MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 56758 bp
Accession: NZ_CP027663 Location: 2181035..2237792 Organism: Acidiferrobacter sp. SPIII_3 Replicon: chromosome
Accession: NZ_CP027663 Location: 2181035..2237792 Organism: Acidiferrobacter sp. SPIII_3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4901_RS10980 () | 2176182..2176859 | - | 678 | WP_110137364.1 | DUF1345 domain-containing protein | - |
| C4901_RS10985 () | 2176868..2178289 | - | 1422 | WP_168185687.1 | PQQ-binding-like beta-propeller repeat protein | - |
| C4901_RS10990 () | 2178499..2180223 | + | 1725 | WP_110137366.1 | ABC transporter ATP-binding protein/permease | - |
| C4901_RS10995 () | 2180179..2180934 | - | 756 | WP_110138624.1 | DUF2470 domain-containing protein | - |
| C4901_RS11005 () | 2181168..2182142 | + | 975 | WP_110137367.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C4901_RS11010 () | 2182235..2185018 | + | 2784 | WP_110137368.1 | class I SAM-dependent DNA methyltransferase | - |
| C4901_RS11015 () | 2185015..2187129 | + | 2115 | WP_110137369.1 | DEAD/DEAH box helicase | - |
| C4901_RS11020 () | 2187132..2188337 | + | 1206 | WP_110138625.1 | GIY-YIG nuclease family protein | - |
| C4901_RS17310 () | 2188342..2189232 | + | 891 | WP_145960700.1 | hypothetical protein | - |
| C4901_RS17315 () | 2189364..2190647 | - | 1284 | WP_145960701.1 | hypothetical protein | - |
| C4901_RS11035 () | 2191025..2191909 | - | 885 | WP_110137372.1 | GTP-binding protein | - |
| C4901_RS17725 () | 2191906..2192082 | - | 177 | WP_168185688.1 | hypothetical protein | - |
| C4901_RS11040 () | 2192086..2192292 | - | 207 | WP_110137373.1 | hypothetical protein | - |
| C4901_RS11045 () | 2192371..2194395 | - | 2025 | WP_110137374.1 | type IV secretion system DNA-binding domain-containing protein | - |
| C4901_RS11050 () | 2194392..2194793 | - | 402 | WP_110137375.1 | hypothetical protein | - |
| C4901_RS11055 () | 2194871..2195062 | - | 192 | WP_110137376.1 | hypothetical protein | - |
| C4901_RS11060 () | 2195085..2195543 | - | 459 | WP_110137377.1 | hypothetical protein | - |
| C4901_RS11065 () | 2195836..2197398 | - | 1563 | WP_168185689.1 | type IV secretion system DNA-binding domain-containing protein | - |
| C4901_RS11070 () | 2197424..2197969 | - | 546 | WP_110137379.1 | hypothetical protein | - |
| C4901_RS11075 () | 2198221..2201109 | - | 2889 | WP_110137380.1 | relaxase domain-containing protein | - |
| C4901_RS11080 () | 2201749..2202126 | + | 378 | WP_110137381.1 | hypothetical protein | - |
| C4901_RS11085 () | 2202203..2202928 | + | 726 | WP_110137382.1 | hypothetical protein | - |
| C4901_RS11090 () | 2202998..2203723 | + | 726 | WP_110137383.1 | hypothetical protein | - |
| C4901_RS11095 () | 2204095..2204499 | - | 405 | WP_110137384.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| C4901_RS11100 () | 2204502..2204801 | - | 300 | WP_110137385.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| C4901_RS11105 () | 2205118..2207727 | - | 2610 | WP_145960702.1 | hypothetical protein | - |
| C4901_RS17320 () | 2208500..2209222 | - | 723 | WP_145960703.1 | hypothetical protein | - |
| C4901_RS11110 () | 2209225..2209497 | - | 273 | WP_110137387.1 | helix-turn-helix domain-containing protein | - |
| C4901_RS11115 () | 2209588..2210604 | + | 1017 | WP_110137388.1 | hypothetical protein | - |
| C4901_RS17730 () | 2211041..2211196 | + | 156 | WP_168185690.1 | hypothetical protein | - |
| C4901_RS11120 () | 2211186..2213525 | + | 2340 | WP_110137389.1 | AAA family ATPase | - |
| C4901_RS11125 () | 2213522..2215438 | + | 1917 | WP_110137390.1 | ATP-dependent helicase | - |
| C4901_RS11130 () | 2215770..2217152 | - | 1383 | WP_205735957.1 | group II intron reverse transcriptase/maturase | - |
| C4901_RS11135 () | 2217702..2218073 | + | 372 | WP_065971441.1 | hypothetical protein | - |
| C4901_RS11140 () | 2218079..2218435 | + | 357 | WP_110137391.1 | IS66 family transposase ISPa30 | Transposase |
| C4901_RS11145 () | 2218492..2220072 | + | 1581 | WP_110138626.1 | IS66 family transposase ISAeh1 | Transposase |
| C4901_RS11150 () | 2220710..2221735 | + | 1026 | WP_110137392.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C4901_RS11155 () | 2221899..2222408 | - | 510 | WP_110137393.1 | hypothetical protein | - |
| C4901_RS18100 () | 2222405..2222953 | - | 549 | WP_205735958.1 | hypothetical protein | - |
| C4901_RS18105 () | 2222991..2223173 | - | 183 | WP_205735959.1 | N-6 DNA methylase | - |
| C4901_RS18110 () | 2223170..2224207 | - | 1038 | WP_205735960.1 | N-6 DNA methylase | - |
| C4901_RS17735 () | 2224216..2224836 | - | 621 | WP_168185691.1 | hypothetical protein | - |
| C4901_RS17740 () | 2224872..2225558 | - | 687 | WP_168185692.1 | hypothetical protein | - |
| C4901_RS17745 () | 2225805..2226941 | - | 1137 | WP_168185693.1 | hypothetical protein | - |
| C4901_RS11170 () | 2227346..2228743 | - | 1398 | WP_205735961.1 | AAA family ATPase | - |
| C4901_RS11175 () | 2228757..2229098 | - | 342 | WP_110137395.1 | hypothetical protein | - |
| C4901_RS11185 () | 2229533..2230144 | - | 612 | WP_110137397.1 | hypothetical protein | - |
| C4901_RS11190 () | 2230939..2231625 | - | 687 | WP_145960704.1 | hypothetical protein | - |
| C4901_RS11195 () | 2231724..2232119 | - | 396 | WP_145960705.1 | hypothetical protein | - |
| C4901_RS11200 () | 2232445..2232783 | - | 339 | WP_110137400.1 | cupin domain-containing protein | - |
| C4901_RS11205 () | 2233171..2234691 | + | 1521 | Protein_2203 | IS3 family transposase ISSde10 | Transposase |
| C4901_RS11210 () | 2234838..2235056 | - | 219 | WP_110137401.1 | hypothetical protein | - |
| C4901_RS18115 () | 2235244..2235417 | - | 174 | WP_205735962.1 | hypothetical protein | - |
| C4901_RS18120 () | 2235502..2235945 | - | 444 | WP_205735963.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| C4901_RS11225 () | 2236027..2236467 | - | 441 | WP_168185694.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| C4901_RS11235 () | 2236735..2236959 | - | 225 | WP_110137402.1 | addiction module protein | - |
| C4901_RS11245 () | 2238132..2238425 | - | 294 | WP_110137404.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C4901_RS11250 () | 2238415..2238660 | - | 246 | WP_110137405.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| C4901_RS11255 () | 2239431..2240456 | + | 1026 | WP_110137392.1 | site-specific integrase | - |
| C4901_RS11265 () | 2241512..2242243 | + | 732 | WP_110137408.1 | NYN domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|