MGE detailed information
MGE type: Prophage MGE length: 55431 bp
Accession: NZ_CP027472 Location: 971468..1026898 Organism: Escherichia coli strain 2014C-3050 Replicon: chromosome
Accession: NZ_CP027472 Location: 971468..1026898 Organism: Escherichia coli strain 2014C-3050 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAF93_RS04990 () | 967551..968192 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| AAF93_RS04995 () | 968248..969426 | - | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AAF93_RS05000 () | 969560..969850 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| AAF93_RS05005 () | 969917..970273 | + | 357 | WP_001295500.1 | protein YebF | - |
| AAF93_RS05010 () | 970600..971259 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| AAF93_RS05015 () | 971468..973528 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| AAF93_RS05020 () | 973525..974187 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| AAF93_RS05025 () | 974211..974867 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| AAF93_RS05030 () | 974969..975199 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| AAF93_RS05035 () | 975338..975712 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| AAF93_RS05040 () | 975716..976588 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| AAF93_RS05045 () | 976601..976942 | + | 342 | WP_000976492.1 | YebY family protein | - |
| AAF93_RS05050 () | 977335..978411 | - | 1077 | WP_001189091.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| AAF93_RS05055 () | 978377..978658 | - | 282 | WP_001443927.1 | excisionase | - |
| AAF93_RS05060 () | 978765..978953 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 978769..978947 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 978769..978947 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 978769..978947 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 978769..978947 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| AAF93_RS05065 () | 978946..979140 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| AAF93_RS05070 () | 979197..980007 | - | 811 | Protein_937 | recombination protein RecT | - |
| AAF93_RS05075 () | 980000..982651 | - | 2652 | WP_000105101.1 | exodeoxyribonuclease VIII | - |
| AAF93_RS05080 () | 982750..983025 | - | 276 | WP_001307773.1 | hypothetical protein | - |
| AAF93_RS05085 () | 983099..983275 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| AAF93_RS05090 () | 983269..983490 | - | 222 | WP_000560218.1 | killing protein KilR | - |
| AAF93_RS05095 () | 983911..984063 | - | 153 | WP_001427316.1 | DUF1391 family protein | - |
| AAF93_RS05100 () | 984350..984628 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AAF93_RS05105 () | 984630..984821 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| AAF93_RS05110 () | 984842..985213 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| AAF93_RS05115 () | 985311..985613 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| AAF93_RS05120 () | 985610..986035 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| AAF93_RS05125 () | 986058..987020 | + | 963 | WP_001444941.1 | helix-turn-helix domain-containing protein | - |
| AAF93_RS05130 () | 987027..987768 | + | 742 | Protein_949 | ATP-binding protein | - |
| AAF93_RS05135 () | 987794..988555 | + | 762 | WP_000450872.1 | DUF1627 domain-containing protein | - |
| AAF93_RS05140 () | 988588..988869 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| AAF93_RS05145 () | 988866..989093 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| AAF93_RS05150 () | 989086..989397 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| AAF93_RS05155 () | 989525..989743 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| AAF93_RS05160 () | 989745..990302 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| AAF93_RS05165 () | 990593..990748 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| AAF93_RS05170 () | 990868..991212 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| AAF93_RS05175 () | 991334..991606 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| AAF93_RS05180 () | 991608..992657 | + | 1050 | WP_032284663.1 | DUF968 domain-containing protein | - |
| AAF93_RS05185 () | 992670..993044 | + | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AAF93_RS05190 () | 993041..993862 | + | 822 | WP_000762928.1 | antitermination protein | - |
| AAF93_RS05195 () | 994100..994462 | + | 363 | Protein_962 | tellurite resistance TerB family protein | - |
| AAF93_RS05200 () | 994459..994711 | + | 253 | Protein_963 | DUF3927 family protein | - |
| AAF93_RS05205 () | 995033..996883 | + | 1851 | WP_106907853.1 | SASA family carbohydrate esterase | - |
| AAF93_RS05215 () | 997322..997537 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| AAF93_RS05220 () | 997537..998034 | + | 498 | WP_000075132.1 | lysozyme RrrD | - |
| AAF93_RS05225 () | 998031..998468 | + | 438 | WP_000092325.1 | lysis protein | - |
| AAF93_RS05230 () | 998618..999235 | + | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| AAF93_RS05240 () | 999423..999617 | - | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| AAF93_RS05250 () | 999999..1000550 | + | 552 | WP_199852253.1 | terminase small subunit | - |
| AAF93_RS05255 () | 1000525..1002450 | + | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| AAF93_RS05260 () | 1002447..1002653 | + | 207 | WP_000198153.1 | gpW family protein | - |
| AAF93_RS05265 () | 1002650..1004251 | + | 1602 | WP_024026143.1 | phage portal protein | - |
| AAF93_RS05270 () | 1004232..1005552 | + | 1321 | Protein_974 | S49 family peptidase | - |
| AAF93_RS05275 () | 1005562..1005894 | + | 333 | WP_001299443.1 | head decoration protein | - |
| AAF93_RS05280 () | 1005951..1006977 | + | 1027 | Protein_976 | major capsid protein | - |
| AAF93_RS05285 () | 1007019..1007414 | + | 396 | WP_001695575.1 | DNA-packaging protein FI | - |
| AAF93_RS05290 () | 1007426..1007779 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| AAF93_RS05295 () | 1007791..1008369 | + | 579 | WP_000975096.1 | phage tail protein | - |
| AAF93_RS05300 () | 1008366..1008761 | + | 396 | WP_000683124.1 | phage minor tail U family protein | - |
| AAF93_RS05305 () | 1008769..1009521 | + | 753 | WP_032284487.1 | Ig domain-containing protein | - |
| AAF93_RS05310 () | 1009535..1009957 | + | 423 | WP_000479045.1 | phage minor tail protein G | - |
| AAF93_RS05315 () | 1009984..1010397 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| AAF93_RS05320 () | 1010378..1012990 | + | 2613 | WP_000081793.1 | phage tail tape measure protein | - |
| AAF93_RS05325 () | 1012987..1013316 | + | 330 | WP_000847280.1 | phage tail protein | - |
| AAF93_RS05330 () | 1013316..1014014 | + | 699 | WP_032284485.1 | phage minor tail protein L | - |
| AAF93_RS05335 () | 1014025..1014768 | + | 744 | WP_100038583.1 | C40 family peptidase | - |
| AAF93_RS05340 () | 1014714..1015346 | + | 633 | WP_072148784.1 | tail assembly protein | - |
| AAF93_RS05345 () | 1015592..1018984 | + | 3393 | WP_106907854.1 | host specificity protein J | - |
| AAF93_RS05350 () | 1019052..1019651 | + | 600 | WP_001230428.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| AAF93_RS05355 () | 1019716..1021029 | + | 1314 | WP_032284483.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AAF93_RS05360 () | 1021031..1021300 | + | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| AAF93_RS05365 () | 1021441..1022316 | + | 876 | WP_000491545.1 | hypothetical protein | - |
| AAF93_RS31255 () | 1022541..1023191 | - | 651 | WP_001121225.1 | type III secretion system effector NleG7 | - |
| AAF93_RS05380 () | 1023195..1023461 | - | 267 | Protein_995 | hypothetical protein | - |
| AAF93_RS05385 () | 1024146..1024802 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| AAF93_RS05390 () | 1024803..1024994 | - | 192 | WP_001296140.1 | YebW family protein | - |
| AAF93_RS05395 () | 1025099..1025335 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| AAF93_RS05400 () | 1025453..1026892 | - | 1440 | WP_000057024.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| AAF93_RS05405 () | 1026972..1029605 | - | 2634 | WP_001299674.1 | lipid-binding membrane homeostasis protein YebT | - |
| AAF93_RS05410 () | 1029574..1030857 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| AAF93_RS05415 () | 1030987..1031484 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|