MGE detailed information
MGE type: Conjugative plasmid MGE length: 160576 bp
Accession: NZ_CP027585 Location: 1..160576 Organism: Escherichia coli strain 00-3076 Replicon: plasmid unnamed
Accession: NZ_CP027585 Location: 1..160576 Organism: Escherichia coli strain 00-3076 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7A02_RS26045 () | 1304..1741 | - | 438 | WP_000539684.1 | type IV pilus biogenesis protein PilM | - |
| C7A02_RS26050 () | 1746..2816 | - | 1071 | WP_001170190.1 | hypothetical protein | VF |
| C7A02_RS26060 () | 3425..3742 | - | 318 | WP_001373093.1 | PilI type IV pilus biogenesis protein | - |
| C7A02_RS26065 () | 3748..5442 | - | 1695 | WP_000482662.1 | flotillin family protein | - |
| C7A02_RS26070 () | 5469..6089 | - | 621 | WP_000176499.1 | DUF1449 family protein | - |
| C7A02_RS26080 () | 6356..7021 | - | 666 | WP_000154144.1 | hypothetical protein | - |
| C7A02_RS26085 () | 7162..7803 | - | 642 | WP_000335846.1 | transcription termination factor NusG | - |
| C7A02_RS26100 () | 8505..9536 | + | 1032 | WP_000907876.1 | hypothetical protein | - |
| C7A02_RS27435 () | 10233..10493 | + | 261 | WP_072094435.1 | hypothetical protein | - |
| C7A02_RS26120 () | 10506..10745 | + | 240 | WP_011310132.1 | MarR family transcriptional regulator | - |
| C7A02_RS26125 () | 11198..18664 | + | 7467 | Protein_11 | tRNA nuclease CdiA | VF |
| C7A02_RS26130 () | 19284..19472 | + | 189 | WP_169301900.1 | hypothetical protein | - |
| C7A02_RS26135 () | 19971..20390 | + | 420 | WP_011310111.1 | IS66 family transposase ISEc23 | Transposase |
| C7A02_RS26140 () | 20387..20737 | + | 351 | WP_000624657.1 | IS66 family transposase IS682 | Transposase |
| C7A02_RS26145 () | 20768..22360 | + | 1593 | WP_000080208.1 | IS66 family transposase ISEc47 | Transposase |
| C7A02_RS26150 () | 22398..22595 | + | 198 | Protein_16 | IS66 family transposase IS682 | Transposase |
| C7A02_RS26155 () | 22649..23692 | + | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| C7A02_RS26160 () | 23709..24134 | + | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| C7A02_RS26170 () | 24418..24606 | - | 189 | Protein_19 | IS66 family transposase ISEc47 | Transposase |
| C7A02_RS26175 () | 24668..24850 | + | 183 | Protein_20 | IS110 family transposase | - |
| C7A02_RS26180 () | 25185..25607 | + | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| C7A02_RS26185 () | 25868..27955 | - | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| C7A02_RS26195 () | 28263..29380 | - | 1118 | Protein_23 | IS3 family transposase | - |
| C7A02_RS26200 () | 29577..30959 | - | 1383 | WP_064506697.1 | Adhesin YadA | VF |
| C7A02_RS27440 () | 31213..31302 | + | 90 | Protein_25 | transposase | - |
| C7A02_RS26205 () | 31369..32531 | + | 1163 | Protein_26 | IS3 family transposase | - |
| C7A02_RS26210 () | 32589..32909 | + | 321 | WP_000220092.1 | hypothetical protein | - |
| C7A02_RS26225 () | 33399..34076 | - | 678 | WP_044527425.1 | hypothetical protein | - |
| C7A02_RS26230 () | 34235..34621 | + | 387 | WP_000598953.1 | thermonuclease family protein | - |
| C7A02_RS26235 () | 35118..39020 | + | 3903 | WP_047091594.1 | Serine protease EspP | VF |
| C7A02_RS26240 () | 39183..39392 | - | 210 | WP_062896385.1 | hypothetical protein | - |
| C7A02_RS26250 () | 39526..39891 | + | 366 | WP_000997727.1 | hypothetical protein | - |
| C7A02_RS26255 () | 39901..40092 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| C7A02_RS26260 () | 40120..40431 | + | 312 | WP_000203485.1 | hypothetical protein | - |
| C7A02_RS26265 () | 40547..41011 | + | 465 | WP_077629759.1 | IS3 family transposase ISKpn8 | Transposase |
| C7A02_RS26270 () | 41079..41315 | + | 237 | WP_001369996.1 | hypothetical protein | - |
| C7A02_RS26275 () | 41356..42054 | - | 699 | WP_000431492.1 | lactate utilization protein C | - |
| C7A02_RS26280 () | 42059..43474 | - | 1416 | WP_000054160.1 | iron-sulfur cluster-binding protein | - |
| C7A02_RS26285 () | 43485..44204 | - | 720 | WP_001102092.1 | (Fe-S)-binding protein | - |
| C7A02_RS26290 () | 44255..45811 | - | 1557 | WP_000554412.1 | L-lactate permease | - |
| C7A02_RS26295 () | 46176..46524 | - | 349 | Protein_41 | integrase core domain-containing protein | - |
| C7A02_RS26300 () | 46544..47173 | - | 630 | Protein_42 | transposase | - |
| C7A02_RS26305 () | 47278..48803 | - | 1526 | Protein_43 | IS3 family transposase | - |
| C7A02_RS26310 () | 48890..49324 | - | 435 | Protein_44 | IS110 family transposase ISEc21 | Transposase |
| C7A02_RS26320 () | 49654..50201 | - | 548 | Protein_45 | transposase | - |
| C7A02_RS26335 () | 50808..51092 | + | 285 | WP_000439678.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C7A02_RS26340 () | 51313..55620 | + | 4308 | WP_024177480.1 | Autotransporter adhesin SadA | VF |
| C7A02_RS26345 () | 55645..56448 | + | 804 | WP_000899428.1 | Outer membrane protein A | VF |
| C7A02_RS26355 () | 56876..57391 | + | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| C7A02_RS26360 () | 57393..60389 | + | 2997 | WP_000217748.1 | Hemolysin, chromosomal | VF |
| C7A02_RS26365 () | 60439..62559 | + | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C7A02_RS26370 () | 62563..64002 | + | 1440 | WP_001213534.1 | Hemolysin secretion protein D, chromosomal | VF |
| C7A02_RS26375 () | 64123..64617 | + | 495 | WP_000377257.1 | Transcriptional repressor MprA | VF |
| C7A02_RS26385 () | 64747..64977 | + | 231 | WP_032279745.1 | hypothetical protein | - |
| C7A02_RS26390 () | 65134..65416 | + | 283 | Protein_55 | ISL3 family transposase ISEc53 | Transposase |
| C7A02_RS26395 () | 65655..66632 | - | 978 | WP_001369978.1 | RepB family plasmid replication initiator protein | - |
| C7A02_RS27445 () | 67201..67412 | + | 212 | Protein_57 | hypothetical protein | - |
| C7A02_RS27450 () | 67416..67526 | + | 111 | Protein_58 | IS481 family transposase | - |
| C7A02_RS26415 () | 67803..68534 | + | 732 | WP_000850413.1 | complement resistance protein TraT | - |
| C7A02_RS26420 () | 68629..68964 | + | 336 | Protein_60 | colicin | - |
| C7A02_RS26430 () | 69434..69781 | + | 348 | WP_000142426.1 | hypothetical protein | - |
| C7A02_RS26435 () | 69799..70389 | - | 591 | WP_000194569.1 | hypothetical protein | - |
| C7A02_RS26440 () | 70386..70646 | - | 261 | WP_000343100.1 | hypothetical protein | - |
| C7A02_RS26445 () | 71242..71460 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C7A02_RS26450 () | 71462..71767 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C7A02_RS26455 () | 71768..72574 | + | 807 | WP_000016966.1 | site-specific integrase | - |
| C7A02_RS26460 () | 72754..73398 | + | 645 | WP_001144036.1 | ParA family protein | - |
| C7A02_RS26465 () | 73485..73793 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| C7A02_RS26470 () | 74208..75188 | + | 981 | WP_000688508.1 | plasmid segregation protein ParM | - |
| C7A02_RS26475 () | 75181..75597 | + | 417 | WP_001278809.1 | plasmid partitioning/stability family protein | - |
| C7A02_RS26480 () | 75599..75772 | - | 174 | Protein_71 | DUF4113 domain-containing protein | - |
| C7A02_RS26485 () | 75802..77394 | - | 1593 | WP_001370065.1 | IS66 family transposase ISEc47 | Transposase |
| C7A02_RS26490 () | 77425..77775 | - | 351 | WP_000624657.1 | IS66 family transposase IS682 | Transposase |
| C7A02_RS26495 () | 77772..78191 | - | 420 | WP_011310111.1 | IS66 family transposase ISEc23 | Transposase |
| C7A02_RS26505 () | 78696..79487 | - | 792 | WP_000977390.1 | DUF4198 domain-containing protein | - |
| C7A02_RS26510 () | 79506..81479 | - | 1974 | WP_024177478.1 | Hemin receptor | VF |
| C7A02_RS26520 () | 81976..82185 | + | 210 | Protein_77 | IS21 family transposase IS21 | Transposase |
| C7A02_RS26525 () | 82208..82873 | + | 666 | WP_000448923.1 | hypothetical protein | - |
| C7A02_RS26530 () | 83152..85032 | + | 1881 | WP_001283355.1 | colicin | - |
| C7A02_RS26535 () | 85050..85397 | - | 348 | WP_000762580.1 | hypothetical protein | - |
| C7A02_RS26540 () | 85516..85863 | + | 348 | WP_000142449.1 | hypothetical protein | - |
| C7A02_RS26545 () | 85883..86473 | - | 591 | WP_000194580.1 | hypothetical protein | - |
| C7A02_RS27455 () | 86473..86724 | - | 252 | WP_031322317.1 | hypothetical protein | - |
| C7A02_RS27460 () | 87121..87423 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| C7A02_RS26565 () | 87420..88046 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| C7A02_RS26575 () | 88250..89520 | - | 1271 | Protein_86 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C7A02_RS26580 () | 89520..89957 | - | 438 | WP_000109074.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C7A02_RS26585 () | 89954..90202 | - | 249 | WP_000618108.1 | DinI-like family protein | - |
| C7A02_RS26595 () | 90621..91523 | + | 903 | WP_077629773.1 | DUF1281 domain-containing protein | - |
| C7A02_RS26600 () | 91520..91832 | + | 313 | Protein_90 | hypothetical protein | - |
| C7A02_RS26605 () | 91909..92592 | + | 684 | WP_000086114.1 | DNA methylase | - |
| C7A02_RS26610 () | 92593..92814 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| C7A02_RS26615 () | 92828..93262 | + | 435 | WP_000274419.1 | DUF1380 family protein | - |
| C7A02_RS26620 () | 93307..93984 | + | 678 | Protein_94 | hypothetical protein | - |
| C7A02_RS26625 () | 94027..94560 | + | 534 | WP_001276132.1 | single-stranded DNA-binding protein | - |
| C7A02_RS26630 () | 94618..94851 | + | 234 | WP_000006027.1 | DUF905 domain-containing protein | - |
| C7A02_RS26635 () | 94911..96869 | + | 1959 | WP_000117306.1 | ParB/RepB/Spo0J family partition protein | - |
| C7A02_RS26640 () | 96924..97358 | + | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| C7A02_RS26645 () | 97355..98074 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C7A02_RS26650 () | 98071..98667 | + | 597 | WP_000978008.1 | hypothetical protein | - |
| C7A02_RS26660 () | 99132..99632 | + | 501 | WP_000117617.1 | antirestriction protein ArdA | - |
| C7A02_RS26670 () | 100365..100799 | + | 435 | WP_000218848.1 | hypothetical protein | - |
| C7A02_RS26675 () | 100892..101158 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| C7A02_RS26680 () | 101223..102149 | + | 927 | WP_000038346.1 | Recombination-promoting nuclease RpnA | VF |
| C7A02_RS26685 () | 102149..102382 | + | 234 | WP_001370006.1 | hypothetical protein | - |
| C7A02_RS26690 () | 102413..102664 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| C7A02_RS26705 () | 103243..103534 | + | 292 | Protein_107 | hypothetical protein | - |
| C7A02_RS26710 () | 103548..104090 | + | 543 | WP_106901650.1 | DUF4942 domain-containing protein | - |
| C7A02_RS26715 () | 104175..104510 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C7A02_RS26720 () | 104742..105074 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| C7A02_RS26725 () | 105086..107797 | + | 2712 | WP_000991390.1 | Protein TraI | Relaxase |
| C7A02_RS26730 () | 107865..108295 | + | 431 | Protein_112 | tolA family protein | - |
| C7A02_RS26735 () | 108393..108695 | - | 303 | WP_000334995.1 | hypothetical protein | - |
| C7A02_RS26740 () | 108821..111124 | - | 2304 | WP_000077647.1 | TraM recognition domain-containing protein | - |
| C7A02_RS26745 () | 111105..112223 | - | 1119 | WP_000155605.1 | DsbC family protein | - |
| C7A02_RS26750 () | 112220..113491 | - | 1272 | WP_000121915.1 | IncI1-type conjugal transfer protein TrbA | - |
| C7A02_RS26765 () | 114274..114585 | - | 312 | WP_000203481.1 | hypothetical protein | - |
| C7A02_RS26770 () | 114613..114804 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| C7A02_RS26775 () | 114814..115179 | - | 366 | WP_000997722.1 | hypothetical protein | - |
| C7A02_RS26785 () | 115686..119765 | - | 4080 | WP_001034114.1 | Serine protease SepA autotransporter | VF |
| C7A02_RS26790 () | 120212..120625 | - | 414 | WP_000598952.1 | thermonuclease family protein | - |
| C7A02_RS26795 () | 120784..121407 | + | 624 | WP_001158018.1 | hypothetical protein | - |
| C7A02_RS26800 () | 121495..121950 | + | 456 | WP_001205143.1 | DUF2569 family protein | - |
| C7A02_RS26805 () | 122151..123686 | + | 1536 | WP_001373098.1 | phosphoethanolamine transferase | - |
| C7A02_RS26810 () | 123779..124021 | - | 243 | WP_001398505.1 | hypothetical protein | - |
| C7A02_RS26815 () | 124355..124507 | + | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| C7A02_RS26820 () | 124645..126231 | - | 1587 | WP_000004566.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| C7A02_RS26825 () | 126505..127155 | - | 651 | WP_001098359.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C7A02_RS26830 () | 127226..129391 | - | 2166 | WP_000691805.1 | DotA/TraY family protein | - |
| C7A02_RS26835 () | 129464..130033 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| C7A02_RS26840 () | 130030..131235 | - | 1206 | WP_001189539.1 | conjugal transfer protein TraW | - |
| C7A02_RS26845 () | 131196..131813 | - | 618 | WP_000286857.1 | hypothetical protein | - |
| C7A02_RS26850 () | 131813..134857 | - | 3045 | WP_001024761.1 | hypothetical protein | - |
| C7A02_RS26855 () | 135032..135412 | - | 381 | WP_000690886.1 | hypothetical protein | - |
| C7A02_RS26860 () | 135412..135771 | - | 360 | WP_000380399.1 | hypothetical protein | - |
| C7A02_RS26865 () | 135826..136644 | - | 819 | WP_072094468.1 | conjugal transfer protein TraT | - |
| C7A02_RS26870 () | 136559..136810 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| C7A02_RS26875 () | 136867..137265 | - | 399 | WP_000086066.1 | hypothetical protein | - |
| C7A02_RS26880 () | 137312..137839 | - | 528 | WP_011310083.1 | conjugal transfer protein TraQ | - |
| C7A02_RS26885 () | 137839..138552 | - | 714 | WP_000787005.1 | conjugal transfer protein TraP | - |
| C7A02_RS26890 () | 138549..139880 | - | 1332 | WP_001272010.1 | conjugal transfer protein TraO | - |
| C7A02_RS26895 () | 139884..140858 | - | 975 | WP_001165562.1 | hypothetical protein | VF |
| C7A02_RS26900 () | 140869..141563 | - | 695 | Protein_143 | hypothetical protein | VF |
| C7A02_RS26905 () | 141575..141925 | - | 351 | WP_001056369.1 | hypothetical protein | - |
| C7A02_RS26910 () | 141942..145958 | - | 4017 | WP_033811931.1 | DNA primase | - |
| C7A02_RS26915 () | 146022..146312 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| C7A02_RS26920 () | 146309..147457 | - | 1149 | WP_000625247.1 | putative protein YggR | VF |
| C7A02_RS26925 () | 147441..148277 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| C7A02_RS26930 () | 148274..148726 | - | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| C7A02_RS26935 () | 149085..150286 | - | 1202 | Protein_150 | conjugal transfer protein TraF | - |
| C7A02_RS26940 () | 150376..151197 | - | 822 | WP_000804094.1 | hypothetical protein | - |
| C7A02_RS26945 () | 151457..151777 | + | 321 | WP_000695056.1 | hypothetical protein | - |
| C7A02_RS26950 () | 151869..152159 | - | 291 | WP_000681897.1 | hypothetical protein | - |
| C7A02_RS26965 () | 152617..153981 | - | 1365 | WP_001168071.1 | hypothetical protein | VF |
| C7A02_RS26970 () | 153986..154621 | - | 636 | WP_000478595.1 | prepilin peptidase | - |
| C7A02_RS26975 () | 154640..155113 | - | 474 | WP_000870986.1 | hypothetical protein | VF |
| C7A02_RS26980 () | 155167..155703 | - | 537 | WP_001011156.1 | cleavage protein | - |
| C7A02_RS26985 () | 155777..156877 | - | 1101 | WP_000670139.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| C7A02_RS26990 () | 156879..158387 | - | 1509 | WP_000886636.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| C7A02_RS26995 () | 158472..158924 | - | 453 | WP_001112923.1 | type IV pilus biogenesis protein PilP | - |
| C7A02_RS27000 () | 158914..160209 | - | 1296 | WP_000129891.1 | type 4b pilus protein PilO2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|