MGE detailed information
MGE type: Prophage MGE length: 64991 bp
Accession: NZ_CP027586 Location: 85551..150541 Organism: Escherichia coli strain 2012EL-2448 Replicon: chromosome
Accession: NZ_CP027586 Location: 85551..150541 Organism: Escherichia coli strain 2012EL-2448 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7A04_RS00495 () | 80679..81683 | + | 1005 | WP_000740061.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C7A04_RS00500 () | 81684..82319 | + | 636 | WP_001240105.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C7A04_RS00505 () | 82576..83226 | + | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| C7A04_RS00510 () | 83569..84088 | + | 520 | Protein_92 | cytochrome b | - |
| C7A04_RS00520 () | 84928..85260 | + | 333 | Protein_93 | YkgJ family cysteine cluster protein | - |
| C7A04_RS00525 () | 85551..86024 | - | 474 | WP_024175323.1 | hypothetical protein | - |
| C7A04_RS00530 () | 86112..87383 | - | 1272 | WP_033883542.1 | YadA-like family protein | - |
| C7A04_RS00535 () | 87876..88541 | - | 666 | WP_033883544.1 | DUF4376 domain-containing protein | - |
| C7A04_RS00540 () | 88605..90341 | - | 1737 | WP_106913339.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C7A04_RS00545 () | 90484..90624 | - | 141 | WP_000078852.1 | Hok/Gef family protein | - |
| C7A04_RS00550 () | 90823..94290 | - | 3468 | WP_106913340.1 | host specificity protein J | - |
| C7A04_RS00555 () | 94531..95163 | - | 633 | WP_077632782.1 | tail assembly protein | - |
| C7A04_RS00560 () | 95109..95852 | - | 744 | WP_106913341.1 | C40 family peptidase | - |
| C7A04_RS00565 () | 95863..96561 | - | 699 | WP_033883549.1 | phage minor tail protein L | - |
| C7A04_RS00570 () | 96561..96902 | - | 342 | WP_000343411.1 | phage tail protein | - |
| C7A04_RS00575 () | 96895..100137 | - | 3243 | WP_106913342.1 | phage tail tape measure protein | - |
| C7A04_RS00580 () | 100201..100614 | - | 414 | WP_033883554.1 | hypothetical protein | - |
| C7A04_RS00585 () | 100678..100887 | - | 210 | WP_136752569.1 | DUF4035 domain-containing protein | - |
| C7A04_RS00590 () | 100983..101357 | - | 375 | WP_000710934.1 | phage tail assembly chaperone | - |
| C7A04_RS00595 () | 101372..102088 | - | 717 | WP_062863664.1 | immunoglobulin domain-containing protein | - |
| C7A04_RS00600 () | 102154..102498 | - | 345 | WP_000133378.1 | DUF3168 domain-containing protein | - |
| C7A04_RS00605 () | 102495..102941 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C7A04_RS00610 () | 102938..103288 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| C7A04_RS00615 () | 103298..103624 | - | 327 | WP_028131506.1 | head-tail connector protein | - |
| C7A04_RS00620 () | 103621..106205 | - | 2585 | Protein_113 | phage portal protein | - |
| C7A04_RS00625 () | 106151..106372 | - | 222 | WP_001063099.1 | hypothetical protein | - |
| C7A04_RS00630 () | 106417..108354 | - | 1938 | WP_000173022.1 | phage major capsid protein | - |
| C7A04_RS00635 () | 108418..110079 | - | 1662 | WP_106913343.1 | terminase large subunit | - |
| C7A04_RS00640 () | 110076..110639 | - | 564 | WP_000958387.1 | terminase small subunit | - |
| C7A04_RS00645 () | 110929..111294 | - | 366 | WP_032331514.1 | HNH endonuclease | - |
| C7A04_RS00650 () | 111336..111536 | + | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| C7A04_RS00655 () | 111668..111994 | - | 327 | WP_000828070.1 | TonB family protein | - |
| C7A04_RS00670 () | 112339..112563 | - | 225 | WP_000735659.1 | hypothetical protein | - |
| C7A04_RS28065 () | 112649..112834 | - | 186 | WP_071852370.1 | Rz1 family lipoprotein | - |
| C7A04_RS00680 () | 113051..113986 | - | 936 | WP_000650395.1 | site-specific DNA-methyltransferase | - |
| C7A04_RS28075 () | 113994..114125 | - | 132 | WP_001280925.1 | hypothetical protein | - |
| C7A04_RS28440 () | 114140..114324 | - | 185 | Protein_125 | hypothetical protein | - |
| C7A04_RS00695 () | 114481..115014 | - | 534 | WP_001092902.1 | lysozyme | - |
| C7A04_RS00700 () | 115051..115608 | - | 558 | WP_042969680.1 | hypothetical protein | - |
| C7A04_RS00705 () | 115612..115827 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| C7A04_RS00710 () | 115904..116149 | - | 246 | WP_064562823.1 | DUF826 domain-containing protein | - |
| C7A04_RS00715 () | 116175..116357 | - | 183 | WP_001379752.1 | DUF1378 family protein | - |
| C7A04_RS00720 () | 116508..118475 | - | 1968 | WP_044860938.1 | SASA family carbohydrate esterase | - |
| C7A04_RS00725 () | 118998..119261 | - | 264 | WP_000719322.1 | Shiga toxin Stx2b subunit B | - |
| C7A04_RS00730 () | 119274..120233 | - | 960 | WP_001379755.1 | Shiga toxin Stx2 subunit A | - |
| C7A04_RS00750 () | 120617..121675 | - | 1059 | WP_000024334.1 | site-specific DNA-methyltransferase | - |
| C7A04_RS00755 () | 121826..122023 | - | 198 | WP_000917768.1 | hypothetical protein | - |
| C7A04_RS00760 () | 122250..123071 | - | 822 | WP_106913344.1 | antitermination protein | - |
| C7A04_RS00765 () | 123068..123448 | - | 381 | WP_000140006.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C7A04_RS00770 () | 123449..124507 | - | 1059 | WP_033883573.1 | DUF968 domain-containing protein | - |
| C7A04_RS00775 () | 124509..124787 | - | 279 | WP_024175311.1 | hypothetical protein | - |
| C7A04_RS00780 () | 124923..125180 | + | 258 | WP_001260978.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| C7A04_RS00785 () | 125186..125485 | + | 300 | WP_000220597.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C7A04_RS00790 () | 125688..126218 | - | 531 | WP_000104478.1 | DUF551 domain-containing protein | - |
| C7A04_RS00795 () | 126215..126892 | - | 678 | WP_000034205.1 | ead/Ea22-like family protein | - |
| C7A04_RS00800 () | 126889..127452 | - | 564 | WP_001226810.1 | ead/Ea22-like family protein | - |
| C7A04_RS00805 () | 127439..127744 | - | 306 | WP_032298829.1 | DUF4406 domain-containing protein | - |
| C7A04_RS00810 () | 127741..128022 | - | 282 | WP_072094476.1 | DNA-binding protein | - |
| C7A04_RS00815 () | 128055..128816 | - | 762 | WP_000450654.1 | DUF1627 domain-containing protein | - |
| C7A04_RS00820 () | 128850..129392 | - | 543 | WP_074015090.1 | replication protein | - |
| C7A04_RS28080 () | 129304..130341 | - | 1038 | WP_042969574.1 | phage replisome organiser | - |
| C7A04_RS00830 () | 130410..130835 | - | 426 | WP_000693925.1 | Rha family transcriptional regulator | - |
| C7A04_RS00835 () | 130819..131091 | - | 273 | WP_000887454.1 | helix-turn-helix domain-containing protein | - |
| C7A04_RS00840 () | 131200..131601 | + | 402 | WP_000986593.1 | helix-turn-helix domain-containing protein | - |
| C7A04_RS00845 () | 131629..131820 | + | 192 | WP_000100897.1 | hypothetical protein | Antitoxin Detail |
| C7A04_RS00850 () | 131820..132107 | + | 288 | WP_032351442.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C7A04_RS00855 () | 132381..132533 | + | 153 | WP_000380312.1 | DUF1391 family protein | - |
| C7A04_RS00870 () | 133029..133883 | + | 855 | WP_000935583.1 | Rha family phage regulatory protein | - |
| C7A04_RS00875 () | 133894..134082 | + | 189 | WP_000449173.1 | cell division inhibitor | - |
| C7A04_RS00880 () | 134079..134267 | + | 189 | WP_000199478.1 | DUF1482 family protein | - |
| C7A04_RS00885 () | 134360..136804 | + | 2445 | WP_106913345.1 | exonuclease | - |
| C7A04_RS00890 () | 136863..137066 | + | 204 | WP_000096347.1 | DUF4224 domain-containing protein | - |
| C7A04_RS00895 () | 137066..138091 | + | 1026 | WP_000533611.1 | tyrosine-type recombinase/integrase | - |
| C7A04_RS00905 () | 138327..139124 | + | 798 | WP_001300307.1 | DgsA anti-repressor MtfA | - |
| C7A04_RS00915 () | 139613..147596 | + | 7984 | Protein_163 | Ig-like domain-containing protein | - |
| C7A04_RS00920 () | 147858..148910 | - | 1053 | WP_000477884.1 | glycosyltransferase family 9 protein | - |
| C7A04_RS00925 () | 149225..150541 | + | 1317 | WP_000378561.1 | shikimate transporter | - |
| C7A04_RS00930 () | 150643..152097 | + | 1455 | WP_001060242.1 | AMP nucleosidase | - |
| C7A04_RS00935 () | 152440..153156 | + | 717 | WP_000532912.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| C7A04_RS00950 () | 153784..155427 | - | 1644 | WP_122986595.1 | toxic metabolite efflux MATE transporter YeeO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|