MGE detailed information
MGE type: Genomic_island MGE length: 33353 bp
Accession: NZ_CP027701 Location: 1051927..1085279 Organism: Escherichia coli strain 675SK2 Replicon: chromosome
Accession: NZ_CP027701 Location: 1051927..1085279 Organism: Escherichia coli strain 675SK2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYU58_RS05300 () | 1047503..1051734 | + | 4232 | Protein_952 | RHS domain-containing protein | - |
| CYU58_RS05305 () | 1051712..1051930 | + | 219 | WP_001101841.1 | hypothetical protein | - |
| CYU58_RS26580 () | 1051927..1052103 | + | 177 | WP_000008098.1 | hypothetical protein | - |
| CYU58_RS05310 () | 1052534..1053670 | + | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| CYU58_RS05315 () | 1053711..1054481 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| CYU58_RS05320 () | 1054662..1055108 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| CYU58_RS05325 () | 1055151..1057595 | - | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| CYU58_RS05330 () | 1057835..1058413 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| CYU58_RS05335 () | 1058619..1059386 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| CYU58_RS05340 () | 1059357..1060097 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| CYU58_RS05345 () | 1060253..1060531 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| CYU58_RS05350 () | 1060534..1060794 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| CYU58_RS05355 () | 1061004..1061753 | + | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| CYU58_RS05360 () | 1061929..1062426 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| CYU58_RS05365 () | 1062650..1064362 | - | 1713 | Protein_966 | Flagellar biosynthesis protein FlhA | VF |
| CYU58_RS05370 () | 1064334..1065119 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| CYU58_RS05375 () | 1065190..1066245 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| CYU58_RS05380 () | 1066297..1066590 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| CYU58_RS05385 () | 1066593..1066991 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| CYU58_RS05390 () | 1067001..1067453 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| CYU58_RS05395 () | 1067771..1067977 | + | 207 | Protein_972 | RtcB family protein | - |
| CYU58_RS05400 () | 1067973..1068494 | + | 522 | Protein_973 | peptide chain release factor H | - |
| CYU58_RS05405 () | 1068551..1070008 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| CYU58_RS05410 () | 1070269..1070727 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CYU58_RS05415 () | 1070819..1072063 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 1071323..1071403 | + | 81 | NuclAT_13 | - | - |
| - () | 1071323..1071403 | + | 81 | NuclAT_13 | - | - |
| - () | 1071323..1071403 | + | 81 | NuclAT_13 | - | - |
| - () | 1071323..1071403 | + | 81 | NuclAT_13 | - | - |
| CYU58_RS05420 () | 1072121..1072522 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| CYU58_RS05425 () | 1072561..1073616 | - | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| CYU58_RS05430 () | 1073904..1075007 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CYU58_RS05435 () | 1075019..1076272 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CYU58_RS05445 () | 1076626..1077834 | + | 1209 | WP_000772656.1 | hypothetical protein ; Integrase | Integrase |
| CYU58_RS05450 () | 1078076..1079284 | + | 1209 | WP_001087767.1 | type I restriction-modification system subunit M | - |
| CYU58_RS05455 () | 1079277..1080983 | + | 1707 | WP_000132880.1 | zinc ribbon domain-containing protein | - |
| CYU58_RS05460 () | 1080961..1082031 | + | 1071 | WP_000920172.1 | hypothetical protein | - |
| CYU58_RS05465 () | 1082432..1082998 | - | 567 | Protein_985 | IS21 family transposase IS100 | Transposase |
| CYU58_RS26800 () | 1083020..1083274 | - | 255 | Protein_986 | IS21 family transposase IS100 | Transposase |
| CYU58_RS05475 () | 1083324..1084292 | - | 969 | Protein_987 | IS21 family transposase IS100kyp | Transposase |
| CYU58_RS05485 () | 1084376..1084645 | - | 270 | Protein_988 | class I SAM-dependent methyltransferase | - |
| CYU58_RS05490 () | 1084656..1084913 | - | 258 | WP_001333700.1 | YjhX family toxin | - |
| CYU58_RS05495 () | 1085211..1085279 | - | 69 | Protein_990 | VOC family protein | - |
| CYU58_RS05500 () | 1085288..1086031 | - | 744 | WP_001081495.1 | epimerase | - |
| CYU58_RS05505 () | 1086042..1086332 | - | 291 | WP_000558519.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
| CYU58_RS05510 () | 1086381..1087256 | - | 876 | WP_000774153.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| CYU58_RS05515 () | 1087285..1088307 | - | 1023 | WP_000155278.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| CYU58_RS05520 () | 1088334..1089332 | - | 999 | WP_000197460.1 | autoinducer 2 ABC transporter permease LsrD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|