MGE detailed information
MGE type: Prophage MGE length: 57554 bp
Accession: NZ_CP027462 Location: 4257991..4315544 Organism: Escherichia coli isolate 07-4299 Replicon: chromosome
Accession: NZ_CP027462 Location: 4257991..4315544 Organism: Escherichia coli isolate 07-4299 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W75_RS22030 () | 4253046..4253462 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| C6W75_RS22035 () | 4253573..4254286 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| C6W75_RS26110 () | 4254688..4255191 | + | 504 | WP_001027717.1 | hypothetical protein | - |
| C6W75_RS22045 () | 4255413..4256606 | - | 1194 | WP_000486996.1 | aromatic amino acid transaminase | - |
| C6W75_RS22050 () | 4256859..4257938 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| C6W75_RS22055 () | 4257991..4259406 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| C6W75_RS22060 () | 4259489..4260472 | + | 984 | WP_000235522.1 | L-threonine 3-dehydrogenase | VF |
| C6W75_RS22065 () | 4260638..4260880 | - | 243 | WP_000891389.1 | envelope stress response protein PspG | - |
| C6W75_RS22070 () | 4261014..4262051 | - | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| C6W75_RS22075 () | 4262140..4263237 | + | 1098 | WP_000332263.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6W75_RS22080 () | 4263299..4263547 | + | 249 | WP_001217556.1 | DinI family protein | - |
| C6W75_RS22085 () | 4263818..4264489 | - | 672 | WP_033802776.1 | DUF4376 domain-containing protein | - |
| C6W75_RS22090 () | 4264558..4265745 | - | 1188 | WP_044687098.1 | ISNCY family transposase KIS | Transposase |
| C6W75_RS22095 () | 4265890..4266030 | - | 141 | WP_000078855.1 | Hok/Gef family protein | - |
| C6W75_RS22100 () | 4266229..4269915 | - | 3687 | WP_033802778.1 | DUF1983 domain-containing protein | - |
| C6W75_RS22105 () | 4270851..4271483 | - | 633 | WP_136868121.1 | tail assembly protein | - |
| C6W75_RS22110 () | 4271429..4272172 | - | 744 | WP_033802780.1 | C40 family peptidase | - |
| C6W75_RS22115 () | 4272183..4272881 | - | 699 | WP_001499019.1 | phage minor tail protein L | - |
| C6W75_RS22120 () | 4272881..4273210 | - | 330 | WP_000847279.1 | phage tail protein | - |
| C6W75_RS22125 () | 4273207..4275780 | - | 2574 | WP_106912548.1 | phage tail tape measure protein | - |
| C6W75_RS22130 () | 4275761..4276174 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| C6W75_RS22135 () | 4276201..4276632 | - | 432 | WP_000479116.1 | phage minor tail protein G | - |
| C6W75_RS22140 () | 4276646..4277398 | - | 753 | WP_000235046.1 | phage tail protein | - |
| C6W75_RS22145 () | 4277406..4277801 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| C6W75_RS22150 () | 4277798..4278373 | - | 576 | WP_024213759.1 | phage tail protein | - |
| C6W75_RS22155 () | 4278389..4278742 | - | 354 | WP_001204554.1 | tail attachment protein | - |
| C6W75_RS22160 () | 4278735..4279118 | - | 384 | WP_000201501.1 | DNA-packaging protein FI | - |
| C6W75_RS22165 () | 4279170..4280198 | - | 1029 | WP_000522591.1 | major capsid protein | - |
| C6W75_RS22170 () | 4280256..4280603 | - | 348 | WP_000256823.1 | head decoration protein | - |
| C6W75_RS22175 () | 4280640..4282145 | - | 1506 | WP_001253979.1 | S49 family peptidase | - |
| C6W75_RS22180 () | 4282135..4283727 | - | 1593 | WP_024174188.1 | phage portal protein | - |
| C6W75_RS22185 () | 4283724..4283930 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| C6W75_RS22190 () | 4283914..4285842 | - | 1929 | WP_106912549.1 | phage terminase large subunit family protein | - |
| C6W75_RS22195 () | 4285814..4286323 | - | 510 | WP_106912550.1 | terminase small subunit | - |
| C6W75_RS22205 () | 4287000..4287542 | - | 543 | WP_001109015.1 | Rha family transcriptional regulator | - |
| C6W75_RS22210 () | 4287745..4288182 | - | 438 | WP_032209690.1 | lysis protein | - |
| C6W75_RS25965 () | 4288185..4288334 | - | 150 | WP_032209664.1 | hypothetical protein | - |
| C6W75_RS22215 () | 4288334..4288900 | - | 567 | WP_032209662.1 | antirepressor | - |
| C6W75_RS22220 () | 4289174..4289707 | - | 534 | WP_032209661.1 | lysozyme | - |
| C6W75_RS22225 () | 4289712..4289927 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| C6W75_RS22235 () | 4290422..4292386 | - | 1965 | WP_106912551.1 | SASA family carbohydrate esterase | - |
| C6W75_RS22240 () | 4292630..4292953 | + | 324 | WP_047083933.1 | anti-adapter protein IraM | - |
| C6W75_RS22245 () | 4293251..4293520 | - | 270 | WP_000738072.1 | hypothetical protein | VF |
| C6W75_RS22250 () | 4293532..4294491 | - | 960 | WP_001365678.1 | hypothetical protein | VF |
| C6W75_RS22270 () | 4294874..4295932 | - | 1059 | WP_000483494.1 | site-specific DNA-methyltransferase | - |
| C6W75_RS22275 () | 4296083..4296280 | - | 198 | WP_000917735.1 | hypothetical protein | - |
| C6W75_RS22280 () | 4296496..4296876 | - | 381 | WP_001204806.1 | antitermination protein Q | - |
| C6W75_RS22285 () | 4296894..4297883 | - | 990 | WP_106912552.1 | DUF968 domain-containing protein | - |
| C6W75_RS22290 () | 4297891..4298700 | - | 810 | WP_001061438.1 | KilA-N domain-containing protein | - |
| C6W75_RS22295 () | 4298720..4299109 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6W75_RS22300 () | 4299106..4299432 | - | 327 | WP_000210156.1 | LexA family transcriptional regulator | - |
| C6W75_RS22305 () | 4299429..4300082 | - | 654 | WP_052904510.1 | phage N-6-adenine-methyltransferase | - |
| C6W75_RS22310 () | 4300082..4300576 | - | 495 | Protein_4089 | PerC family transcriptional regulator | - |
| C6W75_RS22315 () | 4300573..4301391 | - | 819 | WP_000061523.1 | helix-turn-helix domain-containing protein | - |
| C6W75_RS22320 () | 4301388..4301612 | - | 225 | WP_000620696.1 | hypothetical protein | - |
| C6W75_RS22325 () | 4301609..4302772 | - | 1164 | WP_106912553.1 | Rha family phage regulatory protein | - |
| C6W75_RS22330 () | 4302769..4303320 | - | 552 | WP_106912554.1 | hypothetical protein | - |
| C6W75_RS22335 () | 4303313..4303573 | - | 261 | WP_001191680.1 | helix-turn-helix transcriptional regulator | - |
| C6W75_RS22345 () | 4303671..4304363 | + | 693 | WP_001020631.1 | helix-turn-helix transcriptional regulator | - |
| C6W75_RS22360 () | 4305065..4305427 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| C6W75_RS22365 () | 4305493..4306317 | + | 825 | WP_000081316.1 | DUF2303 family protein | - |
| C6W75_RS22370 () | 4306445..4306981 | + | 537 | WP_000008232.1 | 5'-deoxynucleotidase | - |
| C6W75_RS22375 () | 4306972..4307334 | + | 363 | WP_001242725.1 | hypothetical protein | - |
| C6W75_RS22380 () | 4307334..4308143 | + | 810 | WP_000206746.1 | hypothetical protein | - |
| C6W75_RS22385 () | 4308143..4308715 | + | 573 | WP_001061343.1 | 3'-5' exoribonuclease | - |
| C6W75_RS22390 () | 4308752..4309024 | + | 273 | WP_001093911.1 | pyocin activator PrtN family protein | - |
| C6W75_RS22395 () | 4309058..4309606 | - | 549 | WP_000089360.1 | hypothetical protein | Toxin Detail |
| C6W75_RS22400 () | 4309629..4310102 | - | 474 | WP_000287252.1 | SocA family protein | Antitoxin Detail |
| C6W75_RS22405 () | 4310390..4310512 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| C6W75_RS22410 () | 4310875..4311860 | - | 986 | Protein_4106 | DUF2713 domain-containing protein | - |
| C6W75_RS22420 () | 4312178..4312693 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| C6W75_RS22425 () | 4312735..4312944 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| C6W75_RS22430 () | 4313060..4314385 | - | 1326 | WP_001301116.1 | MATE family efflux transporter DinF | - |
| C6W75_RS22435 () | 4314458..4315066 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| C6W75_RS22440 () | 4315176..4315544 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| C6W75_RS22445 () | 4315715..4318138 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| C6W75_RS22450 () | 4318293..4319165 | - | 873 | WP_000455228.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| C6W75_RS22455 () | 4319178..4319675 | - | 498 | WP_001297295.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|