MGE detailed information
MGE type: Genomic_island MGE length: 30043 bp
Accession: NZ_CP027452 Location: 1341329..1371371 Organism: Escherichia coli strain 2014C-3338 Replicon: chromosome
Accession: NZ_CP027452 Location: 1341329..1371371 Organism: Escherichia coli strain 2014C-3338 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W71_RS06965 () | 1337866..1338591 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| C6W71_RS06970 () | 1338628..1339161 | - | 534 | WP_077775838.1 | type 1 fimbrial protein | - |
| C6W71_RS06975 () | 1339226..1339774 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| C6W71_RS06985 () | 1340255..1340851 | - | 597 | WP_000044710.1 | type 1 fimbria switch DNA invertase FimE | - |
| C6W71_RS06990 () | 1341329..1341931 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| C6W71_RS07005 () | 1343387..1344103 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| C6W71_RS07010 () | 1344123..1345229 | + | 1107 | WP_001317598.1 | N-acetylneuraminate epimerase | - |
| C6W71_RS07015 () | 1345294..1346274 | + | 981 | WP_000991418.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| C6W71_RS07020 () | 1346282..1346932 | - | 651 | WP_001037972.1 | HNH endonuclease | - |
| C6W71_RS07025 () | 1347069..1347941 | + | 873 | WP_000168564.1 | HNH endonuclease | - |
| C6W71_RS07030 () | 1347986..1348165 | + | 180 | WP_001153034.1 | hypothetical protein | - |
| C6W71_RS07035 () | 1348564..1350601 | - | 2038 | Protein_1286 | hypothetical protein | - |
| C6W71_RS07045 () | 1351421..1352218 | - | 798 | WP_032218979.1 | hypothetical protein | VF |
| C6W71_RS07050 () | 1352332..1352607 | - | 276 | WP_032218977.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6W71_RS07055 () | 1352611..1352859 | - | 249 | WP_032218975.1 | ribbon-helix-helix domain-containing protein | - |
| C6W71_RS07060 () | 1352936..1353769 | - | 834 | WP_032218973.1 | DUF4942 domain-containing protein | - |
| C6W71_RS07065 () | 1353884..1354225 | - | 342 | WP_001683515.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6W71_RS07070 () | 1354256..1354591 | - | 336 | WP_001296928.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6W71_RS07075 () | 1354591..1355064 | - | 474 | WP_001296921.1 | DNA repair protein RadC | - |
| C6W71_RS07080 () | 1355094..1355912 | - | 819 | WP_024223204.1 | DUF945 domain-containing protein | - |
| C6W71_RS07085 () | 1356149..1357102 | - | 954 | WP_052920587.1 | hypothetical protein | - |
| C6W71_RS07090 () | 1357695..1358309 | + | 615 | WP_000772910.1 | inovirus Gp2 family protein | - |
| C6W71_RS07095 () | 1358427..1358645 | + | 219 | WP_042106713.1 | AlpA family transcriptional regulator | - |
| C6W71_RS07100 () | 1358860..1359645 | - | 786 | WP_042106714.1 | hypothetical protein | - |
| C6W71_RS07105 () | 1359657..1360670 | - | 1014 | WP_042106715.1 | 50S ribosome-binding GTPase | - |
| C6W71_RS07110 () | 1360709..1361392 | - | 684 | WP_042106716.1 | WYL domain-containing protein | - |
| C6W71_RS07115 () | 1362063..1362606 | + | 544 | Protein_1301 | hypothetical protein | - |
| C6W71_RS07120 () | 1362603..1362875 | + | 273 | WP_042106720.1 | hypothetical protein | - |
| C6W71_RS07125 () | 1362903..1363877 | + | 975 | WP_042106722.1 | hypothetical protein | - |
| C6W71_RS26030 () | 1363915..1364208 | + | 294 | WP_001328589.1 | GIY-YIG nuclease family protein | - |
| C6W71_RS07135 () | 1364700..1365805 | + | 1106 | Protein_1305 | IS3 family transposase | - |
| C6W71_RS07145 () | 1366119..1368194 | - | 2076 | WP_001187275.1 | protease Lon-related BREX system protein BrxL | - |
| C6W71_RS07150 () | 1368205..1370802 | - | 2598 | WP_052920515.1 | BREX-1 system phosphatase PglZ type A | - |
| C6W71_RS07155 () | 1370802..1371371 | - | 570 | WP_000238714.1 | hypothetical protein | - |
| C6W71_RS07160 () | 1371365..1372486 | - | 1122 | WP_000371966.1 | AAA family ATPase | - |
| C6W71_RS07165 () | 1372486..1376115 | - | 3630 | WP_032218954.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|