MGE detailed information
MGE type: Prophage MGE length: 58273 bp
Accession: NZ_CP027710 Location: 4626077..4684349 Organism: Pseudomonas chlororaphis subsp. piscium strain SLPH10 Replicon: chromosome
Accession: NZ_CP027710 Location: 4626077..4684349 Organism: Pseudomonas chlororaphis subsp. piscium strain SLPH10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4K35_RS20480 () | 4623094..4623381 | - | 288 | WP_157832225.1 | HU family DNA-binding protein | - |
| C4K35_RS20485 () | 4623517..4625913 | - | 2397 | WP_009044652.1 | endopeptidase La | - |
| C4K35_RS20490 () | 4626077..4627360 | - | 1284 | WP_007927204.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| C4K35_RS20495 () | 4627467..4628108 | - | 642 | WP_007927205.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | - |
| C4K35_RS20500 () | 4628202..4629512 | - | 1311 | WP_063432087.1 | trigger factor | - |
| C4K35_RS20520 () | 4630550..4631404 | + | 855 | WP_063432089.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| C4K35_RS20525 () | 4631790..4632308 | - | 519 | WP_124303121.1 | lysis system i-spanin subunit Rz | - |
| C4K35_RS20530 () | 4632308..4632733 | - | 426 | WP_124303122.1 | cell wall hydrolase | - |
| C4K35_RS20535 () | 4632796..4633512 | - | 717 | WP_124303123.1 | hypothetical protein | - |
| C4K35_RS20540 () | 4633643..4634599 | - | 957 | WP_124303124.1 | phage tail protein | - |
| C4K35_RS20545 () | 4634635..4635315 | - | 681 | WP_124303125.1 | hypothetical protein | - |
| C4K35_RS20550 () | 4635315..4635638 | - | 324 | WP_124303126.1 | hypothetical protein | - |
| C4K35_RS20555 () | 4635635..4639201 | - | 3567 | WP_124303127.1 | phage tail protein | - |
| C4K35_RS20560 () | 4639350..4639631 | + | 282 | WP_124303128.1 | hypothetical protein | - |
| C4K35_RS20565 () | 4639695..4640291 | - | 597 | WP_124303129.1 | tail assembly protein | - |
| C4K35_RS20570 () | 4640344..4640691 | - | 348 | WP_124303130.1 | hypothetical protein | - |
| C4K35_RS20575 () | 4640722..4641528 | - | 807 | WP_124303131.1 | hypothetical protein | - |
| C4K35_RS20580 () | 4641658..4642080 | - | 423 | WP_124303132.1 | hypothetical protein | - |
| C4K35_RS20585 () | 4642077..4642559 | - | 483 | WP_124303133.1 | ImmA/IrrE family metallo-endopeptidase | - |
| C4K35_RS20590 () | 4642824..4643069 | + | 246 | WP_124303134.1 | hypothetical protein | - |
| C4K35_RS33155 () | 4643053..4643223 | - | 171 | WP_164486716.1 | hypothetical protein | - |
| C4K35_RS20595 () | 4643249..4644013 | - | 765 | WP_124303135.1 | C40 family peptidase | - |
| C4K35_RS20600 () | 4644016..4644765 | - | 750 | WP_124303136.1 | phage minor tail protein L | - |
| C4K35_RS20605 () | 4644775..4645113 | - | 339 | WP_124303137.1 | phage tail protein | - |
| C4K35_RS20610 () | 4645113..4648115 | - | 3003 | WP_124303138.1 | phage tail tape measure protein | - |
| C4K35_RS20615 () | 4648143..4648403 | - | 261 | WP_080710567.1 | DUF1799 domain-containing protein | - |
| C4K35_RS20620 () | 4648466..4648849 | - | 384 | WP_028682498.1 | phage tail assembly chaperone | - |
| C4K35_RS20625 () | 4648859..4649512 | - | 654 | WP_124303139.1 | phage tail protein | - |
| C4K35_RS20630 () | 4649583..4649999 | - | 417 | WP_124303140.1 | DUF4128 domain-containing protein | - |
| C4K35_RS20635 () | 4649996..4650592 | - | 597 | WP_124303141.1 | hypothetical protein | - |
| C4K35_RS20640 () | 4650589..4650960 | - | 372 | WP_124303142.1 | hypothetical protein | - |
| C4K35_RS20645 () | 4650977..4651480 | - | 504 | WP_124303143.1 | hypothetical protein | - |
| C4K35_RS20650 () | 4651484..4651792 | - | 309 | WP_124303144.1 | hypothetical protein | - |
| C4K35_RS20655 () | 4651837..4652790 | - | 954 | WP_124303145.1 | Ig domain-containing protein | - |
| C4K35_RS20660 () | 4652802..4653530 | - | 729 | WP_124303146.1 | hypothetical protein | - |
| C4K35_RS20665 () | 4653610..4654074 | - | 465 | WP_124303147.1 | hypothetical protein | - |
| C4K35_RS20670 () | 4654110..4655195 | - | 1086 | WP_124303148.1 | minor capsid protein | - |
| C4K35_RS20675 () | 4655170..4656588 | - | 1419 | WP_124303149.1 | DUF4055 domain-containing protein | - |
| C4K35_RS20680 () | 4656585..4657886 | - | 1302 | WP_124303150.1 | terminase family protein | - |
| C4K35_RS20685 () | 4657873..4658334 | - | 462 | WP_124303151.1 | DUF2280 domain-containing protein | - |
| C4K35_RS20690 () | 4658367..4658990 | - | 624 | WP_124303152.1 | hypothetical protein | - |
| C4K35_RS20695 () | 4659316..4659528 | - | 213 | WP_124303153.1 | hypothetical protein | - |
| C4K35_RS20700 () | 4659762..4659968 | + | 207 | WP_124303154.1 | hypothetical protein | - |
| C4K35_RS20705 () | 4660000..4660254 | - | 255 | WP_124303155.1 | hypothetical protein | - |
| C4K35_RS20710 () | 4660251..4660538 | - | 288 | WP_124303156.1 | hypothetical protein | - |
| C4K35_RS20715 () | 4660600..4660896 | - | 297 | WP_124303157.1 | hypothetical protein | - |
| C4K35_RS20720 () | 4660902..4661234 | - | 333 | WP_041983323.1 | phage holin, lambda family | - |
| C4K35_RS20725 () | 4661433..4661903 | - | 471 | WP_124303158.1 | hypothetical protein | - |
| C4K35_RS20730 () | 4662094..4662378 | - | 285 | WP_124303159.1 | hypothetical protein | - |
| C4K35_RS20735 () | 4662574..4662960 | - | 387 | WP_062823014.1 | antitermination protein Q | - |
| C4K35_RS20740 () | 4662957..4663226 | - | 270 | WP_062823015.1 | hypothetical protein | - |
| C4K35_RS20745 () | 4663244..4664605 | - | 1362 | WP_124303160.1 | AAA family ATPase | - |
| C4K35_RS20750 () | 4664602..4665408 | - | 807 | WP_164486717.1 | ATP-binding protein | - |
| C4K35_RS20755 () | 4665389..4666195 | - | 807 | WP_124303161.1 | helix-turn-helix domain-containing protein | - |
| C4K35_RS20765 () | 4666410..4666673 | - | 264 | WP_124303163.1 | hypothetical protein | - |
| C4K35_RS20770 () | 4666670..4667002 | - | 333 | WP_124303164.1 | hypothetical protein | - |
| C4K35_RS20775 () | 4666999..4667436 | - | 438 | WP_124303165.1 | hypothetical protein | - |
| C4K35_RS20780 () | 4667659..4668081 | - | 423 | WP_124303166.1 | Rha family transcriptional regulator | - |
| C4K35_RS20785 () | 4668206..4668451 | - | 246 | WP_124303167.1 | helix-turn-helix domain-containing protein | - |
| C4K35_RS20790 () | 4668550..4668975 | + | 426 | WP_124303168.1 | hypothetical protein | - |
| C4K35_RS20795 () | 4669090..4669599 | - | 510 | WP_124303169.1 | type II toxin-antitoxin system YhaV family toxin | - |
| C4K35_RS20800 () | 4669602..4669802 | - | 201 | WP_124303170.1 | hypothetical protein | - |
| C4K35_RS20805 () | 4670251..4671045 | - | 795 | WP_124303171.1 | phage antirepressor KilAC domain-containing protein | - |
| C4K35_RS20810 () | 4671045..4671353 | - | 309 | WP_124303172.1 | DUF3077 domain-containing protein | - |
| C4K35_RS20815 () | 4671426..4671581 | - | 156 | WP_124303173.1 | Arc family DNA-binding protein | - |
| C4K35_RS20820 () | 4671698..4672126 | + | 429 | WP_124303174.1 | Arc family DNA-binding protein | - |
| C4K35_RS20825 () | 4672423..4673148 | - | 726 | WP_124303175.1 | hypothetical protein | - |
| C4K35_RS20830 () | 4673188..4674009 | - | 822 | WP_124303176.1 | hypothetical protein | - |
| C4K35_RS20835 () | 4674486..4674911 | + | 426 | WP_124303177.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| C4K35_RS20840 () | 4675037..4675315 | + | 279 | WP_096373593.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4K35_RS20845 () | 4675325..4675630 | + | 306 | WP_124303178.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| C4K35_RS20850 () | 4675784..4677013 | + | 1230 | WP_124303179.1 | hypothetical protein | - |
| C4K35_RS20855 () | 4677074..4677547 | - | 474 | WP_124303180.1 | hypothetical protein | - |
| C4K35_RS20860 () | 4677776..4678804 | + | 1029 | WP_124303181.1 | virulence RhuM family protein | - |
| C4K35_RS20865 () | 4678850..4679089 | - | 240 | WP_124303182.1 | hypothetical protein | - |
| C4K35_RS20870 () | 4679116..4679427 | - | 312 | WP_124303183.1 | hypothetical protein | - |
| C4K35_RS20875 () | 4679672..4679902 | - | 231 | WP_124303184.1 | hypothetical protein | - |
| C4K35_RS20880 () | 4679926..4680168 | - | 243 | WP_124303185.1 | hypothetical protein | - |
| C4K35_RS20885 () | 4680214..4680423 | - | 210 | WP_124303186.1 | hypothetical protein | - |
| C4K35_RS20890 () | 4680514..4681026 | - | 513 | WP_124303187.1 | hypothetical protein | - |
| C4K35_RS20895 () | 4681191..4681538 | - | 348 | Protein_4099 | hypothetical protein | - |
| C4K35_RS20905 () | 4682104..4682406 | + | 303 | Protein_4100 | hypothetical protein | - |
| C4K35_RS20910 () | 4682726..4682929 | + | 204 | WP_124303189.1 | hypothetical protein | - |
| C4K35_RS20920 () | 4683153..4684349 | + | 1197 | WP_124303190.1 | site-specific integrase | - |
| C4K35_RS20925 () | 4684472..4685410 | + | 939 | WP_063432091.1 | D-alanyl-D-alanine endopeptidase | - |
| C4K35_RS20930 () | 4685502..4686176 | - | 675 | WP_025804781.1 | PA2778 family cysteine peptidase | - |
| C4K35_RS33160 () | 4686398..4686565 | + | 168 | WP_164485783.1 | hypothetical protein | - |
| C4K35_RS20935 () | 4686645..4687406 | - | 762 | WP_007927218.1 | TerC family protein | - |
| C4K35_RS20940 () | 4687438..4687686 | - | 249 | WP_025804783.1 | hypothetical protein | - |
| C4K35_RS20945 () | 4687823..4688728 | + | 906 | WP_023964284.1 | transcriptional activator NhaR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|