MGE detailed information
MGE type: Prophage MGE length: 79966 bp
Accession: NZ_CP027552 Location: 2851471..2931436 Organism: Escherichia coli strain 2015C-4498 Replicon: chromosome
Accession: NZ_CP027552 Location: 2851471..2931436 Organism: Escherichia coli strain 2015C-4498 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6953_RS15045 () | 2847378..2848577 | + | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| C6953_RS15050 () | 2848570..2849271 | + | 702 | WP_001033694.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| C6953_RS15055 () | 2849271..2850515 | + | 1245 | WP_024168809.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| C6953_RS15060 () | 2850544..2851455 | + | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| C6953_RS15065 () | 2851471..2852292 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| C6953_RS15070 () | 2852431..2853219 | - | 789 | WP_044805759.1 | hypothetical protein | - |
| C6953_RS15075 () | 2853216..2853677 | - | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| C6953_RS15080 () | 2853735..2854781 | - | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| C6953_RS15085 () | 2854778..2855572 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| C6953_RS15090 () | 2855739..2856857 | - | 1119 | WP_000074981.1 | hypothetical protein ; Integrase | Integrase |
| C6953_RS15095 () | 2856826..2857095 | - | 270 | WP_000003742.1 | excisionase | - |
| C6953_RS15100 () | 2857157..2859628 | - | 2472 | WP_106878764.1 | exonuclease | - |
| C6953_RS15105 () | 2859721..2859912 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C6953_RS15110 () | 2859909..2860097 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C6953_RS15120 () | 2860666..2860884 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C6953_RS15125 () | 2860956..2861255 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C6953_RS15135 () | 2861608..2861886 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6953_RS15140 () | 2861888..2862079 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C6953_RS15145 () | 2862100..2862471 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| C6953_RS15150 () | 2862569..2862871 | + | 303 | WP_106884078.1 | transcriptional regulator | - |
| C6953_RS15155 () | 2862868..2863293 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C6953_RS15160 () | 2863316..2864278 | + | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| C6953_RS15165 () | 2864319..2864741 | + | 423 | WP_001151120.1 | DUF977 family protein | - |
| C6953_RS15170 () | 2864738..2864992 | + | 255 | WP_000004322.1 | hypothetical protein | - |
| C6953_RS15175 () | 2864985..2865296 | + | 312 | WP_001002672.1 | hypothetical protein | - |
| C6953_RS15180 () | 2865602..2866180 | + | 579 | WP_001204666.1 | sce7726 family protein | - |
| C6953_RS15185 () | 2866140..2867237 | - | 1098 | WP_000156210.1 | beta family protein | - |
| C6953_RS15190 () | 2867795..2867950 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6953_RS15200 () | 2868118..2868390 | + | 273 | WP_012817871.1 | hypothetical protein | - |
| C6953_RS15205 () | 2868392..2869447 | + | 1056 | WP_106884079.1 | DUF968 domain-containing protein | - |
| C6953_RS15210 () | 2869448..2869813 | + | 366 | WP_000140024.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6953_RS15215 () | 2869822..2870352 | + | 531 | WP_000640048.1 | DUF1133 family protein | - |
| C6953_RS29740 () | 2870594..2870791 | + | 198 | WP_000917750.1 | hypothetical protein | - |
| C6953_RS15225 () | 2870942..2872000 | + | 1059 | WP_106884080.1 | site-specific DNA-methyltransferase | - |
| C6953_RS15245 () | 2872797..2874647 | + | 1851 | WP_106884081.1 | SASA family carbohydrate esterase | - |
| C6953_RS15255 () | 2875086..2875301 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| C6953_RS15260 () | 2875306..2875650 | + | 345 | WP_000731236.1 | YdfR family protein | - |
| C6953_RS15265 () | 2875701..2876234 | + | 534 | WP_106878762.1 | lysozyme | - |
| C6953_RS15270 () | 2876505..2877074 | + | 570 | WP_106884082.1 | hypothetical protein | - |
| C6953_RS29745 () | 2877074..2877220 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C6953_RS29755 () | 2877448..2877633 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C6953_RS15280 () | 2878058..2878285 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C6953_RS15285 () | 2878327..2878692 | + | 366 | WP_025380422.1 | HNH endonuclease | - |
| C6953_RS15295 () | 2878981..2879544 | + | 564 | WP_000958392.1 | terminase small subunit | - |
| C6953_RS15300 () | 2879541..2881202 | + | 1662 | WP_106884083.1 | terminase large subunit | - |
| C6953_RS15305 () | 2881266..2883206 | + | 1941 | WP_106884084.1 | phage major capsid protein | - |
| C6953_RS15310 () | 2883251..2883472 | + | 222 | WP_001063096.1 | hypothetical protein | - |
| C6953_RS15315 () | 2883418..2885604 | + | 2187 | Protein_2762 | phage portal protein | - |
| C6953_RS15325 () | 2886149..2886475 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| C6953_RS15330 () | 2886485..2886835 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| C6953_RS15335 () | 2886832..2887278 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C6953_RS15340 () | 2887275..2887619 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C6953_RS15345 () | 2887686..2888402 | + | 717 | WP_106883934.1 | immunoglobulin domain-containing protein | - |
| C6953_RS15350 () | 2888408..2888782 | + | 375 | WP_001030047.1 | phage tail assembly chaperone | - |
| C6953_RS15355 () | 2888878..2889087 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C6953_RS15360 () | 2889139..2892382 | + | 3244 | Protein_2770 | phage tail tape measure protein | - |
| C6953_RS15365 () | 2892375..2892716 | + | 342 | WP_000807940.1 | phage tail protein | - |
| C6953_RS15370 () | 2892716..2893414 | + | 699 | WP_106883936.1 | phage minor tail protein L | - |
| C6953_RS15375 () | 2893431..2893751 | - | 321 | WP_001302649.1 | Arc family DNA-binding protein | - |
| C6953_RS15380 () | 2893859..2894032 | + | 174 | WP_001154345.1 | Arc family DNA-binding protein | - |
| C6953_RS15385 () | 2894103..2895026 | + | 924 | WP_106884279.1 | phage antirepressor Ant | - |
| C6953_RS15390 () | 2895081..2895818 | + | 738 | WP_106878694.1 | C40 family peptidase | - |
| C6953_RS15395 () | 2895764..2896396 | + | 633 | WP_159028791.1 | tail assembly protein | - |
| C6953_RS15400 () | 2896645..2900124 | + | 3480 | WP_106884086.1 | host specificity protein J | - |
| C6953_RS15405 () | 2900191..2900790 | + | 600 | WP_106884047.1 | hypothetical protein | VF |
| C6953_RS15410 () | 2900855..2902168 | + | 1314 | WP_106884087.1 | ISNCY family transposase KIS | Transposase |
| C6953_RS15415 () | 2902170..2902439 | + | 270 | WP_106878697.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6953_RS29760 () | 2902441..2902533 | + | 93 | Protein_2782 | tail assembly protein | - |
| C6953_RS29765 () | 2902546..2902635 | + | 90 | WP_115801847.1 | hypothetical protein | - |
| C6953_RS15420 () | 2902655..2905003 | + | 2349 | WP_001301673.1 | hypothetical protein | VF |
| C6953_RS15425 () | 2905594..2908995 | + | 3402 | WP_001301984.1 | hypothetical protein | VF |
| C6953_RS30105 () | 2909372..2909527 | - | 156 | Protein_2786 | IS256 family transposase ISSoEn2 | Transposase |
| C6953_RS30110 () | 2909524..2909739 | + | 216 | Protein_2787 | IS256 family transposase ISSoEn2 | Transposase |
| C6953_RS15435 () | 2909774..2909887 | + | 114 | Protein_2788 | non-LEE encoded effector protein NleB | - |
| C6953_RS15440 () | 2909967..2910242 | - | 276 | WP_044806029.1 | hypothetical protein | - |
| C6953_RS15445 () | 2910303..2911664 | - | 1362 | WP_024228725.1 | hypothetical protein | VF |
| C6953_RS15455 () | 2912028..2912891 | - | 864 | WP_000799400.1 | spermidine/putrescine ABC transporter permease PotB | - |
| C6953_RS15460 () | 2912875..2914011 | - | 1137 | WP_000531601.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C6953_RS15470 () | 2914261..2915490 | + | 1230 | WP_000359438.1 | peptidase T | - |
| C6953_RS15475 () | 2915636..2916757 | - | 1122 | WP_044806027.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| C6953_RS15480 () | 2917006..2918234 | + | 1229 | Protein_2795 | tyrosine-type recombinase/integrase | - |
| C6953_RS15485 () | 2918599..2918787 | + | 189 | WP_000953272.1 | AlpA family transcriptional regulator | - |
| C6953_RS15490 () | 2918845..2919588 | + | 744 | WP_001304194.1 | hypothetical protein | - |
| C6953_RS15495 () | 2919614..2919811 | + | 198 | WP_001453500.1 | host cell division inhibitor Icd-like protein | - |
| C6953_RS15500 () | 2919804..2919989 | + | 186 | WP_000920682.1 | hypothetical protein | - |
| C6953_RS15505 () | 2919989..2920180 | + | 192 | WP_000659212.1 | hypothetical protein | - |
| C6953_RS15510 () | 2920170..2920412 | + | 243 | WP_000794515.1 | hypothetical protein | - |
| C6953_RS15515 () | 2920418..2920717 | + | 300 | WP_000770148.1 | DUF4222 domain-containing protein | - |
| C6953_RS15520 () | 2920714..2922846 | + | 2133 | WP_000761781.1 | DUF927 domain-containing protein | - |
| C6953_RS15530 () | 2923217..2923468 | + | 252 | WP_000198852.1 | hypothetical protein | - |
| C6953_RS15535 () | 2923465..2923875 | + | 411 | WP_000126692.1 | single-stranded DNA-binding protein | - |
| C6953_RS15540 () | 2923886..2924158 | + | 273 | Protein_2806 | PerC family transcriptional regulator | - |
| C6953_RS15550 () | 2924283..2924507 | + | 225 | WP_001132080.1 | hypothetical protein | - |
| C6953_RS15555 () | 2924800..2925957 | + | 1158 | WP_001137345.1 | phage major capsid protein | - |
| C6953_RS15560 () | 2925997..2926569 | + | 573 | WP_000504050.1 | HK97 family phage prohead protease | - |
| C6953_RS15565 () | 2926571..2927782 | + | 1212 | WP_000267612.1 | phage portal protein | - |
| C6953_RS15570 () | 2927779..2928117 | + | 339 | WP_001020660.1 | phage head closure protein | - |
| C6953_RS15575 () | 2928114..2928410 | + | 297 | WP_000134113.1 | head-tail connector protein | - |
| C6953_RS15580 () | 2928410..2928850 | + | 441 | WP_001145903.1 | HNH endonuclease | - |
| C6953_RS30115 () | 2928834..2929016 | + | 183 | WP_000174068.1 | hypothetical protein | - |
| C6953_RS15590 () | 2929140..2929496 | + | 357 | WP_000113645.1 | phage terminase small subunit P27 family | - |
| C6953_RS15595 () | 2929480..2931141 | + | 1662 | WP_000127893.1 | terminase large subunit | - |
| C6953_RS15600 () | 2931155..2931436 | + | 282 | WP_000133425.1 | hypothetical protein | - |
| C6953_RS15610 () | 2932293..2933753 | - | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| C6953_RS15615 () | 2933753..2934424 | - | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| C6953_RS15620 () | 2934592..2935962 | - | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|