MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 30719 bp
Accession: NZ_CP027635 Location: 1..30719 Organism: Campylobacter coli strain meC0281 Replicon: plasmid unnamed1
Accession: NZ_CP027635 Location: 1..30719 Organism: Campylobacter coli strain meC0281 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSM104626_RS09160 () | 86..544 | + | 459 | WP_200408903.1 | GNAT family N-acetyltransferase | - |
| DSM104626_RS09165 () | 557..887 | + | 331 | Protein_1 | hypothetical protein | - |
| DSM104626_RS09170 () | 1555..2400 | + | 846 | WP_002829122.1 | hypothetical protein | - |
| DSM104626_RS09175 () | 2397..2810 | + | 414 | WP_002829124.1 | type II toxin-antitoxin system VapC family toxin | - |
| DSM104626_RS09180 () | 2823..3485 | + | 663 | WP_002784932.1 | site-specific DNA-methyltransferase | - |
| DSM104626_RS09185 () | 3478..4176 | + | 699 | WP_200408904.1 | restriction endonuclease | - |
| DSM104626_RS09190 () | 4649..5587 | + | 939 | WP_200408905.1 | Type IV secretion system protein PtlH | VF |
| DSM104626_RS09195 () | 5597..5893 | + | 297 | WP_002784998.1 | TrbC/VirB2 family protein | - |
| DSM104626_RS09200 () | 5893..6180 | + | 288 | WP_002779817.1 | VirB3 family type IV secretion system protein | - |
| DSM104626_RS09205 () | 6184..8649 | + | 2466 | WP_200408906.1 | conjugal transfer protein TrbE | - |
| DSM104626_RS09210 () | 8880..9512 | + | 633 | WP_045243733.1 | TrbM protein | - |
| DSM104626_RS09215 () | 9524..9970 | + | 447 | Protein_11 | Rha family transcriptional regulator | - |
| DSM104626_RS09220 () | 9988..10530 | + | 543 | WP_200408909.1 | phage regulatory protein | - |
| DSM104626_RS09225 () | 11118..11906 | + | 789 | WP_002846333.1 | P-type conjugative transfer protein TrbJ | - |
| DSM104626_RS09230 () | 11955..12218 | + | 264 | WP_002779810.1 | EexN family lipoprotein | - |
| DSM104626_RS09235 () | 12205..13392 | + | 1188 | WP_200408907.1 | P-type conjugative transfer protein TrbL | - |
| DSM104626_RS09240 () | 13722..14417 | + | 696 | WP_200408908.1 | conjugal transfer protein TrbF | - |
| DSM104626_RS09245 () | 14428..15582 | + | 1155 | WP_002841939.1 | P-type conjugative transfer protein TrbG | - |
| DSM104626_RS09250 () | 15579..16022 | + | 444 | WP_002779806.1 | hypothetical protein | - |
| DSM104626_RS09255 () | 16026..17267 | + | 1242 | WP_002784849.1 | Type IV secretion system protein virB10 | VF |
| DSM104626_RS09260 () | 17260..17805 | + | 546 | WP_200408899.1 | lytic transglycosylase domain-containing protein | - |
| DSM104626_RS09265 () | 17902..18264 | + | 363 | WP_002779803.1 | single-stranded DNA-binding protein | - |
| DSM104626_RS09270 () | 18251..18391 | + | 141 | WP_002779802.1 | hypothetical protein | - |
| DSM104626_RS09275 () | 18396..20609 | + | 2214 | WP_200408900.1 | DUF1738 domain-containing protein | - |
| DSM104626_RS09280 () | 20606..22429 | + | 1824 | WP_200408901.1 | Conjugal transfer protein TraG | VF |
| DSM104626_RS09285 () | 22440..23159 | + | 720 | WP_002844665.1 | conjugal transfer protein TraL | - |
| DSM104626_RS09290 () | 23262..23504 | + | 243 | WP_057098774.1 | hypothetical protein | Antitoxin Detail |
| DSM104626_RS09295 () | 23497..24180 | + | 684 | WP_072240469.1 | Fic family protein | Toxin Detail |
| DSM104626_RS09300 () | 24185..24652 | + | 468 | WP_002814358.1 | hypothetical protein | VF |
| DSM104626_RS09305 () | 24717..25112 | + | 396 | WP_200408902.1 | conjugal transfer protein TraM | - |
| DSM104626_RS09310 () | 25204..25890 | + | 687 | WP_002823899.1 | Protein virC1 | VF |
| DSM104626_RS09315 () | 25893..26117 | + | 225 | WP_002846381.1 | hypothetical protein | - |
| DSM104626_RS09320 () | 26259..26732 | + | 474 | WP_002817206.1 | IS200-IS605 family transposase ISCco1 | Transposase |
| DSM104626_RS09325 () | 26719..27957 | + | 1239 | WP_002784330.1 | IS200-IS605 family transposase ISCco1 | Transposase |
| DSM104626_RS09330 () | 28099..30255 | - | 2157 | WP_002839866.1 | Protein TraI | Relaxase |
| DSM104626_RS09335 () | 30218..30601 | - | 384 | WP_002823902.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|