MGE detailed information
MGE type: Prophage MGE length: 68860 bp
Accession: NZ_CP027599 Location: 2821943..2890802 Organism: Escherichia coli strain 97-3250 Replicon: chromosome
Accession: NZ_CP027599 Location: 2821943..2890802 Organism: Escherichia coli strain 97-3250 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7A06_RS15305 () | 2817842..2819062 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| C7A06_RS15310 () | 2819187..2819882 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| C7A06_RS15315 () | 2819835..2821127 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C7A06_RS15320 () | 2821286..2821900 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C7A06_RS15325 () | 2821943..2822797 | - | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C7A06_RS15330 () | 2822799..2823416 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C7A06_RS15335 () | 2823427..2825850 | - | 2424 | WP_001342196.1 | dimethyl sulfoxide reductase subunit A | - |
| C7A06_RS15340 () | 2825911..2828336 | - | 2426 | Protein_2841 | dimethyl sulfoxide reductase subunit A | - |
| C7A06_RS15345 () | 2828535..2828840 | - | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| C7A06_RS15350 () | 2828948..2829658 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| C7A06_RS15355 () | 2829661..2830221 | - | 561 | WP_001138576.1 | spermidine N1-acetyltransferase | - |
| C7A06_RS15360 () | 2830256..2830597 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| C7A06_RS15365 () | 2830732..2831058 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| C7A06_RS15375 () | 2831264..2832478 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| C7A06_RS15380 () | 2832490..2833509 | + | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| C7A06_RS15390 () | 2833697..2834977 | - | 1281 | WP_000877011.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C7A06_RS15395 () | 2835012..2835242 | - | 231 | Protein_2850 | excisionase family protein | - |
| C7A06_RS15400 () | 2835232..2835909 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| C7A06_RS15405 () | 2835909..2836256 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| C7A06_RS15410 () | 2836276..2837847 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| C7A06_RS15415 () | 2837878..2837970 | - | 93 | Protein_2854 | excisionase family protein | - |
| C7A06_RS15420 () | 2838043..2840514 | - | 2472 | WP_000048369.1 | exonuclease | - |
| C7A06_RS15425 () | 2840608..2840799 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| C7A06_RS15430 () | 2840796..2840984 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| C7A06_RS15435 () | 2841471..2842046 | - | 576 | WP_000347171.1 | hypothetical protein | - |
| C7A06_RS15440 () | 2842048..2842203 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| C7A06_RS15445 () | 2842396..2842803 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| C7A06_RS15450 () | 2842881..2843108 | + | 228 | WP_000476993.1 | transcriptional regulator | - |
| C7A06_RS15455 () | 2843092..2843613 | + | 522 | WP_000705349.1 | hypothetical protein | - |
| C7A06_RS15460 () | 2843594..2844559 | + | 966 | WP_000054507.1 | hypothetical protein | - |
| C7A06_RS15465 () | 2844600..2845019 | + | 420 | WP_001151195.1 | DUF977 family protein | - |
| C7A06_RS15470 () | 2845053..2846393 | + | 1341 | WP_000589012.1 | ISNCY family transposase ISCARN112 | Transposase |
| C7A06_RS15475 () | 2846830..2847162 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| C7A06_RS15480 () | 2847365..2847670 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| C7A06_RS15485 () | 2847695..2847934 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C7A06_RS15490 () | 2847934..2848221 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C7A06_RS15495 () | 2848294..2848449 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C7A06_RS15505 () | 2848617..2848889 | + | 273 | WP_012817871.1 | hypothetical protein | - |
| C7A06_RS15510 () | 2848891..2849946 | + | 1056 | WP_001369253.1 | DUF968 domain-containing protein | - |
| C7A06_RS15515 () | 2849947..2850312 | + | 366 | WP_000140024.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C7A06_RS15520 () | 2850321..2850863 | + | 543 | WP_000640017.1 | DUF1133 family protein | - |
| C7A06_RS15525 () | 2851095..2851292 | + | 198 | WP_000917767.1 | hypothetical protein | - |
| C7A06_RS15530 () | 2851443..2852492 | + | 1050 | WP_000611215.1 | site-specific DNA-methyltransferase | - |
| C7A06_RS15555 () | 2853291..2853422 | + | 132 | WP_001340026.1 | DUF3927 family protein | - |
| C7A06_RS15560 () | 2853703..2854038 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| C7A06_RS15565 () | 2854298..2856151 | + | 1854 | WP_069358388.1 | SASA family carbohydrate esterase | - |
| C7A06_RS15570 () | 2856301..2856516 | + | 216 | WP_000284518.1 | class II holin family protein | - |
| C7A06_RS15575 () | 2856521..2856865 | + | 345 | WP_021569237.1 | YdfR family protein | - |
| C7A06_RS15580 () | 2856916..2857449 | + | 534 | WP_000992033.1 | lysozyme | - |
| C7A06_RS15590 () | 2858004..2858090 | + | 87 | WP_032140280.1 | hypothetical protein | - |
| C7A06_RS34105 () | 2858312..2858497 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C7A06_RS15605 () | 2858898..2859224 | + | 327 | WP_000828072.1 | TonB family protein | - |
| C7A06_RS15610 () | 2859356..2859556 | - | 201 | WP_000095732.1 | DUF3950 domain-containing protein | - |
| C7A06_RS15615 () | 2859598..2859963 | + | 366 | WP_000279801.1 | HNH endonuclease | - |
| C7A06_RS15625 () | 2860255..2860818 | + | 564 | WP_044162959.1 | terminase small subunit | - |
| C7A06_RS15630 () | 2860815..2862476 | + | 1662 | WP_033800465.1 | terminase large subunit | - |
| C7A06_RS15635 () | 2862540..2864318 | + | 1779 | WP_062854036.1 | phage major capsid protein | - |
| C7A06_RS15640 () | 2864363..2864584 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C7A06_RS15645 () | 2864530..2867109 | + | 2580 | WP_000267296.1 | phage portal protein | - |
| C7A06_RS15650 () | 2867112..2867438 | + | 327 | WP_000125990.1 | head-tail connector protein | - |
| C7A06_RS15655 () | 2867448..2867798 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| C7A06_RS15660 () | 2867795..2868241 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C7A06_RS15665 () | 2868238..2868582 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C7A06_RS15670 () | 2868649..2869365 | + | 717 | WP_001275441.1 | immunoglobulin domain-containing protein | - |
| C7A06_RS15675 () | 2869380..2869754 | + | 375 | WP_000710949.1 | phage tail assembly chaperone | - |
| C7A06_RS15680 () | 2869850..2870059 | + | 210 | WP_001513217.1 | DUF4035 domain-containing protein | - |
| C7A06_RS15685 () | 2870107..2873349 | + | 3243 | WP_000212980.1 | phage tail tape measure protein | - |
| C7A06_RS15690 () | 2873342..2873683 | + | 342 | WP_000807940.1 | phage tail protein | - |
| C7A06_RS15695 () | 2873683..2874381 | + | 699 | WP_001335877.1 | phage minor tail protein L | - |
| C7A06_RS15700 () | 2874392..2875135 | + | 744 | WP_000194723.1 | C40 family peptidase | - |
| C7A06_RS15705 () | 2875081..2875713 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C7A06_RS15710 () | 2876056..2878500 | + | 2445 | Protein_2905 | host specificity protein J | - |
| C7A06_RS15715 () | 2878584..2878988 | + | 405 | WP_000839170.1 | IS66 family transposase ISEc22 | Transposase |
| C7A06_RS15720 () | 2878985..2879332 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C7A06_RS15725 () | 2879381..2880919 | + | 1539 | WP_000099160.1 | IS66 family transposase ISEc22 | Transposase |
| C7A06_RS15730 () | 2880942..2881991 | + | 1050 | WP_000902073.1 | DUF1983 domain-containing protein | - |
| C7A06_RS15735 () | 2882059..2882658 | + | 600 | WP_001228278.1 | Outer membrane protein X | VF |
| C7A06_RS15740 () | 2882810..2884123 | + | 1314 | WP_106904145.1 | ISNCY family transposase KIS | Transposase |
| C7A06_RS15745 () | 2884156..2885727 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| C7A06_RS15750 () | 2885747..2886094 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| C7A06_RS15755 () | 2886094..2886771 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| C7A06_RS15760 () | 2886832..2887101 | + | 270 | WP_001023357.1 | phage tail fiber C-terminal domain-containing protein | - |
| C7A06_RS15765 () | 2887214..2887788 | + | 575 | Protein_2916 | hypothetical protein | VF |
| C7A06_RS15770 () | 2888127..2889451 | - | 1325 | Protein_2917 | hypothetical protein | VF |
| C7A06_RS15780 () | 2890110..2891024 | - | 915 | Protein_2918 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C7A06_RS15785 () | 2891047..2891169 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| C7A06_RS15790 () | 2891276..2892187 | + | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| C7A06_RS15795 () | 2892253..2892822 | + | 570 | WP_000938103.1 | T3SS effector caspase inhibitor NleF | - |
| C7A06_RS15800 () | 2892869..2893503 | - | 635 | Protein_2922 | transposase | - |
| C7A06_RS15805 () | 2893990..2894268 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C7A06_RS15810 () | 2894696..2894842 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C7A06_RS15815 () | 2894979..2895626 | - | 648 | WP_001303944.1 | T3SS effector E3 ubiquitin-protein ligase NleG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|