MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91046 bp
Accession: NZ_CP027556 Location: 1..91046 Organism: Escherichia coli strain 2013C-3513 Replicon: plasmid unnamed2
Accession: NZ_CP027556 Location: 1..91046 Organism: Escherichia coli strain 2013C-3513 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6991_RS30865 () | 1..238 | + | 238 | WP_106881563.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C6991_RS30870 () | 324..1172 | - | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| C6991_RS32235 () | 1522..1718 | + | 197 | Protein_2 | hypothetical protein | - |
| C6991_RS30880 () | 1752..2003 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| C6991_RS30885 () | 2034..2255 | - | 222 | WP_077776889.1 | hypothetical protein | - |
| C6991_RS30890 () | 2278..3168 | - | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| C6991_RS30895 () | 3233..3499 | - | 267 | WP_001247865.1 | hypothetical protein | - |
| C6991_RS30900 () | 3592..4026 | - | 435 | WP_000218854.1 | hypothetical protein | - |
| C6991_RS30905 () | 4023..4238 | - | 216 | WP_000284691.1 | hypothetical protein | - |
| C6991_RS30915 () | 4754..5254 | - | 501 | WP_000117628.1 | antirestriction protein ArdA | - |
| C6991_RS32240 () | 5716..6313 | - | 598 | Protein_10 | hypothetical protein | - |
| C6991_RS30930 () | 6310..7029 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C6991_RS32245 () | 7026..7274 | - | 249 | Protein_12 | conjugation system SOS inhibitor PsiB | - |
| C6991_RS32250 () | 7269..7508 | - | 240 | Protein_13 | hypothetical protein | - |
| C6991_RS30940 () | 7553..7987 | - | 435 | WP_000274418.1 | DUF1380 family protein | - |
| C6991_RS30945 () | 7999..8217 | - | 219 | WP_001443814.1 | hypothetical protein | - |
| C6991_RS30950 () | 8217..8900 | - | 684 | WP_032324142.1 | DNA methylase | - |
| C6991_RS30955 () | 8976..9287 | - | 312 | WP_012680995.1 | hypothetical protein | - |
| C6991_RS32255 () | 9284..10187 | - | 904 | Protein_18 | DUF1281 domain-containing protein | - |
| C6991_RS30965 () | 10460..11419 | + | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| C6991_RS30970 () | 11419..11814 | + | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| C6991_RS30975 () | 11894..12473 | - | 580 | Protein_21 | IS3 family transposase | - |
| C6991_RS30985 () | 13741..13928 | - | 188 | Protein_23 | IS3 family transposase IS629 | Transposase |
| C6991_RS30990 () | 14042..14431 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C6991_RS30995 () | 14475..16685 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C6991_RS31010 () | 18877..19854 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| C6991_RS31015 () | 20017..20244 | + | 228 | WP_001341442.1 | transposase | - |
| C6991_RS31020 () | 20298..20972 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6991_RS31025 () | 20969..21316 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6991_RS31030 () | 21336..22888 | + | 1553 | Protein_31 | IS66 family transposase ISSfl3 | Transposase |
| C6991_RS31035 () | 22922..23311 | + | 390 | Protein_32 | IS91 family transposase ISMno23 | Transposase |
| C6991_RS31045 () | 23712..24077 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6991_RS31050 () | 24077..25264 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| C6991_RS31060 () | 25855..26870 | + | 1016 | Protein_35 | IS91 family transposase ISEc37 | Transposase |
| C6991_RS31065 () | 27490..28999 | + | 1510 | Protein_36 | ISL3 family transposase | - |
| C6991_RS31070 () | 29050..29164 | - | 115 | Protein_37 | IS3 family transposase | - |
| C6991_RS31075 () | 29251..29637 | + | 387 | Protein_38 | IS66 family transposase ISEc23 | Transposase |
| C6991_RS31080 () | 29708..30860 | + | 1153 | Protein_39 | IS3 family transposase | - |
| C6991_RS31085 () | 30872..32372 | + | 1501 | Protein_40 | IS66 family transposase | - |
| C6991_RS32260 () | 32439..32847 | - | 409 | Protein_41 | IS3 family transposase | - |
| C6991_RS31095 () | 32854..33084 | + | 231 | WP_001443774.1 | transposase | - |
| C6991_RS31100 () | 33199..42698 | + | 9500 | Protein_43 | Toxin B | VF |
| C6991_RS31115 () | 43658..44689 | - | 1032 | WP_000907857.1 | replication initiation protein | - |
| C6991_RS31130 () | 45398..46039 | + | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| C6991_RS31135 () | 46180..46845 | + | 666 | WP_000154135.1 | hypothetical protein | - |
| C6991_RS31145 () | 47112..47471 | + | 360 | Protein_47 | DUF1449 family protein | - |
| C6991_RS31150 () | 47505..49057 | - | 1553 | Protein_48 | IS66 family transposase ISSfl3 | Transposase |
| C6991_RS31155 () | 49077..49424 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6991_RS31160 () | 49421..50095 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6991_RS31165 () | 50149..50535 | - | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| C6991_RS31170 () | 50663..51523 | + | 861 | WP_000704534.1 | putative protein YcjY | VF |
| C6991_RS31985 () | 52012..52287 | + | 276 | WP_157776129.1 | hypothetical protein | - |
| C6991_RS31180 () | 53552..54097 | + | 546 | WP_001165114.1 | hypothetical protein | - |
| C6991_RS31185 () | 54259..54675 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C6991_RS31190 () | 54672..54902 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C6991_RS31210 () | 55462..55848 | + | 387 | WP_106881569.1 | hypothetical protein | - |
| C6991_RS31215 () | 55850..56632 | + | 783 | WP_001164205.1 | site-specific integrase | - |
| C6991_RS31220 () | 56805..57158 | + | 354 | WP_000864810.1 | colicin M immunity protein | - |
| C6991_RS31225 () | 57166..57357 | - | 192 | Protein_61 | lipid II-degrading bacteriocin | - |
| C6991_RS31230 () | 57361..57504 | - | 144 | Protein_62 | transcriptional regulator | - |
| C6991_RS31235 () | 57571..59010 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6991_RS31240 () | 59014..61134 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6991_RS31245 () | 61184..64180 | - | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| C6991_RS31250 () | 64182..64697 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C6991_RS31260 () | 65220..65872 | - | 653 | Protein_67 | IS3 family transposase IS629 | Transposase |
| C6991_RS31270 () | 67345..68164 | + | 820 | Protein_68 | polysaccharide deacetylase family protein | - |
| C6991_RS31275 () | 68164..69270 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C6991_RS31280 () | 69364..71085 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C6991_RS31285 () | 71159..72157 | + | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C6991_RS31290 () | 72210..72398 | + | 189 | Protein_72 | hypothetical protein | - |
| C6991_RS31295 () | 72461..73999 | - | 1539 | WP_012917688.1 | IS66 family transposase ISEc8 | Transposase |
| C6991_RS31300 () | 74049..74396 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C6991_RS31310 () | 74633..74998 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6991_RS31315 () | 74998..76185 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| C6991_RS31320 () | 76464..78016 | - | 1553 | Protein_77 | IS66 family transposase ISSfl3 | Transposase |
| C6991_RS31325 () | 78036..78383 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6991_RS31330 () | 78380..79054 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6991_RS31995 () | 78985..79404 | + | 420 | WP_136139077.1 | DUF1449 family protein | - |
| C6991_RS31345 () | 79452..79664 | - | 213 | Protein_81 | IS3 family transposase ISSfl10 | Transposase |
| C6991_RS31350 () | 79726..79899 | + | 174 | Protein_82 | IS66 family transposase | - |
| C6991_RS31355 () | 80342..84244 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| C6991_RS31365 () | 84788..85000 | + | 213 | Protein_84 | IS3 family transposase ISSfl10 | Transposase |
| C6991_RS31370 () | 85048..85461 | - | 414 | WP_136138333.1 | DUF1449 family protein | - |
| C6991_RS31380 () | 85460..86673 | + | 1214 | WP_162908518.1 | IS3 family transposase IS629 | Transposase |
| C6991_RS32265 () | 86714..87402 | - | 689 | Protein_87 | IS3 family transposase IS600 | Transposase |
| C6991_RS31390 () | 87441..87761 | + | 321 | WP_001341409.1 | hypothetical protein | - |
| C6991_RS31395 () | 87982..90702 | - | 2721 | WP_000991402.1 | Protein TraI | Relaxase |
| C6991_RS31400 () | 90714..91045 | - | 332 | Protein_90 | nikA protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|