MGE detailed information
MGE type: Prophage MGE length: 51249 bp
Accession: NZ_CP027555 Location: 907376..958624 Organism: Escherichia coli strain 2013C-3513 Replicon: chromosome
Accession: NZ_CP027555 Location: 907376..958624 Organism: Escherichia coli strain 2013C-3513 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6991_RS05740 () | 902573..905206 | + | 2634 | WP_001299674.1 | lipid-binding membrane homeostasis protein YebT | - |
| C6991_RS05745 () | 905286..906725 | + | 1440 | WP_000057024.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C6991_RS05750 () | 906843..907079 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| C6991_RS05755 () | 907184..907375 | + | 192 | WP_001296140.1 | YebW family protein | - |
| C6991_RS05760 () | 907376..908032 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| C6991_RS05770 () | 908717..908983 | + | 267 | Protein_956 | hypothetical protein | - |
| C6991_RS31615 () | 908987..909637 | + | 651 | WP_001121225.1 | Selenocysteine-containing peroxiredoxin PrxU | VF |
| C6991_RS05785 () | 909862..910737 | - | 876 | WP_000491545.1 | Sulfate-binding protein | VF |
| C6991_RS05790 () | 910878..911147 | - | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6991_RS05795 () | 911149..912462 | - | 1314 | WP_106881405.1 | ISNCY family transposase KIS | Transposase |
| C6991_RS05800 () | 912527..913126 | - | 600 | WP_001230428.1 | Sulfate transport system permease protein CysW | VF |
| C6991_RS05805 () | 913194..916586 | - | 3393 | WP_106881407.1 | host specificity protein J | - |
| C6991_RS05810 () | 916832..917464 | - | 633 | WP_136865658.1 | tail assembly protein | - |
| C6991_RS05815 () | 917410..918153 | - | 744 | WP_032325227.1 | C40 family peptidase | - |
| C6991_RS05820 () | 918164..918862 | - | 699 | WP_001152185.1 | phage minor tail protein L | - |
| C6991_RS05825 () | 918862..919191 | - | 330 | WP_000847302.1 | phage tail protein | - |
| C6991_RS05830 () | 919188..921767 | - | 2580 | WP_106881409.1 | phage tail tape measure protein | - |
| C6991_RS05835 () | 921748..922161 | - | 414 | WP_000533431.1 | phage tail assembly protein T | - |
| C6991_RS05840 () | 922188..922619 | - | 432 | Protein_969 | phage minor tail protein G | - |
| C6991_RS05845 () | 922633..923385 | - | 753 | WP_032325228.1 | phage tail protein | - |
| C6991_RS05850 () | 923393..923788 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| C6991_RS05855 () | 923785..924363 | - | 579 | WP_000975099.1 | phage tail protein | - |
| C6991_RS05860 () | 924375..924728 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| C6991_RS05865 () | 924740..925135 | - | 396 | WP_022581670.1 | DNA-packaging protein FI | - |
| C6991_RS05870 () | 925177..926202 | - | 1026 | WP_000063258.1 | major capsid protein | - |
| C6991_RS05875 () | 926258..926590 | - | 333 | WP_001365129.1 | head decoration protein | - |
| C6991_RS05880 () | 926600..927919 | - | 1320 | WP_000123292.1 | S49 family peptidase | - |
| C6991_RS05885 () | 927900..929501 | - | 1602 | WP_001443752.1 | phage portal protein | - |
| C6991_RS05890 () | 929498..929704 | - | 207 | WP_000198153.1 | gpW family protein | - |
| C6991_RS05895 () | 929701..931626 | - | 1926 | Protein_980 | phage terminase large subunit family protein | - |
| C6991_RS05900 () | 931601..932146 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| C6991_RS05910 () | 932535..932729 | + | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| C6991_RS05920 () | 932917..933534 | - | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| C6991_RS05925 () | 933684..934121 | - | 438 | WP_000092325.1 | lysis protein | - |
| C6991_RS05930 () | 934118..934615 | - | 498 | WP_000075132.1 | lysozyme RrrD | - |
| C6991_RS05935 () | 934615..934830 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| C6991_RS05945 () | 935269..937119 | - | 1851 | WP_000143049.1 | SASA family carbohydrate esterase | - |
| C6991_RS05950 () | 937441..937693 | - | 253 | Protein_988 | DUF3927 family protein | - |
| C6991_RS05955 () | 937690..938052 | - | 363 | Protein_989 | tellurite resistance TerB family protein | - |
| C6991_RS05960 () | 938290..939111 | - | 822 | WP_000762928.1 | antitermination protein | - |
| C6991_RS05965 () | 939108..939482 | - | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6991_RS05970 () | 939495..940544 | - | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C6991_RS05975 () | 940546..940818 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| C6991_RS05980 () | 940940..941284 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C6991_RS05985 () | 941404..941559 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| C6991_RS05990 () | 941850..942407 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| C6991_RS05995 () | 942409..942627 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C6991_RS06000 () | 942755..943066 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| C6991_RS06005 () | 943059..943286 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| C6991_RS06010 () | 943283..943564 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| C6991_RS06015 () | 943597..944358 | - | 762 | WP_000450872.1 | DUF1627 domain-containing protein | - |
| C6991_RS06020 () | 944384..945125 | - | 742 | Protein_1002 | ATP-binding protein | - |
| C6991_RS06025 () | 945132..946094 | - | 963 | WP_001444941.1 | helix-turn-helix domain-containing protein | - |
| C6991_RS06030 () | 946117..946542 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C6991_RS06035 () | 946539..946841 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| C6991_RS06040 () | 946939..947310 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| C6991_RS06045 () | 947331..947522 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C6991_RS06050 () | 947524..947802 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6991_RS06055 () | 948089..948241 | + | 153 | WP_001427316.1 | DUF1391 family protein | - |
| C6991_RS06060 () | 948662..948883 | + | 222 | WP_000560218.1 | killing protein KilR | - |
| C6991_RS06065 () | 948877..949053 | + | 177 | WP_000245534.1 | hypothetical protein | - |
| C6991_RS06070 () | 949127..949402 | + | 276 | WP_001307773.1 | hypothetical protein | - |
| C6991_RS06075 () | 949501..952151 | + | 2651 | Protein_1013 | exodeoxyribonuclease VIII | - |
| C6991_RS06080 () | 952144..952953 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| C6991_RS06085 () | 953010..953204 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| C6991_RS06090 () | 953197..953385 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 953203..953381 | - | 179 | NuclAT_1 | - | - |
| - () | 953203..953381 | - | 179 | NuclAT_1 | - | - |
| - () | 953203..953381 | - | 179 | NuclAT_1 | - | - |
| - () | 953203..953381 | - | 179 | NuclAT_1 | - | - |
| C6991_RS06095 () | 953492..953773 | + | 282 | WP_001443927.1 | excisionase | - |
| C6991_RS06100 () | 953739..954815 | + | 1077 | WP_001189091.1 | Motility protein A ; Integrase | Integrase |
| - () | 954946..955180 | + | 235 | - | - | Antitoxin Detail |
| - () | 954947..955050 | - | 104 | - | - | Toxin Detail |
| C6991_RS06105 () | 955208..955549 | - | 342 | WP_000976492.1 | YebY family protein | - |
| C6991_RS06110 () | 955562..956433 | - | 872 | Protein_1020 | copper homeostasis membrane protein CopD | - |
| C6991_RS06115 () | 956437..956811 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| C6991_RS06120 () | 956950..957180 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| C6991_RS06125 () | 957282..957938 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| C6991_RS06130 () | 957962..958624 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| C6991_RS06135 () | 958621..960681 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| C6991_RS06140 () | 960890..961549 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| C6991_RS06145 () | 961876..962232 | - | 357 | WP_001295500.1 | protein YebF | - |
| C6991_RS06150 () | 962299..962589 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|