MGE detailed information
MGE type: Prophage MGE length: 47925 bp
Accession: NZ_CP027459 Location: 2146510..2194434 Organism: Escherichia coli strain 90-3040 Replicon: chromosome
Accession: NZ_CP027459 Location: 2146510..2194434 Organism: Escherichia coli strain 90-3040 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W76_RS11890 () | 2141889..2143682 | - | 1794 | WP_000107384.1 | Ni/Fe-hydrogenase large subunit | - |
| C6W76_RS11895 () | 2143679..2144797 | - | 1119 | WP_001058323.1 | hydrogenase 1 small subunit | - |
| C6W76_RS11910 () | 2145914..2146384 | + | 471 | WP_072278860.1 | EspF protein | - |
| C6W76_RS11915 () | 2146510..2146779 | - | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6W76_RS11920 () | 2146781..2148094 | - | 1314 | WP_106913942.1 | ISNCY family transposase KIS | Transposase |
| C6W76_RS11925 () | 2148159..2148758 | - | 600 | WP_106913943.1 | hypothetical protein | VF |
| C6W76_RS11930 () | 2148826..2152221 | - | 3396 | WP_047087988.1 | host specificity protein J | - |
| C6W76_RS11935 () | 2152282..2152914 | - | 633 | WP_000090891.1 | tail assembly protein | - |
| C6W76_RS11940 () | 2152851..2153594 | - | 744 | WP_047087989.1 | C40 family peptidase | - |
| C6W76_RS11945 () | 2153600..2154298 | - | 699 | WP_001152619.1 | phage minor tail protein L | - |
| C6W76_RS11950 () | 2154298..2154627 | - | 330 | WP_000847347.1 | phage tail protein | - |
| C6W76_RS11955 () | 2154624..2157185 | - | 2562 | WP_047087991.1 | phage tail tape measure protein | - |
| C6W76_RS11960 () | 2157178..2157612 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| C6W76_RS11965 () | 2157594..2158016 | - | 423 | WP_000479169.1 | phage minor tail protein G | - |
| C6W76_RS11970 () | 2158032..2158772 | - | 741 | WP_001342267.1 | phage tail protein | - |
| C6W76_RS11975 () | 2158780..2159175 | - | 396 | WP_032207007.1 | phage minor tail U family protein | - |
| C6W76_RS11980 () | 2159172..2159747 | - | 576 | WP_000975037.1 | phage tail protein | - |
| C6W76_RS11985 () | 2159762..2160115 | - | 354 | WP_001204544.1 | tail attachment protein | - |
| C6W76_RS11990 () | 2160108..2160482 | - | 375 | WP_000201528.1 | hypothetical protein | - |
| C6W76_RS11995 () | 2160534..2161562 | - | 1029 | WP_000522630.1 | major capsid protein | - |
| C6W76_RS12000 () | 2161620..2161967 | - | 348 | WP_000256818.1 | head decoration protein | - |
| C6W76_RS12005 () | 2162004..2163509 | - | 1506 | WP_001254039.1 | S49 family peptidase | - |
| C6W76_RS12010 () | 2163499..2165091 | - | 1593 | WP_001430223.1 | phage portal protein | - |
| C6W76_RS12015 () | 2165088..2165294 | - | 207 | WP_000258991.1 | gpW family protein | - |
| C6W76_RS12020 () | 2165278..2167206 | - | 1929 | WP_032207005.1 | phage terminase large subunit family protein | - |
| C6W76_RS12025 () | 2167178..2167687 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| C6W76_RS12035 () | 2168090..2168314 | + | 225 | WP_001300236.1 | YlcI/YnfO family protein | - |
| C6W76_RS12040 () | 2168396..2168709 | - | 314 | Protein_2214 | PerC family transcriptional regulator | - |
| C6W76_RS28800 () | 2169238..2169423 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C6W76_RS12055 () | 2169645..2169758 | - | 114 | WP_000675931.1 | hypothetical protein | - |
| C6W76_RS12060 () | 2169979..2170512 | - | 534 | WP_001003111.1 | lysozyme | - |
| C6W76_RS12070 () | 2170672..2170944 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| C6W76_RS12080 () | 2171200..2171415 | - | 216 | WP_053897820.1 | class II holin family protein | - |
| C6W76_RS12090 () | 2171852..2173702 | - | 1851 | WP_106913944.1 | SASA family carbohydrate esterase | - |
| C6W76_RS12095 () | 2174145..2174276 | - | 132 | WP_001344632.1 | DUF3927 family protein | - |
| C6W76_RS12100 () | 2174273..2174635 | - | 363 | Protein_2222 | tellurite resistance TerB family protein | - |
| C6W76_RS12105 () | 2174873..2175694 | - | 822 | WP_047088297.1 | antitermination protein | - |
| C6W76_RS12110 () | 2175691..2176065 | - | 375 | WP_001217410.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6W76_RS12115 () | 2176078..2177127 | - | 1050 | WP_106888130.1 | DUF968 domain-containing protein | - |
| C6W76_RS12120 () | 2177129..2177407 | - | 279 | WP_032207160.1 | hypothetical protein | - |
| C6W76_RS12130 () | 2177840..2178316 | - | 477 | WP_000284536.1 | ImmA/IrrE family metallo-endopeptidase | - |
| C6W76_RS12135 () | 2178319..2178678 | - | 360 | WP_001219082.1 | helix-turn-helix domain-containing protein | - |
| C6W76_RS12140 () | 2178923..2179078 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6W76_RS12150 () | 2179323..2179427 | - | 105 | WP_001278459.1 | hypothetical protein | - |
| C6W76_RS12155 () | 2179537..2180370 | - | 834 | WP_032206192.1 | hypothetical protein | - |
| C6W76_RS12160 () | 2180406..2180618 | - | 213 | WP_032206194.1 | hypothetical protein | - |
| C6W76_RS12165 () | 2180664..2181023 | - | 360 | WP_032206196.1 | hypothetical protein | - |
| C6W76_RS12170 () | 2181077..2181502 | - | 426 | WP_047087727.1 | DUF977 family protein | - |
| C6W76_RS12175 () | 2181543..2182613 | - | 1071 | WP_106888131.1 | phage replisome organizer | - |
| C6W76_RS12180 () | 2182685..2183110 | - | 426 | WP_000693918.1 | Rha family transcriptional regulator | - |
| C6W76_RS12185 () | 2183107..2183370 | - | 264 | WP_001048459.1 | helix-turn-helix domain-containing protein | - |
| C6W76_RS12190 () | 2183478..2183978 | + | 501 | WP_021568728.1 | helix-turn-helix transcriptional regulator | - |
| C6W76_RS12195 () | 2183996..2184187 | + | 192 | WP_000108762.1 | hypothetical protein | Antitoxin Detail |
| C6W76_RS12200 () | 2184187..2184477 | + | 291 | WP_021568727.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6W76_RS12205 () | 2184752..2184904 | + | 153 | WP_000367377.1 | DUF1391 family protein | - |
| C6W76_RS12210 () | 2185003..2185449 | - | 447 | WP_000373334.1 | hypothetical protein | - |
| C6W76_RS12220 () | 2186162..2186350 | + | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| C6W76_RS12225 () | 2186347..2186538 | + | 192 | WP_001098307.1 | DUF1482 family protein | - |
| C6W76_RS12230 () | 2186632..2189107 | + | 2476 | Protein_2245 | 3'-5' exoribonuclease | - |
| C6W76_RS12235 () | 2189175..2189378 | + | 204 | WP_099357990.1 | DUF4224 domain-containing protein | - |
| C6W76_RS12240 () | 2189440..2190596 | + | 1157 | WP_106888078.1 | IS3 family transposase ISSd1 | Transposase |
| C6W76_RS12245 () | 2190662..2191158 | + | 497 | Protein_2248 | hypothetical protein ; Integrase | Integrase |
| C6W76_RS12255 () | 2192372..2192947 | + | 576 | WP_106888132.1 | hypothetical protein ; Integrase | Integrase |
| C6W76_RS12260 () | 2193355..2194014 | + | 660 | WP_000375138.1 | FtsH protease modulator YccA | - |
| C6W76_RS12265 () | 2194105..2194434 | + | 330 | WP_000904442.1 | sulfurtransferase TusE | - |
| C6W76_RS12270 () | 2194431..2194709 | - | 279 | WP_000048252.1 | acylphosphatase | - |
| C6W76_RS12275 () | 2194804..2195994 | + | 1191 | WP_000116288.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| C6W76_RS12280 () | 2196052..2196369 | + | 318 | WP_047087198.1 | heat shock protein HspQ | - |
| C6W76_RS12285 () | 2196414..2196827 | - | 414 | WP_001343235.1 | CoA-binding protein | - |
| C6W76_RS12290 () | 2197000..2197662 | + | 663 | WP_000847791.1 | DUF2057 family protein | - |
| C6W76_RS12295 () | 2197758..2198216 | + | 459 | WP_000424181.1 | methylglyoxal synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|