MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 74247 bp
Accession: NZ_CP027460 Location: 1..74247 Organism: Escherichia coli strain 90-3040 Replicon: plasmid unnamed
Accession: NZ_CP027460 Location: 1..74247 Organism: Escherichia coli strain 90-3040 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W76_RS28195 () | 144..395 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| C6W76_RS28200 () | 569..754 | - | 186 | WP_032208250.1 | hypothetical protein | - |
| C6W76_RS28205 () | 919..2096 | - | 1178 | Protein_3 | IS91 family transposase ISEc37 | Transposase |
| C6W76_RS28210 () | 2096..2461 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| C6W76_RS28215 () | 2550..2740 | - | 191 | Protein_5 | IS3 family transposase | - |
| C6W76_RS28220 () | 2975..5185 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C6W76_RS28225 () | 5265..5618 | + | 354 | WP_199851308.1 | cytochrome b562 family protein | - |
| C6W76_RS28230 () | 5732..6499 | + | 768 | Protein_8 | IS3 family transposase | - |
| C6W76_RS28235 () | 6579..6974 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| C6W76_RS28240 () | 6974..7933 | - | 960 | WP_032208244.1 | plasmid segregation protein ParM | - |
| C6W76_RS28245 () | 8206..9108 | + | 903 | WP_077790945.1 | DUF1281 domain-containing protein | - |
| C6W76_RS28250 () | 9105..9416 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| C6W76_RS28255 () | 9492..10175 | + | 684 | WP_000086163.1 | DNA methylase | - |
| C6W76_RS28260 () | 10175..10393 | + | 219 | WP_001443814.1 | hypothetical protein | - |
| C6W76_RS28265 () | 10405..10839 | + | 435 | WP_000274418.1 | DUF1380 family protein | - |
| C6W76_RS28985 () | 10884..11654 | + | 771 | WP_032208248.1 | hypothetical protein | - |
| C6W76_RS28280 () | 12069..12386 | + | 318 | Protein_17 | antirestriction protein | - |
| C6W76_RS28285 () | 12441..13653 | + | 1213 | Protein_18 | IS3 family transposase IS629 | Transposase |
| C6W76_RS28290 () | 13852..14073 | + | 222 | WP_047088231.1 | DUF1380 family protein | - |
| C6W76_RS28295 () | 14018..14506 | + | 489 | WP_047088233.1 | surface exclusion protein | - |
| C6W76_RS28300 () | 14538..15269 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| C6W76_RS28305 () | 15522..17736 | + | 2215 | Protein_22 | type IV conjugative transfer system coupling protein TraD | - |
| C6W76_RS28310 () | 17736..19954 | + | 2219 | Protein_23 | conjugative transfer relaxase/helicase TraI | - |
| C6W76_RS28315 () | 20019..21175 | + | 1157 | WP_106888247.1 | IS3 family transposase ISSd1 | Transposase |
| C6W76_RS28320 () | 21112..24252 | + | 3141 | Protein_25 | Multifunctional conjugation protein TraI | Relaxase |
| C6W76_RS28325 () | 24272..25018 | + | 747 | WP_000205763.1 | conjugal transfer pilus acetylase TraX | - |
| C6W76_RS28330 () | 25077..25937 | + | 861 | WP_047088282.1 | putative protein YcjY | VF |
| C6W76_RS28335 () | 26040..26600 | + | 561 | WP_047088283.1 | fertility inhibition protein FinO | - |
| C6W76_RS28340 () | 26733..26945 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C6W76_RS28345 () | 27190..27651 | + | 462 | WP_047088284.1 | thermonuclease family protein | - |
| C6W76_RS28350 () | 27697..27906 | + | 210 | WP_047088285.1 | hemolysin expression modulator Hha | - |
| C6W76_RS28355 () | 27944..28534 | + | 591 | WP_000766812.1 | DUF2726 domain-containing protein | - |
| C6W76_RS28360 () | 28766..29020 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| C6W76_RS28370 () | 29256..29330 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| C6W76_RS28375 () | 29323..30180 | + | 858 | WP_047088286.1 | incFII family plasmid replication initiator RepA | - |
| C6W76_RS28385 () | 31089..31373 | + | 285 | WP_001297026.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C6W76_RS28390 () | 31373..31648 | + | 276 | WP_032206862.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6W76_RS28395 () | 31743..31949 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C6W76_RS28400 () | 32129..33306 | - | 1178 | Protein_39 | IS91 family transposase ISEc37 | Transposase |
| C6W76_RS28405 () | 33306..33671 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| C6W76_RS28410 () | 33708..34852 | + | 1145 | WP_199851309.1 | IS3 family transposase ISSd1 | Transposase |
| C6W76_RS28415 () | 34893..35264 | + | 372 | Protein_42 | chromosome partitioning protein ParB | - |
| C6W76_RS28420 () | 35403..35576 | - | 174 | Protein_43 | DUF4113 domain-containing protein | - |
| C6W76_RS28425 () | 35533..35697 | + | 165 | Protein_44 | antirestriction protein | - |
| C6W76_RS28435 () | 35993..39892 | - | 3900 | WP_106888249.1 | Serine protease EspP | VF |
| C6W76_RS28440 () | 40215..40613 | + | 399 | Protein_46 | type-F conjugative transfer system pilin acetylase TraX | - |
| C6W76_RS28445 () | 40841..42053 | - | 1213 | Protein_47 | IS3 family transposase IS629 | Transposase |
| C6W76_RS28450 () | 42107..42292 | + | 186 | Protein_48 | putative protein YcjY | VF |
| C6W76_RS28455 () | 42357..43513 | + | 1157 | Protein_49 | IS3 family transposase | - |
| C6W76_RS28460 () | 43557..43955 | + | 399 | Protein_50 | IS3 family transposase | - |
| C6W76_RS28465 () | 44460..44984 | + | 525 | WP_000751015.1 | Pap fimbrial major pilin protein | VF |
| C6W76_RS28470 () | 45064..45636 | + | 573 | WP_032207129.1 | PAP fimbrial minor pilin protein | VF |
| C6W76_RS28475 () | 45790..48297 | + | 2508 | WP_032207128.1 | Outer membrane usher protein PapC | VF |
| C6W76_RS28480 () | 48366..49097 | + | 732 | WP_032207127.1 | Chaperone protein PapD | VF |
| C6W76_RS28485 () | 49133..49696 | + | 564 | WP_032207126.1 | nuclease PIN | - |
| C6W76_RS28490 () | 49771..50283 | + | 513 | WP_032207125.1 | Minor fimbrial protein PrsF | VF |
| C6W76_RS28495 () | 50305..51297 | + | 993 | WP_032207124.1 | hypothetical protein | - |
| C6W76_RS28500 () | 51688..52385 | + | 698 | Protein_58 | IS1 family transposase | - |
| C6W76_RS28505 () | 53072..53893 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C6W76_RS28510 () | 53893..54999 | + | 1107 | WP_064756370.1 | glycosyltransferase family 4 protein | - |
| C6W76_RS28515 () | 55089..56810 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C6W76_RS28520 () | 56884..57882 | + | 999 | WP_077744816.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C6W76_RS28525 () | 57935..58123 | + | 189 | Protein_63 | hypothetical protein | - |
| C6W76_RS29175 () | 58270..58356 | - | 87 | Protein_64 | IS3 family transposase ISEhe3 | Transposase |
| C6W76_RS28530 () | 58507..59907 | + | 1401 | Protein_65 | ISL3 family transposase ISEc38 | Transposase |
| C6W76_RS28535 () | 59918..60154 | + | 237 | Protein_66 | Tn3 family transposase | - |
| C6W76_RS28545 () | 60766..61281 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C6W76_RS28550 () | 61283..64279 | + | 2997 | WP_047088213.1 | Hemolysin, chromosomal | VF |
| C6W76_RS28555 () | 64329..66449 | + | 2121 | WP_074433587.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6W76_RS28560 () | 66453..67892 | + | 1440 | WP_032207106.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6W76_RS28565 () | 68013..68506 | + | 494 | Protein_71 | Transcriptional repressor MprA | VF |
| C6W76_RS28575 () | 68539..69236 | - | 698 | Protein_72 | IS1 family transposase | - |
| C6W76_RS28585 () | 70749..70969 | + | 221 | Protein_74 | serine/threonine protein kinase | - |
| C6W76_RS28590 () | 71090..71830 | + | 741 | WP_032208234.1 | site-specific integrase | - |
| C6W76_RS28595 () | 72073..73050 | - | 978 | WP_000361618.1 | RepB family plasmid replication initiator protein | - |
| C6W76_RS28605 () | 73718..74105 | - | 388 | Protein_77 | DDE-type integrase/transposase/recombinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|