MGE detailed information
MGE type: Prophage MGE length: 53122 bp
Accession: NZ_CP027452 Location: 1616517..1669638 Organism: Escherichia coli strain 2014C-3338 Replicon: chromosome
Accession: NZ_CP027452 Location: 1616517..1669638 Organism: Escherichia coli strain 2014C-3338 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W71_RS08375 () | 1611572..1611988 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| C6W71_RS08380 () | 1612099..1612812 | - | 714 | WP_001317548.1 | acid phosphatase AphA | - |
| C6W71_RS08390 () | 1613214..1613717 | + | 504 | WP_001027388.1 | hypothetical protein | - |
| C6W71_RS08395 () | 1613939..1615132 | - | 1194 | WP_001696415.1 | aromatic amino acid transaminase | - |
| C6W71_RS08400 () | 1615385..1616464 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| C6W71_RS08405 () | 1616517..1617932 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| C6W71_RS08410 () | 1618015..1618998 | + | 984 | WP_000235522.1 | Quinone oxidoreductase 1 | VF |
| C6W71_RS08415 () | 1619164..1619406 | - | 243 | WP_000891406.1 | envelope stress response protein PspG | - |
| C6W71_RS08420 () | 1619540..1620577 | - | 1038 | WP_001514813.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| C6W71_RS08425 () | 1620666..1621763 | + | 1098 | WP_000332263.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6W71_RS08430 () | 1621825..1622073 | + | 249 | WP_106889410.1 | DinI family protein | - |
| C6W71_RS08435 () | 1622344..1623015 | - | 672 | WP_033802776.1 | DUF4376 domain-containing protein | - |
| C6W71_RS08440 () | 1623084..1624199 | - | 1116 | WP_106889411.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6W71_RS08445 () | 1624344..1624484 | - | 141 | WP_000078855.1 | Hok/Gef family protein | - |
| C6W71_RS08450 () | 1624683..1628369 | - | 3687 | WP_106889412.1 | DUF1983 domain-containing protein | - |
| C6W71_RS08455 () | 1629284..1629916 | - | 633 | WP_072121435.1 | tail assembly protein | - |
| C6W71_RS08460 () | 1629862..1630605 | - | 744 | WP_044808579.1 | C40 family peptidase | - |
| C6W71_RS08465 () | 1630616..1631314 | - | 699 | WP_044191034.1 | phage minor tail protein L | - |
| C6W71_RS08470 () | 1631314..1631643 | - | 330 | WP_000847279.1 | phage tail protein | - |
| C6W71_RS08475 () | 1631640..1634273 | - | 2634 | WP_033811966.1 | phage tail tape measure protein | - |
| C6W71_RS08480 () | 1634263..1634667 | - | 405 | WP_024177471.1 | phage tail assembly protein T | - |
| C6W71_RS08485 () | 1634694..1635125 | - | 432 | WP_000479078.1 | phage minor tail protein G | - |
| C6W71_RS08490 () | 1635145..1635894 | - | 750 | WP_000235129.1 | phage tail protein | - |
| C6W71_RS08495 () | 1635902..1636300 | - | 399 | WP_000682716.1 | tail protein | - |
| C6W71_RS08500 () | 1636313..1636936 | - | 624 | WP_000974963.1 | phage tail protein | - |
| C6W71_RS08505 () | 1636939..1637220 | - | 282 | WP_001281350.1 | DNA breaking-rejoining protein | - |
| C6W71_RS08510 () | 1637213..1637539 | - | 327 | WP_000414249.1 | DUF2190 family protein | - |
| C6W71_RS08515 () | 1637627..1639651 | - | 2025 | WP_001114424.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| C6W71_RS08520 () | 1639596..1641098 | - | 1503 | WP_106889413.1 | phage portal protein | - |
| C6W71_RS08525 () | 1641098..1641310 | - | 213 | WP_000102415.1 | hypothetical protein | - |
| C6W71_RS08530 () | 1641307..1643430 | - | 2124 | WP_001077608.1 | phage terminase large subunit family protein | - |
| C6W71_RS08535 () | 1643427..1643903 | - | 477 | WP_000373398.1 | DUF1441 family protein | - |
| C6W71_RS08545 () | 1644316..1644783 | - | 468 | WP_001255340.1 | lysis protein | - |
| C6W71_RS08550 () | 1644780..1645313 | - | 534 | WP_000992040.1 | lysozyme | - |
| C6W71_RS08555 () | 1645439..1645759 | + | 321 | WP_001063217.1 | hypothetical protein | - |
| C6W71_RS08560 () | 1645739..1646413 | - | 675 | WP_106889572.1 | hypothetical protein | - |
| C6W71_RS08565 () | 1646417..1646632 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| C6W71_RS08570 () | 1646710..1646955 | - | 246 | WP_001290208.1 | DUF826 domain-containing protein | - |
| C6W71_RS08575 () | 1646996..1647175 | - | 180 | WP_000142780.1 | DUF1378 family protein | - |
| C6W71_RS08580 () | 1647311..1649257 | - | 1947 | WP_000142974.1 | DUF1737 domain-containing protein | - |
| C6W71_RS08590 () | 1649770..1650039 | - | 270 | WP_000738072.1 | Shiga toxin subunit B | VF |
| C6W71_RS08595 () | 1650051..1651010 | - | 960 | WP_001365678.1 | Shiga toxin subunit A | VF |
| C6W71_RS08615 () | 1651393..1652451 | - | 1059 | WP_000483502.1 | site-specific DNA-methyltransferase | - |
| C6W71_RS08620 () | 1652603..1652800 | - | 198 | WP_000917735.1 | hypothetical protein | - |
| C6W71_RS08625 () | 1653016..1653396 | - | 381 | WP_001204806.1 | antitermination protein Q | - |
| C6W71_RS08630 () | 1653414..1654403 | - | 990 | WP_001202275.1 | DUF968 domain-containing protein | - |
| C6W71_RS08635 () | 1654411..1655220 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| C6W71_RS08640 () | 1655240..1655629 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6W71_RS08645 () | 1655626..1655952 | - | 327 | WP_000210167.1 | LexA family transcriptional regulator | - |
| C6W71_RS08650 () | 1655949..1656602 | - | 654 | WP_106889414.1 | phage N-6-adenine-methyltransferase | - |
| C6W71_RS08655 () | 1656697..1657515 | - | 819 | WP_000061520.1 | helix-turn-helix domain-containing protein | - |
| C6W71_RS08660 () | 1657512..1657736 | - | 225 | WP_000620696.1 | hypothetical protein | - |
| C6W71_RS08665 () | 1657733..1658896 | - | 1164 | WP_077166608.1 | Rha family phage regulatory protein | - |
| C6W71_RS08670 () | 1658893..1659444 | - | 552 | WP_000515854.1 | hypothetical protein | - |
| C6W71_RS08675 () | 1659437..1659697 | - | 261 | WP_001191670.1 | helix-turn-helix transcriptional regulator | - |
| C6W71_RS08685 () | 1659795..1660487 | + | 693 | WP_001020631.1 | helix-turn-helix transcriptional regulator | - |
| C6W71_RS08700 () | 1661189..1661551 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| C6W71_RS08705 () | 1661617..1662441 | + | 825 | WP_106889415.1 | DUF2303 family protein | - |
| C6W71_RS08710 () | 1662569..1663105 | + | 537 | WP_000008232.1 | 5'-deoxynucleotidase | - |
| C6W71_RS08715 () | 1663096..1663458 | + | 363 | WP_001242725.1 | hypothetical protein | - |
| C6W71_RS08720 () | 1663458..1664267 | + | 810 | WP_000206746.1 | hypothetical protein | - |
| C6W71_RS08725 () | 1664267..1664839 | + | 573 | WP_001061343.1 | 3'-5' exoribonuclease | - |
| C6W71_RS08730 () | 1664876..1665148 | + | 273 | WP_001093911.1 | pyocin activator PrtN family protein | - |
| C6W71_RS08735 () | 1665182..1665730 | - | 549 | WP_000089360.1 | hypothetical protein | Toxin Detail |
| C6W71_RS08740 () | 1665753..1666226 | - | 474 | WP_000287252.1 | SocA family protein | Antitoxin Detail |
| C6W71_RS08745 () | 1666750..1667265 | + | 516 | WP_000416264.1 | zinc uptake transcriptional repressor Zur | - |
| C6W71_RS08750 () | 1667307..1667516 | - | 210 | WP_001296638.1 | CsbD family protein | - |
| C6W71_RS08755 () | 1667632..1668957 | - | 1326 | WP_001318177.1 | MATE family efflux transporter DinF | - |
| C6W71_RS08760 () | 1669030..1669638 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| C6W71_RS08765 () | 1669748..1670116 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| C6W71_RS08770 () | 1670287..1672710 | + | 2424 | WP_052920530.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| C6W71_RS08775 () | 1672865..1673737 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| C6W71_RS08780 () | 1673750..1674247 | - | 498 | WP_001308201.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|