MGE detailed information
MGE type: Prophage MGE length: 54831 bp
Accession: NZ_CP027550 Location: 1415134..1469964 Organism: Escherichia coli strain 2015C-4136CT1 Replicon: chromosome
Accession: NZ_CP027550 Location: 1415134..1469964 Organism: Escherichia coli strain 2015C-4136CT1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6950_RS07570 () | 1410553..1411911 | - | 1359 | WP_001357749.1 | two-component system sensor histidine kinase HprS | - |
| C6950_RS07575 () | 1411911..1412582 | - | 672 | WP_024191816.1 | response regulator transcription factor HprR | - |
| C6950_RS07580 () | 1412715..1413128 | + | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C6950_RS07585 () | 1413237..1414241 | + | 1005 | WP_000740067.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C6950_RS07590 () | 1414242..1414877 | + | 636 | WP_001240076.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C6950_RS07595 () | 1415134..1415784 | + | 651 | WP_001007792.1 | metal-binding protein ZinT | - |
| C6950_RS07605 () | 1416725..1416813 | + | 89 | Protein_1406 | YkgJ family cysteine cluster protein | - |
| C6950_RS07615 () | 1417229..1417798 | - | 570 | WP_000938107.1 | hypothetical protein | VF |
| C6950_RS26570 () | 1417852..1418763 | - | 912 | Protein_1408 | hypothetical protein | VF |
| C6950_RS07630 () | 1418927..1419058 | - | 132 | WP_095111390.1 | tail fiber assembly protein | - |
| C6950_RS07635 () | 1419084..1419371 | - | 288 | Protein_1410 | type III secretion system effector zinc metalloprotease NleC | - |
| C6950_RS07640 () | 1419405..1420385 | - | 981 | WP_000950813.1 | hypothetical protein | VF |
| C6950_RS07645 () | 1420562..1420831 | - | 270 | WP_001023459.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6950_RS07650 () | 1420833..1422146 | - | 1314 | WP_021559911.1 | ISNCY family transposase KIS | Transposase |
| C6950_RS07655 () | 1422211..1422834 | - | 624 | WP_021559912.1 | hypothetical protein | VF |
| C6950_RS07660 () | 1422903..1426379 | - | 3477 | WP_021559913.1 | host specificity protein J | - |
| C6950_RS07665 () | 1426513..1427040 | + | 528 | WP_000649829.1 | hypothetical protein | VF |
| C6950_RS07675 () | 1427231..1427863 | - | 633 | WP_072280596.1 | tail assembly protein | - |
| C6950_RS07680 () | 1427809..1428552 | - | 744 | WP_000194790.1 | C40 family peptidase | - |
| C6950_RS07685 () | 1428558..1429256 | - | 699 | WP_001357740.1 | phage minor tail protein L | - |
| C6950_RS07690 () | 1429256..1429585 | - | 330 | WP_000847304.1 | phage tail protein | - |
| C6950_RS07695 () | 1429582..1432161 | - | 2580 | WP_021559914.1 | phage tail tape measure protein | - |
| C6950_RS07700 () | 1432142..1432555 | - | 414 | WP_021559915.1 | phage tail assembly protein T | - |
| C6950_RS07705 () | 1432582..1433013 | - | 432 | WP_000479105.1 | phage minor tail protein G | - |
| C6950_RS07710 () | 1433027..1433779 | - | 753 | WP_001357739.1 | phage tail protein | - |
| C6950_RS07715 () | 1433787..1434182 | - | 396 | WP_000683066.1 | phage minor tail U family protein | - |
| C6950_RS07720 () | 1434179..1434712 | - | 534 | WP_000975046.1 | phage tail protein | - |
| C6950_RS07725 () | 1434728..1435081 | - | 354 | WP_001204549.1 | tail attachment protein | - |
| C6950_RS07730 () | 1435074..1435448 | - | 375 | WP_000201523.1 | hypothetical protein | - |
| C6950_RS07735 () | 1435499..1436527 | - | 1029 | WP_000522615.1 | major capsid protein | - |
| C6950_RS07740 () | 1436585..1436932 | - | 348 | WP_000256809.1 | head decoration protein | - |
| C6950_RS07745 () | 1436969..1438474 | - | 1506 | WP_021559916.1 | S49 family peptidase | - |
| C6950_RS07750 () | 1438464..1440056 | - | 1593 | WP_000831765.1 | phage portal protein | - |
| C6950_RS07755 () | 1440053..1440259 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| C6950_RS07760 () | 1440243..1442171 | - | 1929 | WP_021559917.1 | phage terminase large subunit family protein | - |
| C6950_RS07765 () | 1442143..1442652 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| C6950_RS07775 () | 1443055..1443279 | + | 225 | WP_001300236.1 | YlcI/YnfO family protein | - |
| C6950_RS07780 () | 1443361..1443675 | - | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| C6950_RS26575 () | 1444203..1444388 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C6950_RS07795 () | 1444610..1444723 | - | 114 | WP_000675931.1 | hypothetical protein | - |
| C6950_RS07800 () | 1444944..1445477 | - | 534 | WP_001003118.1 | lysozyme | - |
| C6950_RS07810 () | 1445637..1445909 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| C6950_RS07820 () | 1446165..1446380 | - | 216 | WP_053897820.1 | class II holin family protein | - |
| C6950_RS07830 () | 1446819..1448668 | - | 1850 | Protein_1443 | DUF1737 domain-containing protein | - |
| C6950_RS07840 () | 1448895..1449150 | - | 256 | Protein_1444 | DUF3927 family protein | - |
| C6950_RS07845 () | 1449147..1449575 | - | 429 | Protein_1445 | tellurite resistance TerB family protein | - |
| C6950_RS07870 () | 1450208..1450897 | - | 690 | WP_001064889.1 | antiterminator | - |
| C6950_RS07875 () | 1450894..1451259 | - | 366 | WP_021559919.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6950_RS07880 () | 1451260..1452318 | - | 1059 | WP_021559920.1 | DUF968 domain-containing protein | - |
| C6950_RS07885 () | 1452320..1452598 | - | 279 | WP_032155008.1 | hypothetical protein | - |
| C6950_RS07890 () | 1452766..1452921 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 1452933..1452991 | + | 59 | - | - | Antitoxin Detail |
| C6950_RS07900 () | 1453621..1454064 | + | 444 | WP_021559921.1 | acetyltransferase | - |
| C6950_RS07905 () | 1454085..1454669 | - | 585 | WP_021559922.1 | XRE family transcriptional regulator | - |
| C6950_RS07910 () | 1454855..1456093 | - | 1239 | WP_021559923.1 | IS110 family transposase ISCps4 | Transposase |
| C6950_RS07915 () | 1456409..1456831 | - | 423 | WP_021559924.1 | DUF977 family protein | - |
| C6950_RS07920 () | 1456872..1457954 | - | 1083 | WP_021559925.1 | hypothetical protein | - |
| C6950_RS07925 () | 1458026..1458451 | - | 426 | WP_000693867.1 | Rha family transcriptional regulator | - |
| C6950_RS07930 () | 1458448..1458702 | - | 255 | WP_001072337.1 | hypothetical protein | - |
| C6950_RS07935 () | 1458782..1459201 | + | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| C6950_RS07940 () | 1459500..1459655 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| C6950_RS07950 () | 1459815..1460033 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| C6950_RS07960 () | 1460606..1460827 | + | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| C6950_RS07965 () | 1460951..1463425 | + | 2475 | WP_021559926.1 | exonuclease | - |
| C6950_RS07970 () | 1463484..1463687 | + | 204 | WP_000096345.1 | DUF4224 domain-containing protein | - |
| C6950_RS07975 () | 1463687..1464712 | + | 1026 | WP_000533621.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6950_RS07985 () | 1464948..1465745 | + | 798 | WP_001339726.1 | DgsA anti-repressor MtfA | - |
| C6950_RS26805 () | 1466232..1467111 | + | 880 | Protein_1466 | Ig-like domain-containing protein | - |
| C6950_RS08005 () | 1467281..1468333 | - | 1053 | WP_000480510.1 | glycosyltransferase family 9 protein | - |
| C6950_RS08010 () | 1468648..1469964 | + | 1317 | WP_000378556.1 | shikimate transporter | - |
| C6950_RS08015 () | 1470066..1471519 | + | 1454 | Protein_1469 | AMP nucleosidase | - |
| C6950_RS08020 () | 1471862..1472578 | + | 717 | WP_000532923.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| C6950_RS08040 () | 1473207..1474850 | - | 1644 | WP_122991305.1 | toxic metabolite efflux MATE transporter YeeO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|