MGE detailed information
MGE type: Prophage MGE length: 48725 bp
Accession: NZ_CP027454 Location: 3089980..3138704 Organism: Escherichia coli strain 2014C-4423 Replicon: chromosome
Accession: NZ_CP027454 Location: 3089980..3138704 Organism: Escherichia coli strain 2014C-4423 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W74_RS30150 () | 3085969..3086016 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C6W74_RS16395 () | 3086030..3087013 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| C6W74_RS16400 () | 3087288..3087461 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| C6W74_RS16405 () | 3087491..3088864 | + | 1374 | WP_000123758.1 | ATP-dependent RNA helicase DbpA | - |
| C6W74_RS16410 () | 3088993..3089928 | - | 936 | WP_001157421.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C6W74_RS16415 () | 3089980..3091215 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C6W74_RS16420 () | 3091217..3091432 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C6W74_RS16425 () | 3091511..3091720 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 3091536..3091714 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 3091536..3091714 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 3091536..3091714 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 3091536..3091714 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C6W74_RS16430 () | 3091713..3091907 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C6W74_RS16435 () | 3091964..3092773 | - | 810 | WP_000595429.1 | recombination protein RecT | - |
| C6W74_RS16440 () | 3092766..3095435 | - | 2670 | WP_000102191.1 | exodeoxyribonuclease VIII | - |
| C6W74_RS16445 () | 3095516..3095692 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| C6W74_RS16450 () | 3095686..3095907 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| C6W74_RS16455 () | 3096332..3096484 | - | 153 | WP_050437129.1 | DUF1391 family protein | - |
| C6W74_RS16465 () | 3096865..3097329 | - | 465 | WP_001253182.1 | helix-turn-helix domain-containing protein | - |
| C6W74_RS16470 () | 3097434..3097709 | + | 276 | WP_000171139.1 | helix-turn-helix domain-containing protein | - |
| C6W74_RS16475 () | 3097693..3098115 | + | 423 | WP_000702023.1 | hypothetical protein | - |
| C6W74_RS16480 () | 3098128..3098985 | + | 858 | Protein_2993 | DUF1376 domain-containing protein | - |
| C6W74_RS16485 () | 3098992..3099738 | + | 747 | WP_000788989.1 | ATP-binding protein | - |
| C6W74_RS16490 () | 3099760..3100521 | + | 762 | WP_001370676.1 | DUF1627 domain-containing protein | - |
| C6W74_RS16495 () | 3100537..3100953 | + | 417 | WP_001151266.1 | DUF977 family protein | - |
| C6W74_RS16500 () | 3100950..3101423 | + | 474 | WP_001275735.1 | class I SAM-dependent methyltransferase | - |
| C6W74_RS16505 () | 3101746..3102324 | + | 579 | WP_001204666.1 | sce7726 family protein | - |
| C6W74_RS16510 () | 3102284..3103381 | - | 1098 | WP_000156213.1 | beta family protein | - |
| C6W74_RS16520 () | 3105168..3106649 | + | 1482 | WP_106901570.1 | host specificity protein J | - |
| C6W74_RS16525 () | 3106716..3107315 | + | 600 | WP_001230496.1 | hypothetical protein | VF |
| C6W74_RS16530 () | 3107380..3108693 | + | 1314 | WP_032212694.1 | ISNCY family transposase KIS | Transposase |
| C6W74_RS16535 () | 3108695..3108964 | + | 270 | WP_001023386.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6W74_RS16545 () | 3109367..3110380 | + | 1014 | WP_122993102.1 | hypothetical protein | VF |
| C6W74_RS16555 () | 3110751..3110993 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C6W74_RS16560 () | 3111125..3112408 | + | 1284 | Protein_3007 | MHS family MFS transporter YdfJ | - |
| C6W74_RS16565 () | 3112497..3113958 | + | 1462 | Protein_3008 | mannitol dehydrogenase family protein | - |
| C6W74_RS16570 () | 3113994..3114197 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C6W74_RS16575 () | 3114375..3115061 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C6W74_RS16580 () | 3115150..3115896 | - | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| C6W74_RS16590 () | 3116033..3118078 | + | 2046 | WP_001370614.1 | peptidyl-dipeptidase Dcp | - |
| C6W74_RS16595 () | 3118122..3118640 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| C6W74_RS16600 () | 3118916..3119308 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| C6W74_RS16605 () | 3119563..3120453 | + | 891 | WP_000592837.1 | diguanylate cyclase DgcZ | - |
| C6W74_RS30155 () | 3120568..3120672 | - | 105 | WP_211180496.1 | protein MgtT | - |
| C6W74_RS16610 () | 3120672..3120767 | - | 96 | WP_000901367.1 | protein MgtS | - |
| C6W74_RS16615 () | 3120894..3122081 | - | 1188 | WP_001054189.1 | efflux MFS transporter YdeE | - |
| C6W74_RS16620 () | 3122276..3123175 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| C6W74_RS16625 () | 3123220..3123942 | - | 723 | WP_106901571.1 | GntR family transcriptional regulator | - |
| C6W74_RS16640 () | 3125384..3125695 | + | 312 | WP_000722571.1 | PTS sugar transporter subunit IIB | - |
| C6W74_RS16645 () | 3125810..3127132 | + | 1323 | WP_001370581.1 | PTS sugar transporter subunit IIC | - |
| C6W74_RS16650 () | 3127160..3127471 | + | 312 | WP_001296721.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| C6W74_RS16655 () | 3127527..3129200 | + | 1674 | WP_001022785.1 | carbohydrate porin | - |
| C6W74_RS16660 () | 3129225..3130247 | + | 1023 | Protein_3026 | 6-phospho-beta-glucosidase | - |
| C6W74_RS16665 () | 3130313..3130902 | + | 590 | Protein_3027 | IS3 family transposase ISSfl10 | Transposase |
| C6W74_RS16675 () | 3132207..3132782 | + | 576 | Protein_3029 | IS3 family transposase ISSd1 | Transposase |
| C6W74_RS16680 () | 3132825..3133244 | + | 420 | Protein_3030 | family 1 glycosylhydrolase | - |
| C6W74_RS16685 () | 3133301..3133519 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| C6W74_RS16690 () | 3133551..3133934 | - | 384 | WP_000091199.1 | HTH-type transcriptional activator RhaS | VF |
| C6W74_RS16695 () | 3133954..3134388 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| C6W74_RS16700 () | 3134600..3135265 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| C6W74_RS16705 () | 3135290..3136480 | - | 1191 | WP_000210804.1 | L-arabinose MFS transporter | - |
| C6W74_RS16710 () | 3136630..3137745 | - | 1116 | WP_000258583.1 | putative protein YneK | - |
| C6W74_RS16715 () | 3137823..3138704 | - | 882 | WP_000366496.1 | HTH-type transcriptional regulator HdfR | VF |
| C6W74_RS16720 () | 3138805..3140193 | + | 1389 | WP_001370589.1 | succinate-semialdehyde dehydrogenase | - |
| C6W74_RS16725 () | 3140257..3141183 | + | 927 | WP_000257409.1 | glutaminase B | - |
| C6W74_RS16730 () | 3141183..3141542 | + | 360 | WP_001191022.1 | DUF4186 domain-containing protein | - |
| C6W74_RS16740 () | 3141681..3143099 | + | 1419 | WP_000558044.1 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|