MGE detailed information
MGE type: Conjugative plasmid MGE length: 159611 bp
Accession: NZ_CP027453 Location: 1..159611 Organism: Escherichia coli strain 2014C-3338 Replicon: plasmid unnamed
Accession: NZ_CP027453 Location: 1..159611 Organism: Escherichia coli strain 2014C-3338 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W71_RS24815 () | 781..1029 | + | 249 | WP_000618108.1 | DinI-like family protein | - |
| C6W71_RS24820 () | 1026..1478 | + | 453 | WP_000109075.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6W71_RS24825 () | 1462..2732 | + | 1271 | Protein_3 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C6W71_RS24835 () | 2952..3578 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| C6W71_RS26095 () | 3575..3877 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| C6W71_RS26100 () | 4314..4565 | + | 252 | WP_031322317.1 | hypothetical protein | - |
| C6W71_RS24855 () | 4565..5155 | + | 591 | WP_000194580.1 | hypothetical protein | - |
| C6W71_RS24860 () | 5175..5522 | - | 348 | WP_050867747.1 | hypothetical protein | - |
| C6W71_RS24865 () | 5641..5988 | + | 348 | WP_106889579.1 | colicin transporter | - |
| C6W71_RS24870 () | 6006..7886 | - | 1881 | WP_001283354.1 | colicin | - |
| C6W71_RS24875 () | 8165..8830 | - | 666 | WP_000448923.1 | hypothetical protein | - |
| C6W71_RS24880 () | 8853..9062 | - | 210 | Protein_12 | IS21 family transposase IS21 | Transposase |
| C6W71_RS24890 () | 9559..11532 | + | 1974 | WP_024199761.1 | Hemin receptor | VF |
| C6W71_RS24895 () | 11551..12342 | + | 792 | WP_000977390.1 | DUF4198 domain-containing protein | - |
| C6W71_RS24905 () | 12847..13311 | + | 465 | WP_001373091.1 | IS66 family transposase ISEc23 | Transposase |
| C6W71_RS24910 () | 13263..13613 | + | 351 | WP_000950104.1 | IS66 family transposase IS682 | Transposase |
| C6W71_RS24915 () | 13644..15236 | + | 1593 | WP_000080210.1 | IS66 family transposase ISEc47 | Transposase |
| C6W71_RS24920 () | 15266..15439 | + | 174 | Protein_18 | DUF4113 domain-containing protein | - |
| C6W71_RS24925 () | 15441..15857 | - | 417 | WP_001278809.1 | plasmid partitioning/stability family protein | - |
| C6W71_RS24930 () | 15850..16830 | - | 981 | WP_000688510.1 | plasmid segregation protein ParM | - |
| C6W71_RS24935 () | 17245..17553 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| C6W71_RS24940 () | 17640..18284 | - | 645 | WP_001144036.1 | ParA family protein | - |
| C6W71_RS24945 () | 18464..19270 | - | 807 | WP_000016966.1 | site-specific integrase | - |
| C6W71_RS24950 () | 19271..19576 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C6W71_RS24955 () | 19578..19796 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C6W71_RS24960 () | 20392..20652 | + | 261 | WP_000343100.1 | hypothetical protein | - |
| C6W71_RS24965 () | 20649..21239 | + | 591 | WP_033802802.1 | hypothetical protein | - |
| C6W71_RS24970 () | 21257..21604 | - | 348 | WP_000142427.1 | hypothetical protein | - |
| C6W71_RS24980 () | 22074..22409 | - | 336 | Protein_29 | colicin | - |
| C6W71_RS24985 () | 22504..23235 | - | 732 | WP_000850413.1 | complement resistance protein TraT | - |
| C6W71_RS26105 () | 23512..23622 | - | 111 | Protein_31 | IS481 family transposase | - |
| C6W71_RS26110 () | 23626..23837 | - | 212 | Protein_32 | hypothetical protein | - |
| C6W71_RS25005 () | 24406..25383 | + | 978 | WP_001369978.1 | RepB family plasmid replication initiator protein | - |
| C6W71_RS25010 () | 25622..25904 | - | 283 | Protein_34 | ISL3 family transposase ISEc53 | Transposase |
| C6W71_RS25015 () | 26061..26291 | - | 231 | WP_032279745.1 | hypothetical protein | - |
| C6W71_RS25025 () | 26421..26915 | - | 495 | WP_099528465.1 | Transcriptional repressor MprA | VF |
| C6W71_RS25030 () | 27036..28476 | - | 1441 | Protein_37 | Hemolysin secretion protein D, chromosomal | VF |
| C6W71_RS25040 () | 28480..30600 | - | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6W71_RS25045 () | 30650..33646 | - | 2997 | WP_032489272.1 | Hemolysin, chromosomal | VF |
| C6W71_RS25050 () | 33648..34163 | - | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| C6W71_RS25060 () | 34591..35394 | - | 804 | WP_000899428.1 | Outer membrane protein A | VF |
| C6W71_RS25065 () | 35419..39747 | - | 4329 | WP_106889582.1 | Autotransporter adhesin SadA | VF |
| C6W71_RS25070 () | 39764..40045 | - | 282 | WP_040118374.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C6W71_RS25075 () | 41141..42697 | + | 1557 | WP_040118375.1 | L-lactate permease | - |
| C6W71_RS25080 () | 42748..43467 | + | 720 | WP_001102093.1 | (Fe-S)-binding protein | - |
| C6W71_RS25085 () | 43478..44893 | + | 1416 | WP_000054160.1 | iron-sulfur cluster-binding protein | - |
| C6W71_RS25090 () | 44898..45596 | + | 699 | WP_021293086.1 | lactate utilization protein C | - |
| C6W71_RS25100 () | 45940..46404 | - | 465 | WP_106889583.1 | IS3 family transposase ISKpn8 | Transposase |
| C6W71_RS25105 () | 46520..46831 | - | 312 | WP_000203479.1 | hypothetical protein | - |
| C6W71_RS25110 () | 46859..47050 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| C6W71_RS25115 () | 47063..47425 | - | 363 | WP_106889584.1 | hypothetical protein | - |
| C6W71_RS25125 () | 47559..47768 | + | 210 | WP_000855713.1 | hypothetical protein | - |
| C6W71_RS25130 () | 47931..51833 | - | 3903 | WP_106889585.1 | Serine protease EspP | VF |
| C6W71_RS25135 () | 52213..52716 | - | 504 | WP_106889586.1 | thermonuclease family protein | - |
| C6W71_RS25140 () | 52875..53552 | + | 678 | WP_106889587.1 | DNA-binding protein | - |
| C6W71_RS25155 () | 54042..54362 | - | 321 | WP_001373084.1 | hypothetical protein | - |
| C6W71_RS25160 () | 54420..55523 | - | 1104 | Protein_57 | IS3 family transposase | - |
| C6W71_RS25165 () | 55720..57101 | - | 1382 | Protein_58 | autoagglutinating adhesin Saa | - |
| C6W71_RS26115 () | 57355..57444 | + | 90 | Protein_59 | transposase | - |
| C6W71_RS25170 () | 57511..58659 | + | 1149 | Protein_60 | IS3 family transposase | - |
| C6W71_RS25180 () | 58967..61054 | + | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| C6W71_RS25185 () | 61315..61737 | - | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| C6W71_RS25190 () | 62072..62254 | - | 183 | Protein_63 | IS110 family transposase | - |
| C6W71_RS25195 () | 62316..62504 | + | 189 | Protein_64 | IS66 family transposase IS682 | Transposase |
| C6W71_RS25205 () | 62788..63213 | - | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| C6W71_RS25210 () | 63230..64273 | - | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| C6W71_RS25215 () | 64327..65291 | - | 965 | Protein_67 | transposase | - |
| C6W71_RS25220 () | 65322..65670 | - | 349 | Protein_68 | IS66 family transposase IS682 | Transposase |
| C6W71_RS25225 () | 65667..66092 | - | 426 | WP_000435654.1 | IS66 family transposase IS682 | Transposase |
| C6W71_RS25235 () | 66397..66582 | - | 186 | WP_071531845.1 | hypothetical protein | - |
| C6W71_RS25240 () | 66582..67880 | - | 1299 | Protein_71 | VENN motif pre-toxin domain-containing protein | - |
| C6W71_RS25245 () | 68136..68309 | + | 174 | Protein_72 | Tn3 family transposase | - |
| C6W71_RS25250 () | 68506..69502 | + | 997 | Protein_73 | IS110 family transposase IS5075 | Transposase |
| C6W71_RS25980 () | 69779..69856 | - | 78 | Protein_74 | colicin V | - |
| C6W71_RS25985 () | 69834..70070 | - | 237 | WP_032257624.1 | colicin V immunity protein | - |
| C6W71_RS25265 () | 70737..70994 | - | 258 | WP_077788362.1 | hypothetical protein | - |
| C6W71_RS25270 () | 71080..71574 | - | 495 | WP_001373089.1 | DUF2569 domain-containing protein | - |
| C6W71_RS25275 () | 71660..71917 | - | 258 | WP_000812110.1 | hypothetical protein | - |
| C6W71_RS25280 () | 71914..72537 | - | 624 | WP_064767287.1 | hypothetical protein | - |
| C6W71_RS25285 () | 72953..73135 | - | 183 | WP_000205441.1 | hypothetical protein | - |
| C6W71_RS25290 () | 73145..73447 | - | 303 | WP_001370014.1 | hypothetical protein | - |
| C6W71_RS25295 () | 73434..82919 | - | 9486 | WP_106889588.1 | tRNA nuclease CdiA | VF |
| C6W71_RS25300 () | 82932..84698 | - | 1767 | WP_033802720.1 | Hemolysin transporter protein ShlB | VF |
| C6W71_RS25315 () | 85314..85553 | - | 240 | WP_000859017.1 | MarR family transcriptional regulator | - |
| C6W71_RS25320 () | 85566..85826 | - | 261 | WP_072127342.1 | hypothetical protein | - |
| C6W71_RS25340 () | 86522..87553 | - | 1032 | WP_000907876.1 | hypothetical protein | - |
| C6W71_RS25355 () | 88255..88896 | + | 642 | WP_000335846.1 | transcription termination factor NusG | - |
| C6W71_RS25360 () | 89037..89702 | + | 666 | WP_000154144.1 | hypothetical protein | - |
| C6W71_RS25370 () | 89969..90589 | + | 621 | WP_000176499.1 | DUF1449 family protein | - |
| C6W71_RS25375 () | 90616..92310 | + | 1695 | WP_000482662.1 | flotillin family protein | - |
| C6W71_RS25380 () | 92316..92633 | + | 318 | WP_001373093.1 | PilI type IV pilus biogenesis protein | - |
| C6W71_RS25390 () | 93242..94309 | + | 1068 | WP_106889589.1 | hypothetical protein | VF |
| C6W71_RS25395 () | 94314..94751 | + | 438 | WP_096851420.1 | type IV pilus biogenesis protein PilM | - |
| C6W71_RS25400 () | 94782..96401 | + | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| C6W71_RS25405 () | 96422..97717 | + | 1296 | WP_096851422.1 | type 4b pilus protein PilO2 | - |
| C6W71_RS25410 () | 97707..98159 | + | 453 | WP_001112925.1 | type IV pilus biogenesis protein PilP | - |
| C6W71_RS25415 () | 98244..99752 | + | 1509 | WP_000886636.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| C6W71_RS25420 () | 99754..100854 | + | 1101 | WP_001563249.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| C6W71_RS25425 () | 100928..101464 | + | 537 | WP_001011158.1 | cleavage protein | - |
| C6W71_RS25430 () | 101518..101991 | + | 474 | WP_000870986.1 | hypothetical protein | VF |
| C6W71_RS25435 () | 102010..102645 | + | 636 | WP_000478594.1 | prepilin peptidase | - |
| C6W71_RS25440 () | 102650..104014 | + | 1365 | WP_096851435.1 | hypothetical protein | VF |
| C6W71_RS25455 () | 104472..104762 | + | 291 | WP_000681897.1 | hypothetical protein | - |
| C6W71_RS25460 () | 104854..105174 | - | 321 | WP_000695052.1 | hypothetical protein | - |
| C6W71_RS25465 () | 105434..106255 | + | 822 | WP_000804094.1 | hypothetical protein | - |
| C6W71_RS25470 () | 106345..107547 | + | 1203 | WP_097495161.1 | conjugal transfer protein TraF | - |
| C6W71_RS25475 () | 107905..108357 | + | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| C6W71_RS25480 () | 108354..109190 | + | 837 | WP_000848138.1 | hypothetical protein | VF |
| C6W71_RS25485 () | 109174..110322 | + | 1149 | WP_000625247.1 | putative protein YggR | VF |
| C6W71_RS25490 () | 110319..110609 | + | 291 | WP_000817799.1 | hypothetical protein | - |
| C6W71_RS25495 () | 110673..114688 | + | 4016 | Protein_111 | DNA primase | - |
| C6W71_RS25500 () | 114705..115055 | + | 351 | WP_106889590.1 | conjugal transfer protein | - |
| C6W71_RS25505 () | 115067..115762 | + | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| C6W71_RS25510 () | 115773..116747 | + | 975 | WP_001165562.1 | hypothetical protein | VF |
| C6W71_RS25515 () | 116751..118082 | + | 1332 | WP_001272016.1 | conjugal transfer protein TraO | - |
| C6W71_RS25520 () | 118079..118792 | + | 714 | WP_000787009.1 | conjugal transfer protein TraP | - |
| C6W71_RS25525 () | 118792..119319 | + | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| C6W71_RS25530 () | 119366..119764 | + | 399 | WP_032309087.1 | hypothetical protein | - |
| C6W71_RS25535 () | 119821..120072 | + | 252 | WP_001277575.1 | hypothetical protein | - |
| C6W71_RS25540 () | 119987..120805 | + | 819 | WP_072148066.1 | conjugal transfer protein TraT | - |
| C6W71_RS25545 () | 120862..121221 | + | 360 | WP_021552469.1 | hypothetical protein | - |
| C6W71_RS25550 () | 121221..121601 | + | 381 | WP_106889591.1 | hypothetical protein | - |
| C6W71_RS25555 () | 121777..124821 | + | 3045 | WP_063106954.1 | conjugal transfer protein | - |
| C6W71_RS25560 () | 124821..125438 | + | 618 | WP_000286857.1 | hypothetical protein | - |
| C6W71_RS25565 () | 125399..126604 | + | 1206 | WP_157912476.1 | conjugal transfer protein TraW | - |
| C6W71_RS25570 () | 126601..127170 | + | 570 | WP_001204060.1 | conjugal transfer protein TraX | - |
| C6W71_RS25575 () | 127243..129408 | + | 2166 | WP_106889592.1 | DotA/TraY family protein | - |
| C6W71_RS25580 () | 129495..130139 | + | 645 | WP_106889593.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C6W71_RS25585 () | 130296..130457 | + | 162 | WP_001138649.1 | hypothetical protein | - |
| C6W71_RS25590 () | 130454..130606 | - | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| C6W71_RS25595 () | 130940..131182 | + | 243 | WP_000064387.1 | hypothetical protein | - |
| C6W71_RS25600 () | 131275..132810 | - | 1536 | WP_194870291.1 | phosphoethanolamine transferase | - |
| C6W71_RS25605 () | 133010..133465 | - | 456 | WP_106889594.1 | DUF2569 family protein | - |
| C6W71_RS25610 () | 133553..134176 | - | 624 | WP_106889595.1 | DNA-binding protein | - |
| C6W71_RS25615 () | 134335..134802 | + | 468 | WP_106889596.1 | thermonuclease family protein | - |
| C6W71_RS25620 () | 135195..139274 | + | 4080 | WP_106889597.1 | Serine protease SepA autotransporter | VF |
| C6W71_RS25630 () | 139781..140146 | + | 366 | WP_011310096.1 | hypothetical protein | - |
| C6W71_RS25635 () | 140156..140347 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| C6W71_RS25640 () | 140375..140686 | + | 312 | WP_000203481.1 | hypothetical protein | - |
| C6W71_RS25650 () | 141461..142732 | + | 1272 | WP_048239473.1 | IncI1-type conjugal transfer protein TrbA | - |
| C6W71_RS25655 () | 142729..143847 | + | 1119 | WP_096851391.1 | DsbC family protein | - |
| C6W71_RS25660 () | 143828..146131 | + | 2304 | WP_106889598.1 | TraM recognition domain-containing protein | - |
| C6W71_RS25670 () | 146610..146840 | + | 231 | WP_071591569.1 | hypothetical protein | - |
| C6W71_RS25675 () | 146938..147369 | - | 432 | WP_073614123.1 | tolA family protein | - |
| C6W71_RS25680 () | 147437..150149 | - | 2713 | Protein_145 | Protein TraI | Relaxase |
| C6W71_RS25690 () | 150161..150493 | - | 333 | WP_106889600.1 | nikA protein | - |
| C6W71_RS25695 () | 150725..151060 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C6W71_RS25700 () | 151145..151993 | - | 849 | WP_106889601.1 | DUF4942 domain-containing protein | - |
| C6W71_RS25715 () | 152573..152824 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| C6W71_RS25720 () | 152855..153088 | - | 234 | WP_001370006.1 | hypothetical protein | - |
| C6W71_RS25725 () | 153088..154014 | - | 927 | WP_000038346.1 | Recombination-promoting nuclease RpnA | VF |
| C6W71_RS25730 () | 154079..154345 | - | 267 | WP_106889602.1 | hypothetical protein | - |
| C6W71_RS25735 () | 154438..154872 | - | 435 | WP_000218847.1 | hypothetical protein | - |
| C6W71_RS25745 () | 155604..156104 | - | 501 | WP_000117616.1 | antirestriction protein ArdA | - |
| C6W71_RS26120 () | 156517..157287 | - | 771 | WP_001006218.1 | hypothetical protein | - |
| C6W71_RS25760 () | 157332..157766 | - | 435 | WP_000274419.1 | DUF1380 family protein | - |
| C6W71_RS25765 () | 157780..158001 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| C6W71_RS25770 () | 158002..158685 | - | 684 | WP_000086114.1 | DNA methylase | - |
| C6W71_RS25775 () | 158761..159074 | - | 314 | Protein_159 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|