MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 125059 bp
Accession: NZ_CP027463 Location: 1..125059 Organism: Escherichia coli isolate 07-4299 Replicon: plasmid unnamed
Accession: NZ_CP027463 Location: 1..125059 Organism: Escherichia coli isolate 07-4299 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W75_RS26125 () | 107..175 | + | 69 | Protein_0 | pilus protein | - |
| C6W75_RS26130 () | 175..528 | - | 354 | WP_072121439.1 | hypothetical protein | - |
| C6W75_RS25055 () | 491..682 | - | 192 | WP_001027514.1 | hypothetical protein | - |
| C6W75_RS25060 () | 682..1101 | - | 420 | WP_000271712.1 | DUF1380 family protein | - |
| C6W75_RS25065 () | 1148..1450 | - | 303 | WP_072148062.1 | antirestriction protein | - |
| C6W75_RS25985 () | 1990..2805 | - | 816 | WP_137514984.1 | hypothetical protein | - |
| C6W75_RS25080 () | 2805..3239 | - | 435 | WP_028131357.1 | DUF1380 family protein | - |
| C6W75_RS25085 () | 3251..3472 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| C6W75_RS25090 () | 3473..4156 | - | 684 | WP_106912562.1 | DNA methylase | - |
| C6W75_RS25095 () | 4232..4537 | - | 306 | WP_096133033.1 | hypothetical protein | - |
| C6W75_RS25100 () | 4541..5443 | - | 903 | WP_106912563.1 | DUF1281 domain-containing protein | - |
| C6W75_RS25105 () | 5520..7244 | - | 1725 | Protein_11 | group II intron reverse transcriptase/maturase | - |
| C6W75_RS25125 () | 8265..8513 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| C6W75_RS25130 () | 8510..8947 | + | 438 | WP_106912564.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6W75_RS25135 () | 8947..10220 | + | 1274 | Protein_14 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C6W75_RS25145 () | 10222..10638 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| C6W75_RS25150 () | 10631..11611 | - | 981 | WP_106912565.1 | plasmid segregation protein ParM | - |
| C6W75_RS25155 () | 12025..12333 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| C6W75_RS25160 () | 12420..13064 | - | 645 | WP_001144036.1 | ParA family protein | - |
| C6W75_RS25165 () | 13245..14051 | - | 807 | WP_040116953.1 | site-specific integrase | - |
| C6W75_RS25170 () | 14052..14357 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C6W75_RS25175 () | 14359..14577 | - | 219 | WP_038355956.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C6W75_RS25180 () | 15173..15433 | + | 261 | WP_000343102.1 | hypothetical protein | - |
| C6W75_RS25185 () | 15430..16020 | + | 591 | WP_106912566.1 | hypothetical protein | - |
| C6W75_RS25190 () | 16038..16385 | - | 348 | WP_033817147.1 | hypothetical protein | - |
| C6W75_RS25200 () | 16514..16849 | + | 336 | WP_021292998.1 | colicin transporter | - |
| C6W75_RS25205 () | 16856..17226 | - | 371 | Protein_26 | colicin | - |
| C6W75_RS25210 () | 17286..18017 | - | 732 | WP_000850413.1 | complement resistance protein TraT | - |
| C6W75_RS26135 () | 18294..18404 | - | 111 | Protein_28 | IS481 family transposase | - |
| C6W75_RS26140 () | 18408..18622 | - | 215 | Protein_29 | hypothetical protein | - |
| C6W75_RS25230 () | 19188..20165 | + | 978 | WP_001369978.1 | RepB family plasmid replication initiator protein | - |
| C6W75_RS25235 () | 20404..20686 | - | 283 | Protein_31 | ISL3 family transposase ISEc53 | Transposase |
| C6W75_RS25240 () | 20843..21073 | - | 231 | WP_040118372.1 | hypothetical protein | - |
| C6W75_RS25250 () | 22526..23020 | - | 495 | WP_021293003.1 | Transcriptional repressor MprA | VF |
| C6W75_RS25255 () | 23141..24580 | - | 1440 | WP_021293303.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6W75_RS25260 () | 24584..26704 | - | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6W75_RS25265 () | 26754..29750 | - | 2997 | WP_047082204.1 | Hemolysin, chromosomal | VF |
| C6W75_RS25270 () | 29752..30267 | - | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| C6W75_RS25280 () | 30695..31498 | - | 804 | WP_000899428.1 | Outer membrane protein A | VF |
| C6W75_RS25285 () | 31523..35851 | - | 4329 | WP_024199654.1 | Autotransporter adhesin SadA | VF |
| C6W75_RS25290 () | 35868..36149 | - | 282 | WP_040118374.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C6W75_RS25295 () | 37245..38801 | + | 1557 | WP_040118375.1 | L-lactate permease | - |
| C6W75_RS25300 () | 38852..39571 | + | 720 | WP_001102093.1 | (Fe-S)-binding protein | - |
| C6W75_RS25305 () | 39582..40997 | + | 1416 | WP_000054160.1 | iron-sulfur cluster-binding protein | - |
| C6W75_RS25310 () | 41002..41700 | + | 699 | WP_021293086.1 | lactate utilization protein C | - |
| C6W75_RS25320 () | 42044..42508 | - | 465 | WP_106912568.1 | IS3 family transposase ISKpn8 | Transposase |
| C6W75_RS25325 () | 42624..42923 | - | 300 | WP_040116983.1 | hypothetical protein | - |
| C6W75_RS25330 () | 42951..43142 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| C6W75_RS25335 () | 43152..43517 | - | 366 | WP_106912569.1 | hypothetical protein | - |
| C6W75_RS25345 () | 43651..43860 | + | 210 | WP_000855713.1 | hypothetical protein | - |
| C6W75_RS25350 () | 44023..48102 | - | 4080 | WP_106912570.1 | Serine protease SepA autotransporter | VF |
| C6W75_RS25355 () | 48777..49702 | - | 926 | Protein_52 | IS3 family transposase | - |
| C6W75_RS26145 () | 49769..49858 | - | 90 | Protein_53 | transposase | - |
| C6W75_RS25360 () | 50104..51486 | + | 1383 | WP_106912571.1 | Adhesin YadA | VF |
| C6W75_RS25365 () | 51699..51985 | + | 287 | Protein_55 | IS3 family transposase | - |
| C6W75_RS25370 () | 52189..52368 | + | 180 | Protein_56 | integrase core domain-containing protein | - |
| C6W75_RS25380 () | 52676..54763 | + | 2088 | WP_001367773.1 | bifunctional siderophore receptor/adhesin Iha | - |
| C6W75_RS25385 () | 55024..55446 | - | 423 | WP_050866392.1 | Exc2 family lipoprotein | - |
| C6W75_RS25390 () | 55729..56244 | + | 516 | Protein_59 | IS91 family transposase IS91 | Transposase |
| C6W75_RS25395 () | 56575..56814 | - | 240 | WP_000859018.1 | MarR family transcriptional regulator | - |
| C6W75_RS25415 () | 57784..58815 | - | 1032 | WP_106912572.1 | replication initiation protein | - |
| C6W75_RS25430 () | 59518..60204 | + | 687 | WP_106912574.1 | transcription termination factor NusG | - |
| C6W75_RS25435 () | 60429..62402 | + | 1974 | WP_106912575.1 | Hemin receptor | VF |
| C6W75_RS25440 () | 62421..63212 | + | 792 | WP_106912576.1 | DUF4198 domain-containing protein | - |
| C6W75_RS25445 () | 63534..64199 | + | 666 | WP_106912577.1 | traC | - |
| C6W75_RS25455 () | 64466..65086 | + | 621 | WP_000176497.1 | DUF1449 family protein | - |
| C6W75_RS25460 () | 65113..66807 | + | 1695 | WP_000482663.1 | flotillin family protein | - |
| C6W75_RS25465 () | 66888..67130 | + | 243 | WP_047086880.1 | PilI type IV pilus biogenesis protein | - |
| C6W75_RS25475 () | 67738..68808 | + | 1071 | WP_106912578.1 | hypothetical protein | VF |
| C6W75_RS25480 () | 68813..69250 | + | 438 | WP_106912579.1 | type IV pilus biogenesis protein PilM | - |
| C6W75_RS25485 () | 69281..70900 | + | 1620 | WP_106912580.1 | Outer membrane lipoprotein BfpB | VF |
| C6W75_RS25490 () | 70921..72216 | + | 1296 | WP_106912581.1 | type 4b pilus protein PilO2 | - |
| C6W75_RS25495 () | 72206..72658 | + | 453 | WP_106912582.1 | type IV pilus biogenesis protein PilP | - |
| C6W75_RS25500 () | 72743..74251 | + | 1509 | WP_106912583.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| C6W75_RS25505 () | 74253..75353 | + | 1101 | WP_001563249.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| C6W75_RS25510 () | 75427..75963 | + | 537 | WP_040118365.1 | cleavage protein | - |
| C6W75_RS25515 () | 76017..76490 | + | 474 | WP_000870986.1 | hypothetical protein | VF |
| C6W75_RS25520 () | 76509..77144 | + | 636 | WP_000478595.1 | prepilin peptidase | - |
| C6W75_RS25525 () | 77149..78513 | + | 1365 | WP_106912584.1 | hypothetical protein | VF |
| C6W75_RS25535 () | 78751..79056 | - | 306 | WP_106912585.1 | hypothetical protein | - |
| C6W75_RS25540 () | 79098..80267 | - | 1170 | WP_106912586.1 | site-specific integrase | - |
| C6W75_RS25545 () | 80433..80753 | - | 321 | WP_000695052.1 | hypothetical protein | - |
| C6W75_RS25550 () | 81013..81834 | + | 822 | WP_032326948.1 | hypothetical protein | - |
| C6W75_RS25555 () | 81924..83126 | + | 1203 | WP_106912587.1 | conjugal transfer protein TraF | - |
| C6W75_RS25560 () | 83485..83937 | + | 453 | WP_001081199.1 | DotD/TraH family lipoprotein | - |
| C6W75_RS25565 () | 83934..84770 | + | 837 | WP_000848138.1 | hypothetical protein | VF |
| C6W75_RS25570 () | 84754..85902 | + | 1149 | WP_000625247.1 | putative protein YggR | VF |
| C6W75_RS25575 () | 85899..86189 | + | 291 | WP_000817799.1 | hypothetical protein | - |
| C6W75_RS25580 () | 86253..90263 | + | 4011 | WP_106912588.1 | DNA primase | - |
| C6W75_RS25585 () | 90280..90630 | + | 351 | WP_033811932.1 | hypothetical protein | - |
| C6W75_RS25590 () | 90642..91337 | + | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| C6W75_RS25595 () | 91348..92322 | + | 975 | WP_001165562.1 | hypothetical protein | VF |
| C6W75_RS25600 () | 92326..93657 | + | 1332 | WP_009453278.1 | conjugal transfer protein TraO | - |
| C6W75_RS25605 () | 93654..94367 | + | 714 | WP_106912589.1 | conjugal transfer protein TraP | - |
| C6W75_RS25610 () | 94367..94894 | + | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| C6W75_RS25615 () | 94943..95341 | + | 399 | WP_000086069.1 | hypothetical protein | - |
| C6W75_RS25620 () | 95398..95649 | + | 252 | WP_001277575.1 | hypothetical protein | - |
| C6W75_RS25625 () | 95564..96382 | + | 819 | WP_072094468.1 | conjugal transfer protein TraT | - |
| C6W75_RS25630 () | 96437..96796 | + | 360 | WP_000380400.1 | hypothetical protein | - |
| C6W75_RS25635 () | 96796..97176 | + | 381 | WP_000690886.1 | hypothetical protein | - |
| C6W75_RS25640 () | 97352..100396 | + | 3045 | WP_021552467.1 | hypothetical protein | - |
| C6W75_RS25645 () | 100396..101013 | + | 618 | WP_000286857.1 | hypothetical protein | - |
| C6W75_RS25650 () | 100974..102179 | + | 1206 | WP_001189539.1 | conjugal transfer protein TraW | - |
| C6W75_RS25655 () | 102176..102745 | + | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| C6W75_RS25660 () | 102818..104977 | + | 2160 | WP_106912590.1 | DotA/TraY family protein | - |
| C6W75_RS25665 () | 105065..105712 | + | 648 | WP_048239464.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C6W75_RS25670 () | 105868..106029 | + | 162 | WP_001138649.1 | hypothetical protein | - |
| C6W75_RS25675 () | 106026..106178 | - | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| C6W75_RS25680 () | 106511..106753 | + | 243 | WP_001398505.1 | hypothetical protein | - |
| C6W75_RS25685 () | 106846..108381 | - | 1536 | WP_001367813.1 | phosphoethanolamine transferase | - |
| C6W75_RS25690 () | 108582..109037 | - | 456 | WP_048239467.1 | DUF2569 family protein | - |
| C6W75_RS25695 () | 109125..109748 | - | 624 | WP_106912591.1 | DNA-binding protein | - |
| C6W75_RS25700 () | 109907..110374 | + | 468 | WP_106912592.1 | thermonuclease family protein | - |
| C6W75_RS25705 () | 110775..114866 | + | 4092 | WP_137514982.1 | Serine protease SepA autotransporter | VF |
| C6W75_RS25715 () | 115373..115738 | + | 366 | WP_001379349.1 | hypothetical protein | - |
| C6W75_RS25720 () | 115748..115939 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| C6W75_RS25725 () | 115967..116278 | + | 312 | WP_044804120.1 | hypothetical protein | - |
| C6W75_RS25740 () | 117063..118334 | + | 1272 | WP_106912594.1 | IncI1-type conjugal transfer protein TrbA | - |
| C6W75_RS25745 () | 118331..119449 | + | 1119 | WP_106912595.1 | DsbC family protein | - |
| C6W75_RS25750 () | 119430..121730 | + | 2301 | WP_106912596.1 | TraM recognition domain-containing protein | - |
| C6W75_RS25755 () | 121951..124671 | - | 2721 | WP_106912597.1 | Protein TraI | Relaxase |
| C6W75_RS25760 () | 124683..125015 | - | 333 | WP_001291056.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|