MGE detailed information
MGE type: Genomic_island MGE length: 30400 bp
Accession: NZ_CP027579 Location: 2902290..2932689 Organism: Escherichia coli strain 2013C-4282 Replicon: chromosome
Accession: NZ_CP027579 Location: 2902290..2932689 Organism: Escherichia coli strain 2013C-4282 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6996_RS14705 () | 2897609..2898511 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| C6996_RS14710 () | 2898531..2899034 | - | 504 | WP_106907636.1 | type 1 fimbria minor subunit FimG | - |
| C6996_RS14715 () | 2899047..2899577 | - | 531 | WP_001355117.1 | type 1 fimbria minor subunit FimF | - |
| C6996_RS14720 () | 2899587..2902223 | - | 2637 | WP_106907637.1 | fimbrial usher FimD | - |
| C6996_RS14725 () | 2902290..2903015 | - | 726 | WP_106907638.1 | Chaperone protein FimC | VF |
| C6996_RS14730 () | 2903052..2903591 | - | 540 | WP_000824095.1 | Type-1 fimbrial protein, A chain | VF |
| C6996_RS14735 () | 2903656..2904204 | - | 549 | WP_106907639.1 | Fimbrial subunit type 1 | VF |
| C6996_RS14745 () | 2904684..2905280 | - | 597 | WP_000044720.1 | Tyrosine recombinase XerD | VF |
| C6996_RS14750 () | 2905758..2906360 | - | 603 | WP_000790582.1 | Tyrosine recombinase XerC | VF |
| C6996_RS26710 () | 2906770..2907015 | + | 246 | WP_032193988.1 | hypothetical protein | - |
| C6996_RS14765 () | 2907824..2908540 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| C6996_RS14770 () | 2908560..2909666 | + | 1107 | WP_106907642.1 | N-acetylneuraminate epimerase | - |
| C6996_RS14775 () | 2909731..2910711 | + | 981 | WP_106907643.1 | sialate O-acetylesterase | - |
| C6996_RS14780 () | 2911294..2914809 | - | 3516 | WP_106907644.1 | helicase YjhR | - |
| C6996_RS14785 () | 2915243..2916040 | - | 798 | WP_106907645.1 | hypothetical protein | VF |
| C6996_RS14790 () | 2916155..2916430 | - | 276 | WP_106907646.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6996_RS14795 () | 2916434..2916682 | - | 249 | WP_000535212.1 | ribbon-helix-helix domain-containing protein | - |
| C6996_RS14800 () | 2916758..2917591 | - | 834 | WP_106907647.1 | DUF4942 domain-containing protein | - |
| C6996_RS14805 () | 2917706..2918047 | - | 342 | WP_106907648.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6996_RS14810 () | 2918078..2918413 | - | 336 | WP_000939437.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6996_RS14815 () | 2918413..2918886 | - | 474 | WP_001292742.1 | DNA repair protein RadC | - |
| C6996_RS14820 () | 2918916..2919734 | - | 819 | WP_106907649.1 | DUF945 domain-containing protein | - |
| C6996_RS14825 () | 2919970..2920923 | - | 954 | WP_000290407.1 | hypothetical protein | - |
| C6996_RS14830 () | 2921516..2922130 | + | 615 | WP_106907650.1 | inovirus Gp2 family protein | - |
| C6996_RS14835 () | 2922248..2922466 | + | 219 | WP_001064742.1 | AlpA family phage regulatory protein | - |
| C6996_RS14840 () | 2922687..2923472 | - | 786 | WP_106907651.1 | hypothetical protein | - |
| C6996_RS14845 () | 2923484..2924497 | - | 1014 | WP_106907652.1 | 50S ribosome-binding GTPase | - |
| C6996_RS14850 () | 2924536..2925219 | - | 684 | WP_180561836.1 | transcriptional regulator | - |
| C6996_RS14855 () | 2925796..2929209 | + | 3414 | WP_105279021.1 | DEAD/DEAH box helicase family protein | - |
| C6996_RS14860 () | 2929273..2930907 | + | 1635 | WP_106907654.1 | type I restriction-modification system subunit M | - |
| C6996_RS14865 () | 2930904..2932088 | + | 1185 | WP_106907655.1 | restriction endonuclease subunit S | - |
| C6996_RS14870 () | 2932144..2932689 | + | 546 | WP_106907656.1 | hypothetical protein | - |
| C6996_RS14875 () | 2932810..2933775 | + | 966 | WP_106907657.1 | 5'-nucleotidase | - |
| C6996_RS14880 () | 2933853..2934728 | - | 876 | Protein_2736 | HNH endonuclease | - |
| C6996_RS14885 () | 2934944..2936212 | - | 1269 | WP_106907658.1 | integrase arm-type DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|