MGE detailed information
MGE type: Genomic_island MGE length: 43683 bp
Accession: NZ_CP027457 Location: 4880140..4923822 Organism: Escherichia coli strain 88-3493 Replicon: chromosome
Accession: NZ_CP027457 Location: 4880140..4923822 Organism: Escherichia coli strain 88-3493 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W79_RS24870 () | 4875605..4876762 | + | 1158 | WP_001070350.1 | glucans biosynthesis protein MdoC | - |
| C6W79_RS24875 () | 4876770..4878251 | - | 1482 | WP_072148433.1 | cardiolipin synthase ClsC | - |
| C6W79_RS24880 () | 4878193..4878726 | - | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| C6W79_RS24885 () | 4878821..4879132 | - | 312 | WP_000489578.1 | type 1 fimbrial protein | - |
| C6W79_RS24890 () | 4879253..4879585 | - | 333 | WP_001612797.1 | curli assembly protein CsgC | - |
| C6W79_RS24895 () | 4879644..4880099 | - | 456 | WP_000771437.1 | curlin major subunit CsgA | - |
| C6W79_RS24900 () | 4880140..4880595 | - | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| C6W79_RS24915 () | 4881349..4881999 | + | 651 | WP_000481500.1 | CsgBAC operon transcriptional regulatory protein | VF |
| C6W79_RS24920 () | 4882004..4882393 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| C6W79_RS24925 () | 4882418..4882834 | + | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| C6W79_RS24930 () | 4882861..4883694 | + | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| C6W79_RS24935 () | 4883758..4884249 | - | 492 | WP_001718002.1 | DUF1097 domain-containing protein | - |
| C6W79_RS24940 () | 4884351..4884905 | - | 555 | WP_001612795.1 | molecular chaperone YcdY | - |
| C6W79_RS24945 () | 4884929..4885666 | - | 738 | WP_001612793.1 | zinc-binding phosphatase | - |
| C6W79_RS24950 () | 4885721..4886659 | - | 939 | WP_001612791.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| C6W79_RS24960 () | 4887130..4887971 | - | 842 | Protein_4575 | DUF4942 domain-containing protein | - |
| C6W79_RS24970 () | 4888252..4889271 | - | 1020 | WP_000875212.1 | IS110 family transposase ISEc66 | Transposase |
| C6W79_RS24975 () | 4889485..4889682 | - | 198 | WP_000839242.1 | DUF957 domain-containing protein | - |
| C6W79_RS24980 () | 4889694..4890182 | - | 489 | WP_041124065.1 | hypothetical protein | - |
| C6W79_RS24985 () | 4890179..4890556 | - | 378 | WP_000854745.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6W79_RS24990 () | 4890646..4891014 | - | 369 | WP_047651719.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6W79_RS24995 () | 4891094..4891315 | - | 222 | WP_000691818.1 | DUF987 domain-containing protein | - |
| C6W79_RS25000 () | 4891402..4891878 | - | 477 | WP_001186725.1 | RadC family protein | - |
| C6W79_RS25005 () | 4891894..4892379 | - | 486 | WP_047651721.1 | antirestriction protein | - |
| C6W79_RS25010 () | 4892471..4893289 | - | 819 | WP_047651723.1 | DUF945 domain-containing protein | - |
| C6W79_RS25015 () | 4893379..4893654 | - | 276 | WP_077875616.1 | DUF905 family protein | - |
| C6W79_RS25020 () | 4893689..4894144 | - | 456 | WP_047651727.1 | hypothetical protein | - |
| C6W79_RS25025 () | 4894220..4896736 | - | 2517 | WP_096148373.1 | hypothetical protein | - |
| C6W79_RS25030 () | 4896857..4899976 | - | 3120 | WP_096148375.1 | autotransporter adhesin Ag43 | - |
| C6W79_RS25035 () | 4900349..4901221 | - | 873 | WP_001069732.1 | GTPase family protein | - |
| C6W79_RS25040 () | 4901503..4902219 | - | 717 | WP_001288265.1 | hypothetical protein | - |
| C6W79_RS25045 () | 4902266..4902868 | + | 603 | WP_001399565.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6W79_RS25050 () | 4903027..4904388 | + | 1362 | WP_050866907.1 | deoxyguanosinetriphosphate triphosphohydrolase family protein | - |
| C6W79_RS25060 () | 4905421..4905660 | + | 240 | WP_024175231.1 | hypothetical protein | - |
| C6W79_RS25065 () | 4905700..4908138 | + | 2439 | WP_000985461.1 | type I restriction-modification system subunit M | - |
| C6W79_RS25070 () | 4908138..4909445 | + | 1308 | WP_000228012.1 | restriction endonuclease subunit S | - |
| C6W79_RS26450 () | 4909492..4910107 | + | 616 | Protein_4596 | DUF4433 domain-containing protein | - |
| C6W79_RS26455 () | 4910104..4911171 | + | 1068 | WP_024175232.1 | macro domain-containing protein | - |
| C6W79_RS25080 () | 4911190..4914285 | + | 3096 | WP_000108736.1 | HsdR family type I site-specific deoxyribonuclease | - |
| C6W79_RS25085 () | 4914285..4915001 | + | 717 | WP_001122107.1 | M48 family metallopeptidase | - |
| C6W79_RS25090 () | 4915453..4915878 | + | 426 | WP_050866906.1 | IS66 family transposase IS682 | Transposase |
| C6W79_RS25095 () | 4915875..4916225 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| C6W79_RS25100 () | 4916256..4917869 | + | 1614 | WP_106888566.1 | IS66 family transposase ISEc23 | Transposase |
| C6W79_RS25105 () | 4917910..4918284 | - | 375 | WP_000171783.1 | hypothetical protein | - |
| C6W79_RS25110 () | 4918290..4919696 | - | 1407 | Protein_4604 | VENN motif pre-toxin domain-containing protein | - |
| C6W79_RS25115 () | 4919743..4920006 | - | 264 | WP_000118523.1 | hypothetical protein | - |
| C6W79_RS25120 () | 4920003..4920719 | - | 717 | WP_050866961.1 | DUF4258 domain-containing protein | - |
| C6W79_RS25130 () | 4920952..4921809 | - | 858 | WP_050866960.1 | hypothetical protein | - |
| C6W79_RS25135 () | 4922174..4922467 | - | 294 | WP_021578776.1 | hypothetical protein | - |
| C6W79_RS26610 () | 4922464..4922838 | - | 375 | WP_032152968.1 | filamentous hemagglutinin/adhesin | - |
| C6W79_RS25145 () | 4923439..4923822 | - | 384 | WP_047626466.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|