MGE detailed information
MGE type: Genomic_island MGE length: 24267 bp
Accession: NZ_CP027717 Location: 2302493..2326759 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain PCM 2210 Replicon: chromosome
Accession: NZ_CP027717 Location: 2302493..2326759 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain PCM 2210 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4K16_RS10520 () | 2297658..2298761 | + | 1104 | WP_124298949.1 | 2,3-butanediol dehydrogenase | - |
| C4K16_RS10525 () | 2298863..2299492 | - | 630 | WP_081362146.1 | HAD family phosphatase | - |
| C4K16_RS10530 () | 2299642..2300256 | - | 615 | WP_124298950.1 | hypothetical protein | - |
| C4K16_RS31135 () | 2300307..2300450 | - | 144 | WP_158484746.1 | hypothetical protein | - |
| C4K16_RS10535 () | 2300558..2302330 | - | 1773 | WP_053268618.1 | acyl-CoA dehydrogenase C-terminal domain-containing protein | - |
| C4K16_RS10540 () | 2302493..2304115 | - | 1623 | WP_009048151.1 | acyl-CoA synthetase | - |
| C4K16_RS10545 () | 2304459..2306348 | + | 1890 | WP_124336303.1 | PAS domain S-box protein | - |
| C4K16_RS10550 () | 2306345..2306980 | + | 636 | WP_124336304.1 | response regulator transcription factor | - |
| C4K16_RS10555 () | 2307073..2307882 | + | 810 | WP_124336305.1 | hypothetical protein | - |
| C4K16_RS10565 () | 2308550..2308951 | - | 402 | WP_007923747.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| C4K16_RS10570 () | 2309303..2309584 | - | 282 | WP_124336306.1 | hypothetical protein | - |
| C4K16_RS10575 () | 2310006..2310362 | - | 357 | WP_103330827.1 | hypothetical protein | - |
| C4K16_RS10580 () | 2310347..2311129 | - | 783 | WP_110175430.1 | hypothetical protein | - |
| C4K16_RS10585 () | 2311140..2311685 | - | 546 | WP_124336307.1 | PAAR domain-containing protein | - |
| C4K16_RS10590 () | 2312004..2316599 | + | 4596 | WP_124336308.1 | ATP-binding protein | - |
| C4K16_RS10595 () | 2316645..2317751 | + | 1107 | WP_124336309.1 | hypothetical protein | - |
| C4K16_RS10600 () | 2318028..2318576 | - | 549 | WP_124336310.1 | hypothetical protein | - |
| C4K16_RS10605 () | 2318984..2319637 | + | 654 | WP_124334446.1 | peroxiredoxin | - |
| C4K16_RS10610 () | 2320104..2320655 | + | 552 | WP_028682904.1 | GNAT family N-acetyltransferase | - |
| C4K16_RS10615 () | 2320779..2321447 | + | 669 | WP_124336311.1 | ABC transporter ATP-binding protein | - |
| C4K16_RS10620 () | 2321413..2323929 | + | 2517 | WP_164485493.1 | FtsX-like permease family protein | - |
| C4K16_RS10625 () | 2323919..2324995 | + | 1077 | WP_124336312.1 | iron ABC transporter permease | - |
| C4K16_RS10630 () | 2325109..2325696 | + | 588 | WP_124336313.1 | hypothetical protein | - |
| C4K16_RS10635 () | 2326096..2326386 | - | 291 | WP_038580367.1 | putative addiction module antidote protein | Antitoxin Detail |
| C4K16_RS10640 () | 2326388..2326666 | - | 279 | WP_124337412.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4K16_RS10645 () | 2326915..2328309 | - | 1395 | WP_124336314.1 | VOC family protein | - |
| C4K16_RS10650 () | 2328574..2329698 | + | 1125 | WP_124336315.1 | diguanylate cyclase | - |
| C4K16_RS10655 () | 2329792..2331036 | + | 1245 | WP_124336316.1 | M20/M25/M40 family metallo-hydrolase | - |
| C4K16_RS10660 () | 2331306..2331704 | + | 399 | WP_023968692.1 | carboxymuconolactone decarboxylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|