MGE detailed information
MGE type: Prophage MGE length: 91655 bp
Accession: NZ_CP027724 Location: 3843680..3935334 Organism: Pseudomonas orientalis strain L1-3-08 Replicon: chromosome
Accession: NZ_CP027724 Location: 3843680..3935334 Organism: Pseudomonas orientalis strain L1-3-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4J97_RS17070 () | 3842014..3842919 | + | 906 | WP_124424233.1 | hypothetical protein | - |
| C4J97_RS17080 () | 3843343..3843699 | - | 357 | WP_003174972.1 | MerR family transcriptional regulator | - |
| C4J97_RS17085 () | 3843680..3843982 | - | 303 | WP_002553164.1 | integration host factor subunit alpha | - |
| C4J97_RS17090 () | 3843986..3846364 | - | 2379 | WP_124424234.1 | phenylalanine--tRNA ligase subunit beta | - |
| C4J97_RS17095 () | 3846391..3847407 | - | 1017 | WP_003192486.1 | phenylalanine--tRNA ligase subunit alpha | - |
| C4J97_RS17100 () | 3847517..3847873 | - | 357 | WP_003192488.1 | 50S ribosomal protein L20 | - |
| C4J97_RS17105 () | 3847903..3848097 | - | 195 | WP_002553160.1 | 50S ribosomal protein L35 | - |
| C4J97_RS17110 () | 3848157..3848708 | - | 552 | WP_169960276.1 | translation initiation factor IF-3 | - |
| C4J97_RS17115 () | 3848708..3850630 | - | 1923 | WP_124424235.1 | threonine--tRNA ligase | - |
| C4J97_RS17120 () | 3850996..3851310 | + | 315 | WP_082631949.1 | hypothetical protein | - |
| C4J97_RS17125 () | 3851601..3851813 | + | 213 | WP_003234260.1 | cold-shock protein | - |
| C4J97_RS17130 () | 3851886..3852206 | - | 321 | WP_124424236.1 | hypothetical protein | - |
| C4J97_RS17135 () | 3852352..3852660 | - | 309 | WP_057721569.1 | hypothetical protein | - |
| C4J97_RS17140 () | 3852817..3853023 | + | 207 | WP_065934047.1 | hypothetical protein | - |
| C4J97_RS17145 () | 3853057..3854085 | - | 1029 | WP_124424237.1 | nucleoside hydrolase | - |
| C4J97_RS17150 () | 3854112..3854516 | - | 405 | WP_124424238.1 | D-ribose pyranase | - |
| C4J97_RS17155 () | 3854513..3855430 | - | 918 | WP_124424239.1 | ribokinase | - |
| C4J97_RS17160 () | 3855454..3856476 | - | 1023 | WP_124424240.1 | LacI family transcriptional regulator | - |
| C4J97_RS17165 () | 3856480..3857457 | - | 978 | WP_003174987.1 | ABC transporter permease | - |
| C4J97_RS17170 () | 3857454..3859007 | - | 1554 | WP_124424241.1 | hypothetical protein | VF |
| C4J97_RS17175 () | 3859065..3860024 | - | 960 | WP_124424242.1 | sugar ABC transporter substrate-binding protein | - |
| C4J97_RS17180 () | 3860477..3861565 | + | 1089 | WP_124424243.1 | asparaginase | - |
| C4J97_RS17185 () | 3861762..3862013 | + | 252 | WP_173667473.1 | DUF1654 domain-containing protein | - |
| C4J97_RS17190 () | 3862018..3862707 | + | 690 | WP_124424244.1 | endonuclease I family protein | - |
| C4J97_RS17195 () | 3862739..3863104 | - | 366 | WP_057721558.1 | hypothetical protein | - |
| C4J97_RS17200 () | 3863365..3863559 | + | 195 | WP_003192511.1 | carbon storage regulator CsrA | - |
| C4J97_RS17205 () | 3863765..3864028 | + | 264 | WP_124424245.1 | hypothetical protein | - |
| C4J97_RS17210 () | 3864010..3864705 | - | 696 | WP_124424246.1 | HAD family hydrolase | - |
| C4J97_RS17215 () | 3864910..3865170 | + | 261 | WP_124424247.1 | DUF2790 domain-containing protein | - |
| C4J97_RS17220 () | 3865213..3865884 | + | 672 | WP_124367657.1 | hypothetical protein | VF |
| C4J97_RS17225 () | 3865881..3867281 | + | 1401 | WP_124424248.1 | heavy metal sensor histidine kinase | - |
| C4J97_RS17230 () | 3867289..3867747 | - | 459 | WP_124424249.1 | RcnB family protein | - |
| C4J97_RS17235 () | 3867810..3868439 | - | 630 | WP_124424250.1 | pyroglutamyl-peptidase I | - |
| C4J97_RS17240 () | 3868447..3869397 | - | 951 | WP_124424251.1 | DUF979 domain-containing protein | - |
| C4J97_RS17245 () | 3869394..3870107 | - | 714 | WP_124424252.1 | DUF969 domain-containing protein | - |
| C4J97_RS17250 () | 3870724..3871011 | + | 288 | WP_124424253.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C4J97_RS17255 () | 3871001..3871324 | + | 324 | WP_124425635.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4J97_RS17260 () | 3871545..3871762 | + | 218 | Protein_3314 | hypothetical protein ; Integrase | Integrase |
| C4J97_RS17265 () | 3872239..3874179 | - | 1941 | WP_124424254.1 | methyl-accepting chemotaxis protein | - |
| C4J97_RS17270 () | 3874980..3875747 | - | 768 | WP_124424255.1 | DNA adenine methylase | - |
| C4J97_RS17275 () | 3875778..3877052 | - | 1275 | WP_124424256.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C4J97_RS17280 () | 3877045..3877470 | - | 426 | WP_065887144.1 | S24 family peptidase | - |
| C4J97_RS17285 () | 3877572..3878258 | + | 687 | WP_124424257.1 | SOS response-associated peptidase family protein | - |
| C4J97_RS17290 () | 3878245..3878763 | - | 519 | WP_124424258.1 | lysis system i-spanin subunit Rz | - |
| C4J97_RS17295 () | 3878760..3879185 | - | 426 | WP_124424259.1 | structural protein | - |
| C4J97_RS17300 () | 3879244..3879612 | - | 369 | WP_124424260.1 | phage tail protein | - |
| C4J97_RS17305 () | 3879615..3880121 | - | 507 | WP_124424261.1 | hypothetical protein | - |
| C4J97_RS17310 () | 3880132..3880776 | - | 645 | WP_124424262.1 | hypothetical protein | - |
| C4J97_RS17320 () | 3881108..3884833 | - | 3726 | WP_124424264.1 | DUF1983 domain-containing protein | - |
| C4J97_RS17325 () | 3884912..3885250 | + | 339 | WP_124424265.1 | YceK/YidQ family lipoprotein | - |
| C4J97_RS17330 () | 3885299..3885910 | - | 612 | WP_124358580.1 | tail assembly protein | - |
| C4J97_RS17335 () | 3885973..3886323 | - | 351 | WP_124424266.1 | hypothetical protein | - |
| C4J97_RS17340 () | 3886311..3887261 | - | 951 | WP_124424267.1 | NYN domain-containing protein | - |
| C4J97_RS17345 () | 3887654..3888016 | + | 363 | WP_124424268.1 | hypothetical protein | - |
| C4J97_RS17350 () | 3888098..3888295 | + | 198 | WP_124424269.1 | hypothetical protein | - |
| C4J97_RS27440 () | 3888278..3888442 | - | 165 | WP_164485102.1 | hypothetical protein | - |
| C4J97_RS17355 () | 3888477..3889232 | - | 756 | WP_124424270.1 | C40 family peptidase | - |
| C4J97_RS17360 () | 3889235..3889987 | - | 753 | WP_124424271.1 | phage minor tail protein L | - |
| C4J97_RS17365 () | 3889999..3890337 | - | 339 | WP_057009018.1 | phage tail protein | - |
| C4J97_RS17370 () | 3890337..3893381 | - | 3045 | WP_124424272.1 | phage tail tape measure protein | - |
| C4J97_RS17375 () | 3893409..3893711 | - | 303 | WP_124424273.1 | DUF1799 domain-containing protein | - |
| C4J97_RS17380 () | 3893729..3894109 | - | 381 | WP_101220449.1 | phage tail assembly chaperone | - |
| C4J97_RS17385 () | 3894113..3894769 | - | 657 | WP_124424274.1 | phage tail protein | - |
| C4J97_RS17390 () | 3894842..3895258 | - | 417 | WP_124424275.1 | DUF4128 domain-containing protein | - |
| C4J97_RS17395 () | 3895255..3895851 | - | 597 | WP_124424276.1 | hypothetical protein | - |
| C4J97_RS17400 () | 3895848..3896216 | - | 369 | WP_124424277.1 | hypothetical protein | - |
| C4J97_RS17405 () | 3896516..3897019 | - | 504 | WP_124424278.1 | hypothetical protein | - |
| C4J97_RS17410 () | 3897079..3897663 | - | 585 | WP_124424279.1 | hypothetical protein | - |
| C4J97_RS17415 () | 3897711..3898676 | - | 966 | WP_042572010.1 | Ig domain-containing protein | - |
| C4J97_RS17420 () | 3898689..3899417 | - | 729 | WP_124424280.1 | hypothetical protein | - |
| C4J97_RS17425 () | 3899518..3900129 | - | 612 | WP_124424281.1 | hypothetical protein | - |
| C4J97_RS17430 () | 3900153..3901241 | - | 1089 | WP_124424282.1 | minor capsid protein | - |
| C4J97_RS17435 () | 3901242..3902633 | - | 1392 | WP_124424283.1 | DUF4055 domain-containing protein | - |
| C4J97_RS17440 () | 3902630..3903931 | - | 1302 | WP_104503078.1 | terminase family protein | - |
| C4J97_RS17445 () | 3903918..3904379 | - | 462 | WP_104503079.1 | DUF2280 domain-containing protein | - |
| C4J97_RS17450 () | 3904411..3905025 | - | 615 | WP_124424284.1 | hypothetical protein | - |
| C4J97_RS17455 () | 3905101..3905433 | + | 333 | WP_104503081.1 | hypothetical protein | - |
| C4J97_RS17460 () | 3905597..3905845 | + | 249 | WP_124424285.1 | hypothetical protein | - |
| C4J97_RS17465 () | 3905868..3906212 | - | 345 | WP_124424286.1 | hypothetical protein | - |
| C4J97_RS17470 () | 3906209..3906547 | - | 339 | WP_010211438.1 | hypothetical protein | - |
| C4J97_RS17475 () | 3907254..3907445 | - | 192 | WP_124424287.1 | Com family DNA-binding transcriptional regulator | - |
| C4J97_RS17480 () | 3907749..3908330 | - | 582 | WP_124424288.1 | hypothetical protein | - |
| C4J97_RS17485 () | 3908327..3908971 | - | 645 | WP_124424289.1 | recombination protein NinG | - |
| C4J97_RS17490 () | 3908968..3909483 | - | 516 | WP_124424290.1 | hypothetical protein | - |
| C4J97_RS17495 () | 3909480..3909956 | - | 477 | WP_124424291.1 | hypothetical protein | - |
| C4J97_RS17500 () | 3909953..3910372 | - | 420 | WP_124424292.1 | hypothetical protein | - |
| C4J97_RS17505 () | 3910369..3910644 | - | 276 | WP_124424293.1 | hypothetical protein | - |
| C4J97_RS17510 () | 3910641..3911441 | - | 801 | WP_124424294.1 | Replication protein P | - |
| C4J97_RS17515 () | 3911438..3912232 | - | 795 | WP_124424295.1 | Pyocin large subunit-like protein | - |
| C4J97_RS17520 () | 3912232..3913041 | - | 810 | WP_124424296.1 | Rha family transcriptional regulator | - |
| C4J97_RS17525 () | 3913112..3913534 | - | 423 | WP_003175051.1 | phage regulatory CII family protein | - |
| C4J97_RS17530 () | 3913617..3913844 | - | 228 | WP_074900406.1 | helix-turn-helix transcriptional regulator | - |
| C4J97_RS17535 () | 3913951..3914784 | + | 834 | WP_124424297.1 | helix-turn-helix domain-containing protein | - |
| C4J97_RS17540 () | 3915111..3916871 | + | 1761 | WP_124424298.1 | ATP-binding protein | - |
| C4J97_RS17545 () | 3916936..3917814 | + | 879 | WP_124424299.1 | DNA adenine methylase | - |
| C4J97_RS17550 () | 3917894..3918109 | + | 216 | WP_124424300.1 | hypothetical protein | - |
| C4J97_RS17555 () | 3918180..3918659 | + | 480 | WP_124424301.1 | hypothetical protein | - |
| C4J97_RS17560 () | 3918711..3919022 | - | 312 | WP_124424302.1 | DUF1654 domain-containing protein | - |
| C4J97_RS17565 () | 3919484..3919918 | + | 435 | WP_065932930.1 | tellurite resistance TerB family protein | - |
| C4J97_RS17570 () | 3919921..3920100 | + | 180 | WP_124424303.1 | hypothetical protein | - |
| C4J97_RS17575 () | 3920084..3920302 | + | 219 | WP_083227299.1 | hypothetical protein | - |
| C4J97_RS17580 () | 3920407..3920598 | + | 192 | WP_124424304.1 | hypothetical protein | - |
| C4J97_RS17585 () | 3920660..3920977 | + | 318 | WP_124424305.1 | hypothetical protein | - |
| C4J97_RS17590 () | 3921542..3921943 | + | 402 | WP_124424306.1 | hypothetical protein | - |
| C4J97_RS17595 () | 3921975..3922307 | + | 333 | WP_124424307.1 | hypothetical protein | - |
| C4J97_RS17600 () | 3922330..3922755 | + | 426 | WP_124424308.1 | hypothetical protein | - |
| C4J97_RS17605 () | 3922752..3922967 | + | 216 | WP_106111222.1 | hypothetical protein | - |
| C4J97_RS17610 () | 3922964..3923167 | + | 204 | WP_124424309.1 | hypothetical protein | - |
| C4J97_RS17615 () | 3923502..3923795 | + | 294 | WP_124424310.1 | hypothetical protein | - |
| C4J97_RS17620 () | 3923838..3924575 | + | 738 | WP_124424311.1 | hypothetical protein | - |
| C4J97_RS17625 () | 3924572..3925135 | + | 564 | WP_124424312.1 | siphovirus Gp157 family protein | - |
| C4J97_RS17630 () | 3925146..3925739 | + | 594 | WP_124424313.1 | hypothetical protein | - |
| C4J97_RS17635 () | 3925809..3926138 | + | 330 | WP_124424314.1 | hypothetical protein | - |
| C4J97_RS17640 () | 3926178..3926921 | - | 744 | WP_124424315.1 | hypothetical protein | - |
| C4J97_RS17645 () | 3927017..3927577 | - | 561 | WP_124425636.1 | GNAT family N-acetyltransferase | - |
| C4J97_RS17650 () | 3928022..3929827 | + | 1806 | WP_124424316.1 | DNA cytosine methyltransferase | - |
| C4J97_RS17655 () | 3929872..3930399 | + | 528 | WP_124424317.1 | hypothetical protein | - |
| C4J97_RS17660 () | 3930649..3930852 | + | 204 | Protein_3394 | hypothetical protein | - |
| C4J97_RS17665 () | 3931297..3931728 | + | 432 | WP_122458373.1 | hypothetical protein | - |
| C4J97_RS17670 () | 3931824..3932102 | + | 279 | WP_124424318.1 | hypothetical protein | - |
| C4J97_RS17675 () | 3932152..3932397 | + | 246 | WP_124424319.1 | hypothetical protein | - |
| C4J97_RS17680 () | 3932394..3933119 | + | 726 | WP_124424320.1 | hypothetical protein | - |
| C4J97_RS17685 () | 3933330..3933527 | + | 198 | Protein_3399 | hypothetical protein | - |
| C4J97_RS17690 () | 3933744..3933962 | + | 219 | WP_124424321.1 | hypothetical protein | - |
| C4J97_RS17695 () | 3933965..3934198 | + | 234 | WP_034134173.1 | hypothetical protein | - |
| C4J97_RS17700 () | 3934198..3935334 | + | 1137 | WP_124424322.1 | hypothetical protein ; Integrase | Integrase |
| C4J97_RS17710 () | 3935705..3936988 | + | 1284 | WP_124424323.1 | FAD-binding oxidoreductase | - |
| C4J97_RS17730 () | 3937636..3938400 | - | 765 | WP_124424324.1 | SDR family oxidoreductase | - |
| C4J97_RS17735 () | 3938412..3939623 | - | 1212 | WP_124424325.1 | O-succinylhomoserine sulfhydrylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|