MGE detailed information
MGE type: Prophage MGE length: 64959 bp
Accession: NZ_CP027573 Location: 974655..1039613 Organism: Escherichia coli strain 2013C-4081 Replicon: chromosome
Accession: NZ_CP027573 Location: 974655..1039613 Organism: Escherichia coli strain 2013C-4081 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A2F94_RS05365 () | 970265..970906 | + | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
| A2F94_RS05370 () | 970910..972280 | + | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| A2F94_RS05375 () | 972448..973119 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| A2F94_RS05380 () | 973119..974579 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| A2F94_RS05385 () | 974655..975776 | + | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| A2F94_RS05390 () | 975922..977151 | - | 1230 | WP_000359442.1 | peptidase T | - |
| A2F94_RS05400 () | 977401..978537 | + | 1137 | WP_000531601.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A2F94_RS05405 () | 978521..979384 | + | 864 | WP_000799400.1 | spermidine/putrescine ABC transporter permease PotB | - |
| A2F94_RS05415 () | 979748..981109 | + | 1362 | WP_000938117.1 | hypothetical protein | VF |
| A2F94_RS05420 () | 981170..981445 | + | 276 | WP_001303921.1 | hypothetical protein | - |
| A2F94_RS05425 () | 981525..981638 | - | 114 | Protein_1008 | non-LEE encoded effector protein NleB | - |
| A2F94_RS31005 () | 981673..981891 | - | 219 | Protein_1009 | IS256 family transposase ISSoEn2 | Transposase |
| A2F94_RS31010 () | 981891..982043 | + | 153 | Protein_1010 | IS256 family transposase ISSoEn2 | Transposase |
| A2F94_RS05435 () | 982420..985821 | - | 3402 | WP_001369471.1 | hypothetical protein | VF |
| A2F94_RS05440 () | 986412..988760 | - | 2349 | WP_001301673.1 | hypothetical protein | VF |
| A2F94_RS30610 () | 988780..988869 | - | 90 | WP_115801847.1 | hypothetical protein | - |
| A2F94_RS30615 () | 988882..988974 | - | 93 | Protein_1014 | tail assembly protein | - |
| A2F94_RS05445 () | 988976..989245 | - | 270 | WP_001023356.1 | phage tail fiber C-terminal domain-containing protein | - |
| A2F94_RS05450 () | 989247..990569 | - | 1323 | WP_000268887.1 | ISNCY family transposase KIS | Transposase |
| A2F94_RS05455 () | 990634..991233 | - | 600 | WP_001230459.1 | hypothetical protein | VF |
| A2F94_RS05460 () | 991300..994779 | - | 3480 | WP_106904965.1 | host specificity protein J | - |
| A2F94_RS05465 () | 995016..995648 | - | 633 | WP_122996286.1 | tail assembly protein | - |
| A2F94_RS05470 () | 995594..996331 | - | 738 | WP_000967279.1 | C40 family peptidase | - |
| A2F94_RS05475 () | 996386..997308 | - | 923 | Protein_1021 | phage antirepressor Ant | - |
| A2F94_RS05480 () | 997379..997552 | - | 174 | WP_001154345.1 | Arc family DNA-binding protein | - |
| A2F94_RS05485 () | 997660..997980 | + | 321 | WP_001302649.1 | Arc family DNA-binding protein | - |
| A2F94_RS05490 () | 997997..998695 | - | 699 | WP_024222304.1 | phage minor tail protein L | - |
| A2F94_RS05495 () | 998695..999036 | - | 342 | WP_000807964.1 | phage tail protein | - |
| A2F94_RS05500 () | 999029..1002271 | - | 3243 | WP_000212952.1 | phage tail tape measure protein | - |
| A2F94_RS05505 () | 1002323..1002532 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| A2F94_RS05510 () | 1002628..1003002 | - | 375 | WP_001030043.1 | phage tail assembly chaperone | - |
| A2F94_RS05515 () | 1003008..1003724 | - | 717 | WP_001275461.1 | immunoglobulin domain-containing protein | - |
| A2F94_RS05520 () | 1003791..1004135 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| A2F94_RS05525 () | 1004132..1004578 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| A2F94_RS05530 () | 1004575..1004925 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| A2F94_RS05535 () | 1004935..1005261 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| A2F94_RS05540 () | 1005258..1007679 | - | 2422 | Protein_1034 | phage portal protein | - |
| A2F94_RS05545 () | 1007625..1007846 | - | 222 | WP_001063096.1 | hypothetical protein | - |
| A2F94_RS05550 () | 1007891..1009828 | - | 1938 | WP_000173088.1 | phage major capsid protein | - |
| A2F94_RS05555 () | 1009892..1011553 | - | 1662 | WP_009453642.1 | terminase large subunit | - |
| A2F94_RS05560 () | 1011550..1012113 | - | 564 | WP_000958398.1 | terminase small subunit | - |
| A2F94_RS05565 () | 1012229..1012759 | - | 531 | WP_001377217.1 | HNH endonuclease | - |
| A2F94_RS05570 () | 1012801..1012893 | + | 93 | Protein_1040 | DUF3950 domain-containing protein | - |
| A2F94_RS05575 () | 1013013..1013327 | - | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| A2F94_RS30620 () | 1013855..1014040 | - | 186 | WP_001208681.1 | Rz1 family lipoprotein | - |
| A2F94_RS05590 () | 1014257..1014754 | - | 498 | WP_000075132.1 | lysozyme RrrD | - |
| A2F94_RS05595 () | 1014754..1014969 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| A2F94_RS05605 () | 1015409..1017259 | - | 1851 | WP_000874287.1 | DUF1737 domain-containing protein | - |
| A2F94_RS05625 () | 1018056..1019114 | - | 1059 | WP_000935544.1 | site-specific DNA-methyltransferase | - |
| A2F94_RS30625 () | 1019265..1019462 | - | 198 | WP_000917750.1 | hypothetical protein | - |
| A2F94_RS05635 () | 1019704..1020234 | - | 531 | WP_024222354.1 | DUF1133 family protein | - |
| A2F94_RS05640 () | 1020243..1020608 | - | 366 | WP_000140024.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A2F94_RS05645 () | 1020609..1021664 | - | 1056 | WP_001369253.1 | DUF968 domain-containing protein | - |
| A2F94_RS05650 () | 1021666..1021938 | - | 273 | WP_012817871.1 | hypothetical protein | - |
| A2F94_RS05660 () | 1022106..1022246 | - | 141 | WP_072058819.1 | type I toxin-antitoxin system Hok family toxin | - |
| A2F94_RS05665 () | 1022284..1023497 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| A2F94_RS05670 () | 1023537..1023953 | - | 417 | WP_023981635.1 | DUF977 family protein | - |
| A2F94_RS05675 () | 1023994..1024956 | - | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| A2F94_RS05680 () | 1024979..1025404 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| A2F94_RS05685 () | 1025401..1025703 | - | 303 | WP_001444689.1 | transcriptional regulator | - |
| A2F94_RS05690 () | 1025801..1026172 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| A2F94_RS05695 () | 1026193..1026384 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| A2F94_RS05700 () | 1026386..1026664 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A2F94_RS05710 () | 1026960..1027349 | + | 390 | WP_001447517.1 | hypothetical protein | - |
| A2F94_RS05715 () | 1027390..1027608 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| A2F94_RS05725 () | 1028092..1028280 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| A2F94_RS05730 () | 1028277..1028468 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| A2F94_RS05735 () | 1028561..1031026 | + | 2466 | WP_000048442.1 | exonuclease | - |
| A2F94_RS05740 () | 1031088..1031357 | + | 270 | WP_000003742.1 | excisionase | - |
| A2F94_RS05745 () | 1031326..1032444 | + | 1119 | WP_000074981.1 | hypothetical protein ; Integrase | Integrase |
| A2F94_RS05750 () | 1032611..1033405 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| A2F94_RS05755 () | 1033402..1034448 | + | 1047 | WP_000759338.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| A2F94_RS05760 () | 1034506..1034967 | + | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| A2F94_RS05765 () | 1034964..1035752 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| A2F94_RS05770 () | 1035891..1036712 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| A2F94_RS05775 () | 1036728..1037639 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| A2F94_RS05780 () | 1037668..1038912 | - | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| A2F94_RS05785 () | 1038912..1039613 | - | 702 | WP_001033694.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A2F94_RS05790 () | 1039606..1040805 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| A2F94_RS05795 () | 1041067..1042140 | + | 1074 | WP_000810250.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|