MGE detailed information
MGE type: Prophage MGE length: 96496 bp
Accession: NZ_CP027472 Location: 1852759..1949254 Organism: Escherichia coli strain 2014C-3050 Replicon: chromosome
Accession: NZ_CP027472 Location: 1852759..1949254 Organism: Escherichia coli strain 2014C-3050 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAF93_RS09980 () | 1847828..1848469 | + | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
| AAF93_RS09985 () | 1848473..1849843 | + | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| AAF93_RS09990 () | 1850011..1850683 | + | 673 | Protein_1848 | two-component system response regulator PhoP | - |
| AAF93_RS09995 () | 1850683..1852143 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| AAF93_RS10000 () | 1852759..1853040 | - | 282 | WP_000133415.1 | hypothetical protein | - |
| AAF93_RS10005 () | 1853054..1854715 | - | 1662 | WP_000127884.1 | terminase large subunit | - |
| AAF93_RS10010 () | 1854699..1855055 | - | 357 | WP_000113646.1 | phage terminase small subunit P27 family | - |
| AAF93_RS31685 () | 1855178..1855360 | - | 183 | WP_000174068.1 | hypothetical protein | - |
| AAF93_RS10020 () | 1855344..1855784 | - | 441 | WP_001145906.1 | HNH endonuclease | - |
| AAF93_RS10025 () | 1855784..1856080 | - | 297 | WP_000134114.1 | head-tail connector protein | - |
| AAF93_RS10030 () | 1856077..1856415 | - | 339 | WP_001020669.1 | phage head closure protein | - |
| AAF93_RS10035 () | 1856412..1857623 | - | 1212 | WP_000267608.1 | phage portal protein | - |
| AAF93_RS10040 () | 1857625..1858197 | - | 573 | WP_000504047.1 | HK97 family phage prohead protease | - |
| AAF93_RS10045 () | 1858237..1859394 | - | 1158 | WP_001137338.1 | phage major capsid protein | - |
| AAF93_RS10050 () | 1859686..1859910 | - | 225 | WP_001132080.1 | hypothetical protein | - |
| AAF93_RS10060 () | 1860036..1860308 | - | 273 | WP_000233311.1 | PerC family transcriptional regulator | - |
| AAF93_RS10065 () | 1860321..1860731 | - | 411 | WP_000126670.1 | single-stranded DNA-binding protein | - |
| AAF93_RS31690 () | 1860741..1861046 | - | 306 | WP_001294169.1 | hypothetical protein | - |
| AAF93_RS10075 () | 1861043..1861294 | - | 252 | WP_001080642.1 | hypothetical protein | - |
| AAF93_RS10085 () | 1861497..1862894 | - | 1398 | WP_000833614.1 | helicase RepA family protein | - |
| AAF93_RS10090 () | 1862891..1863190 | - | 300 | WP_000770163.1 | DUF4222 domain-containing protein | - |
| AAF93_RS10095 () | 1863196..1863429 | - | 234 | WP_001204967.1 | hypothetical protein | - |
| AAF93_RS10100 () | 1863431..1863652 | - | 222 | WP_001204070.1 | hypothetical protein | - |
| AAF93_RS10105 () | 1863645..1864010 | - | 366 | WP_000551751.1 | hypothetical protein | - |
| AAF93_RS10110 () | 1864003..1864227 | - | 225 | WP_000336141.1 | hypothetical protein | - |
| AAF93_RS10115 () | 1864217..1864447 | - | 231 | WP_000076671.1 | hypothetical protein | - |
| AAF93_RS10120 () | 1864444..1865721 | - | 1278 | WP_001502337.1 | host cell division inhibitor Icd-like protein | - |
| AAF93_RS10125 () | 1865774..1865962 | - | 189 | WP_000953274.1 | AlpA family transcriptional regulator | - |
| AAF93_RS10130 () | 1866327..1867556 | - | 1230 | WP_000085269.1 | site-specific integrase | - |
| AAF93_RS10135 () | 1867805..1868926 | + | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| AAF93_RS10140 () | 1869072..1870301 | - | 1230 | WP_000359438.1 | peptidase T | - |
| AAF93_RS10150 () | 1870551..1871687 | + | 1137 | WP_000531601.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| AAF93_RS10155 () | 1871671..1872534 | + | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| AAF93_RS10165 () | 1872808..1873398 | - | 591 | WP_001132165.1 | bfpT-regulated chaperone | - |
| AAF93_RS10170 () | 1873581..1874231 | + | 651 | WP_001144080.1 | T3SS effector NleG family protein | - |
| AAF93_RS10175 () | 1874306..1875364 | + | 1059 | WP_001299273.1 | T3SS effector EspW | - |
| AAF93_RS10180 () | 1875492..1876127 | - | 636 | WP_012816780.1 | DUF1076 domain-containing protein | - |
| AAF93_RS10185 () | 1876195..1876776 | - | 582 | WP_001118085.1 | T3SS effector NleG family protein | - |
| AAF93_RS10190 () | 1877067..1877642 | - | 576 | WP_001131642.1 | DUF1076 domain-containing protein | - |
| AAF93_RS10195 () | 1877756..1878025 | - | 270 | WP_101946255.1 | phage tail fiber C-terminal domain-containing protein | - |
| AAF93_RS10200 () | 1878027..1879339 | - | 1313 | Protein_1886 | prophage tail fiber N-terminal domain-containing protein | - |
| AAF93_RS10205 () | 1879405..1880028 | - | 624 | WP_001216290.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| AAF93_RS10210 () | 1880097..1883573 | - | 3477 | WP_106907865.1 | host specificity protein J | - |
| AAF93_RS10215 () | 1883916..1884548 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| AAF93_RS10220 () | 1884494..1885237 | - | 744 | WP_000194723.1 | C40 family peptidase | - |
| AAF93_RS10225 () | 1885248..1885946 | - | 699 | WP_001335877.1 | phage minor tail protein L | - |
| AAF93_RS10230 () | 1885946..1886287 | - | 342 | WP_000807940.1 | phage tail protein | - |
| AAF93_RS10235 () | 1886280..1888296 | - | 2017 | Protein_1893 | phage tail tape measure protein | - |
| AAF93_RS31695 () | 1888828..1889175 | - | 348 | Protein_1894 | tape measure protein | - |
| AAF93_RS31700 () | 1889268..1889519 | - | 252 | WP_199852254.1 | phage tail tape measure protein | - |
| AAF93_RS10245 () | 1889567..1889775 | - | 209 | Protein_1896 | DUF4035 domain-containing protein | - |
| AAF93_RS10250 () | 1889870..1890244 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| AAF93_RS10255 () | 1890259..1890975 | - | 717 | WP_058157545.1 | immunoglobulin domain-containing protein | - |
| AAF93_RS10260 () | 1891041..1891385 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| AAF93_RS10265 () | 1891382..1891828 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| AAF93_RS10270 () | 1891825..1892175 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| AAF93_RS10275 () | 1892186..1892512 | - | 327 | WP_000125984.1 | head-tail connector protein | - |
| AAF93_RS10280 () | 1892509..1895094 | - | 2586 | Protein_1903 | phage portal protein | - |
| AAF93_RS10285 () | 1895040..1895261 | - | 222 | WP_001063025.1 | hypothetical protein | - |
| AAF93_RS10290 () | 1895306..1897243 | - | 1938 | WP_000173079.1 | phage major capsid protein | - |
| AAF93_RS10295 () | 1897307..1898968 | - | 1662 | WP_106907866.1 | terminase large subunit | - |
| AAF93_RS10300 () | 1898965..1899528 | - | 564 | WP_000958380.1 | terminase small subunit | - |
| AAF93_RS10310 () | 1899822..1900187 | - | 366 | WP_001427183.1 | HNH endonuclease | - |
| AAF93_RS10315 () | 1900229..1900456 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| AAF93_RS10320 () | 1900825..1901049 | - | 225 | WP_000736096.1 | hypothetical protein | - |
| AAF93_RS10325 () | 1901046..1901540 | - | 495 | WP_001427182.1 | lysis protein | - |
| AAF93_RS10330 () | 1901542..1901628 | - | 87 | WP_032140280.1 | hypothetical protein | - |
| AAF93_RS10340 () | 1902183..1902716 | - | 534 | WP_001003120.1 | lysozyme | - |
| AAF93_RS10350 () | 1902876..1903148 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| AAF93_RS10360 () | 1903405..1903620 | - | 216 | WP_024182511.1 | class II holin family protein | - |
| AAF93_RS10370 () | 1904059..1905908 | - | 1850 | Protein_1916 | DUF1737 domain-containing protein | - |
| AAF93_RS10395 () | 1906676..1907389 | - | 714 | WP_000261909.1 | helix-turn-helix domain-containing protein | - |
| AAF93_RS10400 () | 1907527..1907723 | - | 197 | Protein_1918 | TrmB family transcriptional regulator | - |
| AAF93_RS10405 () | 1908010..1908828 | - | 819 | WP_000265267.1 | CPBP family intramembrane metalloprotease | - |
| AAF93_RS10410 () | 1908980..1909351 | - | 372 | WP_000090264.1 | antitermination protein | - |
| AAF93_RS10415 () | 1909341..1909712 | - | 372 | WP_001217436.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AAF93_RS10420 () | 1909725..1910774 | - | 1050 | WP_001265140.1 | DUF968 domain-containing protein | - |
| AAF93_RS10425 () | 1910776..1911054 | - | 279 | WP_001341388.1 | hypothetical protein | - |
| AAF93_RS10430 () | 1911222..1911377 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AAF93_RS10435 () | 1911982..1912755 | + | 774 | WP_106907867.1 | alpha/beta hydrolase | - |
| AAF93_RS10440 () | 1913107..1913520 | - | 414 | WP_001151233.1 | DUF977 family protein | - |
| AAF93_RS10445 () | 1913536..1914306 | - | 771 | WP_000450992.1 | DUF1627 domain-containing protein | - |
| AAF93_RS10450 () | 1914328..1915074 | - | 747 | WP_000788758.1 | ATP-binding protein | - |
| AAF93_RS10455 () | 1915081..1916172 | - | 1092 | WP_096850689.1 | DNA-binding protein | - |
| AAF93_RS10460 () | 1916251..1916706 | + | 456 | WP_000273724.1 | hypothetical protein | - |
| AAF93_RS10465 () | 1916912..1917337 | - | 426 | WP_000693855.1 | Rha family transcriptional regulator | - |
| AAF93_RS10470 () | 1917321..1917593 | - | 273 | WP_000887453.1 | helix-turn-helix domain-containing protein | - |
| AAF93_RS10475 () | 1917702..1918103 | + | 402 | WP_000986592.1 | helix-turn-helix domain-containing protein | - |
| AAF93_RS10480 () | 1918131..1918322 | + | 192 | WP_000536233.1 | hypothetical protein | Antitoxin Detail |
| AAF93_RS10485 () | 1918322..1918609 | + | 288 | WP_001303876.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AAF93_RS10490 () | 1918886..1919041 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| AAF93_RS10500 () | 1919183..1919572 | + | 390 | WP_000394511.1 | hypothetical protein | - |
| AAF93_RS10505 () | 1919759..1919944 | - | 186 | WP_001133046.1 | hypothetical protein | - |
| AAF93_RS10515 () | 1920518..1920706 | + | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| AAF93_RS10520 () | 1920703..1920894 | + | 192 | WP_001098307.1 | DUF1482 family protein | - |
| AAF93_RS10525 () | 1920988..1923459 | + | 2472 | WP_032278809.1 | exonuclease | - |
| AAF93_RS10530 () | 1923527..1923769 | + | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| AAF93_RS10535 () | 1923747..1924766 | + | 1020 | WP_001299351.1 | tyrosine-type recombinase/integrase | - |
| AAF93_RS10540 () | 1924908..1925012 | - | 105 | Protein_1944 | DUF1737 domain-containing protein | - |
| AAF93_RS10545 () | 1925331..1925586 | - | 256 | Protein_1945 | DUF3927 family protein | - |
| AAF93_RS10550 () | 1925583..1926014 | - | 432 | WP_001427258.1 | tellurite resistance TerB family protein | - |
| AAF93_RS10565 () | 1926580..1927401 | - | 822 | WP_000762928.1 | antitermination protein | - |
| AAF93_RS10570 () | 1927398..1927772 | - | 375 | WP_001217410.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AAF93_RS10575 () | 1927785..1928834 | - | 1050 | WP_106875428.1 | DUF968 domain-containing protein | - |
| AAF93_RS10580 () | 1928836..1929108 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| AAF93_RS10585 () | 1929230..1929574 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| AAF93_RS10590 () | 1929694..1929849 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| AAF93_RS10595 () | 1930140..1930697 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| AAF93_RS10600 () | 1930699..1930917 | - | 219 | WP_000683607.1 | DUF4014 family protein | - |
| AAF93_RS10605 () | 1931020..1931355 | - | 336 | WP_001365112.1 | hypothetical protein | - |
| AAF93_RS10610 () | 1931348..1931575 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| AAF93_RS10615 () | 1931572..1931853 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| AAF93_RS10620 () | 1931886..1932647 | - | 762 | WP_032284689.1 | DUF1627 domain-containing protein | - |
| AAF93_RS10625 () | 1932669..1933415 | - | 747 | WP_000788750.1 | ATP-binding protein | - |
| AAF93_RS10630 () | 1933422..1934492 | - | 1071 | WP_001262374.1 | hypothetical protein | - |
| AAF93_RS10635 () | 1934564..1934989 | - | 426 | WP_000693928.1 | Rha family transcriptional regulator | - |
| AAF93_RS10640 () | 1934973..1935296 | - | 324 | WP_000711018.1 | transcriptional regulator | - |
| AAF93_RS10645 () | 1935421..1935897 | + | 477 | WP_000948454.1 | hypothetical protein | - |
| AAF93_RS10650 () | 1936216..1936368 | + | 153 | WP_000379610.1 | DUF1391 family protein | - |
| AAF93_RS10660 () | 1936858..1937046 | + | 189 | WP_001358566.1 | cell division inhibition protein DicB | - |
| AAF93_RS10665 () | 1937043..1937234 | + | 192 | WP_001365098.1 | lysis protein YdfD | - |
| AAF93_RS10670 () | 1937328..1939800 | + | 2473 | Protein_1967 | 3'-5' exoribonuclease | - |
| AAF93_RS10675 () | 1939862..1940131 | + | 270 | WP_000003742.1 | excisionase | - |
| AAF93_RS10680 () | 1940100..1941218 | + | 1119 | WP_000074973.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| AAF93_RS10685 () | 1941295..1941639 | - | 345 | WP_001427255.1 | DUF2335 domain-containing protein | - |
| AAF93_RS10690 () | 1941740..1941943 | - | 204 | WP_000824186.1 | hypothetical protein | - |
| AAF93_RS10695 () | 1942252..1943046 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| AAF93_RS10700 () | 1943043..1944089 | + | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| AAF93_RS10705 () | 1944147..1944608 | + | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| AAF93_RS10710 () | 1944605..1945393 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| AAF93_RS10715 () | 1945532..1946353 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| AAF93_RS10720 () | 1946369..1947280 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| AAF93_RS10725 () | 1947309..1948553 | - | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| AAF93_RS10730 () | 1948553..1949254 | - | 702 | WP_001033694.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| AAF93_RS10735 () | 1949247..1950446 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| AAF93_RS10740 () | 1950708..1951781 | + | 1074 | WP_000810250.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|