MGE detailed information
MGE type: Genomic_island MGE length: 21198 bp
Accession: NZ_CP027461 Location: 387849..409046 Organism: Escherichia coli strain 95-3322 Replicon: chromosome
Accession: NZ_CP027461 Location: 387849..409046 Organism: Escherichia coli strain 95-3322 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W78_RS01935 () | 383968..384393 | - | 426 | WP_000946069.1 | type VI secretion system baseplate subunit TssE | - |
| C6W78_RS01940 () | 384398..385882 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| C6W78_RS01945 () | 385905..386408 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| C6W78_RS01950 () | 387110..387628 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| C6W78_RS01955 () | 387849..389831 | + | 1983 | WP_042020804.1 | hypothetical protein | VF |
| C6W78_RS01960 () | 389938..390984 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| C6W78_RS01965 () | 390977..392416 | + | 1440 | WP_042020802.1 | DUF4150 domain-containing protein | - |
| C6W78_RS01970 () | 392391..392681 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| C6W78_RS01975 () | 392939..393703 | + | 765 | Protein_364 | ISAs1 family transposase ISEc1 | Transposase |
| C6W78_RS01980 () | 393932..394435 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| C6W78_RS01985 () | 394529..395017 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| C6W78_RS01990 () | 395043..395237 | + | 195 | Protein_367 | ISAs1 family transposase | - |
| C6W78_RS01995 () | 395288..396058 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| C6W78_RS02000 () | 396239..396685 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| C6W78_RS02005 () | 396728..399172 | - | 2445 | WP_000973131.1 | hypothetical protein | VF |
| C6W78_RS02010 () | 399412..399990 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
| C6W78_RS02015 () | 400195..400962 | + | 768 | WP_001468560.1 | class II glutamine amidotransferase | - |
| C6W78_RS02020 () | 400933..401673 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C6W78_RS02025 () | 401829..402026 | - | 198 | Protein_374 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| C6W78_RS26570 () | 402146..402232 | - | 87 | Protein_375 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| C6W78_RS02030 () | 402235..402495 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| C6W78_RS02035 () | 402681..403454 | + | 774 | WP_122998384.1 | Cell division protein FtsA | VF |
| C6W78_RS02040 () | 403511..403867 | - | 357 | WP_001030482.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| C6W78_RS02045 () | 403860..404138 | - | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| C6W78_RS02050 () | 404243..405955 | - | 1713 | Protein_380 | hypothetical protein | VF |
| C6W78_RS02055 () | 405927..406712 | + | 786 | WP_172906057.1 | Putative lipid II flippase FtsW | VF |
| C6W78_RS02060 () | 406783..407838 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| C6W78_RS02065 () | 407890..408183 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C6W78_RS02070 () | 408186..408584 | + | 399 | WP_042020796.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C6W78_RS02075 () | 408594..409046 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| C6W78_RS02080 () | 409237..410376 | + | 1140 | WP_001356952.1 | RNA ligase RtcB family protein | - |
| C6W78_RS02085 () | 410373..410987 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| C6W78_RS02090 () | 411044..412501 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| C6W78_RS02095 () | 412762..413220 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - () | 413816..413889 | + | 74 | NuclAT_4 | - | - |
| - () | 413816..413889 | + | 74 | NuclAT_4 | - | - |
| - () | 413816..413889 | + | 74 | NuclAT_4 | - | - |
| - () | 413816..413889 | + | 74 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|