03055 () | 722920..724263 | - | 1344 | WP_124356849.1 | MATE family efflux transporter | - |
| C4J95_RS03065 () | 724950..729848 | + | 4899 | WP_124356850.1 | alpha-2-macroglobulin family protein | - |
| C4J95_RS03070 () | 730001..730294 | - | 294 | WP_057726345.1 | hypothetical protein | - |
| C4J95_RS03075 () | 730386..732716 | + | 2331 | WP_124356851.1 | peptidoglycan glycosyltransferase PbpC | - |
| C4J95_RS03080 () | 732891..733199 | + | 309 | WP_003188211.1 | pyrophosphatase | - |
| C4J95_RS03085 () | 733192..733941 | + | 750 | WP_124356852.1 | methyltransferase domain-containing protein | - |
| C4J95_RS03090 () | 733966..734568 | + | 603 | WP_124356853.1 | DUF4136 domain-containing protein | - |
| C4J95_RS03095 () | 734613..735170 | + | 558 | WP_124356854.1 | DUF4136 domain-containing protein | - |
| C4J95_RS03100 () | 735607..737592 | + | 1986 | WP_124356855.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|