MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88339 bp
Accession: NZ_CP027583 Location: 1..88339 Organism: Escherichia coli strain 2013C-4538 Replicon: plasmid unnamed
Accession: NZ_CP027583 Location: 1..88339 Organism: Escherichia coli strain 2013C-4538 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6999_RS31585 () | 1..311 | + | 311 | Protein_0 | Protein TraI | Relaxase |
| C6999_RS30695 () | 328..3048 | + | 2721 | Protein_1 | Protein TraI | Relaxase |
| C6999_RS30700 () | 3269..3589 | - | 321 | WP_001341409.1 | hypothetical protein | - |
| C6999_RS30705 () | 3628..4316 | + | 689 | Protein_3 | IS3 family transposase IS600 | Transposase |
| C6999_RS30710 () | 4357..5569 | - | 1213 | Protein_4 | IS3 family transposase IS629 | Transposase |
| C6999_RS30715 () | 5568..5981 | + | 414 | WP_136138333.1 | DUF1449 family protein | - |
| C6999_RS30720 () | 6029..6241 | - | 213 | Protein_6 | IS3 family transposase ISSfl10 | Transposase |
| C6999_RS30730 () | 6785..10687 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| C6999_RS30735 () | 11130..11303 | - | 174 | Protein_8 | IS66 family transposase | - |
| C6999_RS30740 () | 11365..11577 | + | 213 | Protein_9 | IS3 family transposase ISSfl10 | Transposase |
| C6999_RS30745 () | 11625..12044 | - | 420 | WP_158707430.1 | DUF1449 family protein | - |
| C6999_RS30750 () | 11975..12649 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6999_RS30755 () | 12646..12993 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6999_RS30760 () | 13013..14565 | + | 1553 | Protein_13 | IS66 family transposase ISSfl3 | Transposase |
| C6999_RS30765 () | 14844..16031 | - | 1188 | WP_106875464.1 | IS91 family transposase ISEc37 | Transposase |
| C6999_RS30770 () | 16031..16396 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| C6999_RS30780 () | 16633..16980 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C6999_RS30785 () | 17030..18568 | + | 1539 | WP_012917688.1 | IS66 family transposase ISEc8 | Transposase |
| C6999_RS30790 () | 18631..18819 | - | 189 | Protein_18 | hypothetical protein | - |
| C6999_RS30795 () | 18872..19870 | - | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C6999_RS30800 () | 19944..21665 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C6999_RS30805 () | 21759..22865 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C6999_RS30810 () | 22865..23686 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C6999_RS30820 () | 25159..25811 | + | 653 | Protein_23 | IS3 family transposase IS629 | Transposase |
| C6999_RS30830 () | 26334..26849 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C6999_RS30835 () | 26851..29847 | + | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| C6999_RS30840 () | 29897..32017 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6999_RS30845 () | 32021..33460 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6999_RS30850 () | 33527..33670 | + | 144 | Protein_28 | transcriptional regulator | - |
| C6999_RS30855 () | 33674..33865 | + | 192 | Protein_29 | lipid II-degrading bacteriocin | - |
| C6999_RS30860 () | 33873..34226 | - | 354 | WP_000864810.1 | colicin M immunity protein | - |
| C6999_RS30865 () | 34399..35181 | - | 783 | WP_032277352.1 | site-specific integrase | - |
| C6999_RS30870 () | 35183..35596 | - | 414 | WP_000465041.1 | hypothetical protein | - |
| C6999_RS30890 () | 36156..36386 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C6999_RS30895 () | 36383..36799 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C6999_RS30900 () | 36961..37506 | - | 546 | WP_001165114.1 | hypothetical protein | - |
| C6999_RS30905 () | 38264..39124 | - | 861 | WP_000704534.1 | putative protein YcjY | VF |
| C6999_RS30910 () | 39252..39638 | + | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| C6999_RS30915 () | 39692..40366 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6999_RS30920 () | 40363..40710 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6999_RS30925 () | 40730..42282 | + | 1553 | Protein_40 | IS66 family transposase ISSfl3 | Transposase |
| C6999_RS30930 () | 42316..42675 | - | 360 | Protein_41 | DUF1449 family protein | - |
| C6999_RS30940 () | 42942..43607 | - | 666 | WP_000154135.1 | hypothetical protein | - |
| C6999_RS30945 () | 43748..44389 | - | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| C6999_RS30960 () | 45091..46122 | + | 1032 | WP_000907857.1 | replication initiation protein | - |
| C6999_RS30975 () | 47082..56582 | - | 9501 | WP_042842256.1 | Toxin B | VF |
| C6999_RS30980 () | 56697..56927 | - | 231 | WP_001443774.1 | transposase | - |
| C6999_RS30985 () | 56934..57342 | + | 409 | Protein_47 | IS3 family transposase | - |
| C6999_RS30990 () | 57409..58909 | - | 1501 | Protein_48 | IS66 family transposase | - |
| C6999_RS30995 () | 58921..60073 | - | 1153 | Protein_49 | IS3 family transposase | - |
| C6999_RS31000 () | 60144..60530 | - | 387 | Protein_50 | IS66 family transposase ISEc23 | Transposase |
| C6999_RS31005 () | 60617..60731 | + | 115 | Protein_51 | IS3 family transposase | - |
| C6999_RS31010 () | 60782..62291 | - | 1510 | Protein_52 | ISL3 family transposase | - |
| C6999_RS31015 () | 62911..63910 | - | 1000 | Protein_53 | IS91 family transposase ISEc37 | Transposase |
| C6999_RS31025 () | 64501..65688 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| C6999_RS31030 () | 65688..66053 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| C6999_RS31040 () | 66454..66843 | - | 390 | Protein_56 | IS91 family transposase ISMno23 | Transposase |
| C6999_RS31045 () | 66877..68429 | - | 1553 | Protein_57 | IS66 family transposase ISSfl3 | Transposase |
| C6999_RS31050 () | 68449..68796 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6999_RS31055 () | 68793..69467 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6999_RS31060 () | 69521..69748 | - | 228 | WP_001341442.1 | transposase | - |
| C6999_RS31065 () | 69911..70888 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| C6999_RS31070 () | 71694..72907 | + | 1214 | WP_162908515.1 | IS3 family transposase IS629 | Transposase |
| C6999_RS31075 () | 73078..75288 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C6999_RS31080 () | 75332..75721 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C6999_RS31085 () | 75835..76602 | + | 768 | Protein_65 | IS3 family transposase | - |
| C6999_RS31090 () | 76682..77077 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| C6999_RS31095 () | 77077..78036 | - | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| C6999_RS31100 () | 78309..79211 | + | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| C6999_RS31105 () | 79208..79519 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| C6999_RS31110 () | 79595..80278 | + | 684 | WP_000086167.1 | DNA methylase | - |
| C6999_RS31115 () | 80278..80496 | + | 219 | WP_001443814.1 | hypothetical protein | - |
| C6999_RS31120 () | 80508..80942 | + | 435 | WP_000274418.1 | DUF1380 family protein | - |
| C6999_RS31820 () | 80987..81226 | + | 240 | Protein_73 | hypothetical protein | - |
| C6999_RS31825 () | 81221..81469 | + | 249 | Protein_74 | conjugation system SOS inhibitor PsiB | - |
| C6999_RS31130 () | 81466..82185 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C6999_RS31830 () | 82182..82779 | + | 598 | Protein_76 | hypothetical protein | - |
| C6999_RS31145 () | 83240..83740 | + | 501 | WP_000117628.1 | antirestriction protein ArdA | - |
| C6999_RS31835 () | 83742..84362 | - | 621 | WP_162137195.1 | hypothetical protein | - |
| C6999_RS31160 () | 84468..84902 | + | 435 | WP_000218854.1 | hypothetical protein | - |
| C6999_RS31165 () | 84995..85261 | + | 267 | WP_001247865.1 | hypothetical protein | - |
| C6999_RS31170 () | 85326..86216 | + | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| C6999_RS31175 () | 86216..86461 | + | 246 | WP_012605149.1 | hypothetical protein | - |
| C6999_RS31180 () | 86492..86743 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| C6999_RS31840 () | 86802..87077 | - | 276 | WP_001431784.1 | hypothetical protein | - |
| C6999_RS31190 () | 87322..88170 | + | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| C6999_RS31845 () | 88256..88339 | - | 84 | Protein_86 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|