MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 133279 bp
Accession: NZ_CP027449 Location: 2852639..2985917 Organism: Escherichia coli strain 2014C-3097 Replicon: chromosome
Accession: NZ_CP027449 Location: 2852639..2985917 Organism: Escherichia coli strain 2014C-3097 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W73_RS14695 () | 2849757..2850308 | - | 552 | WP_001272149.1 | fimbrial-like protein | - |
| C6W73_RS14700 () | 2850591..2850881 | - | 291 | WP_001297598.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| C6W73_RS14705 () | 2851255..2851908 | + | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| C6W73_RS14710 () | 2852169..2852339 | + | 171 | WP_000469266.1 | hypothetical protein | - |
| C6W73_RS14715 () | 2852397..2853170 | - | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| C6W73_RS14720 () | 2853313..2854101 | + | 789 | WP_001299419.1 | 4,5-DOPA dioxygenase extradiol | - |
| C6W73_RS14725 () | 2854139..2855299 | - | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| C6W73_RS14730 () | 2855305..2855976 | - | 672 | WP_000831543.1 | DUF1190 family protein | - |
| C6W73_RS14740 () | 2856124..2857605 | - | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| C6W73_RS14745 () | 2857810..2858439 | + | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| C6W73_RS14750 () | 2858440..2858862 | + | 423 | WP_000833393.1 | DUF1249 family protein | - |
| C6W73_RS14755 () | 2858887..2859714 | + | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| C6W73_RS14760 () | 2859714..2860295 | + | 582 | WP_000105733.1 | esterase YqiA | - |
| C6W73_RS14765 () | 2860324..2862216 | + | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| C6W73_RS14770 () | 2862264..2862578 | - | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| C6W73_RS14775 () | 2862609..2863190 | - | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| C6W73_RS14780 () | 2863509..2863841 | + | 333 | WP_000912120.1 | DUF2645 family protein | - |
| C6W73_RS14785 () | 2863887..2865236 | - | 1350 | WP_000673354.1 | two-component system sensor histidine kinase QseC | - |
| C6W73_RS14790 () | 2865233..2865892 | - | 660 | WP_001221502.1 | Regulator of RpoS | VF |
| C6W73_RS14795 () | 2866044..2866436 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| C6W73_RS14800 () | 2866489..2866971 | + | 483 | WP_000183494.1 | transcriptional regulator | - |
| C6W73_RS14810 () | 2867517..2869775 | + | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| C6W73_RS14815 () | 2870008..2870745 | + | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| C6W73_RS14820 () | 2870820..2872232 | + | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| C6W73_RS14825 () | 2872343..2874562 | + | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| C6W73_RS14830 () | 2874604..2874861 | - | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| C6W73_RS14835 () | 2874912..2875838 | - | 927 | WP_000691620.1 | YbjP/YqhG family protein | - |
| C6W73_RS14840 () | 2876038..2876865 | - | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| C6W73_RS14845 () | 2876970..2878133 | - | 1164 | WP_001058813.1 | alcohol dehydrogenase | - |
| C6W73_RS14850 () | 2878327..2879226 | + | 900 | WP_000817717.1 | DNA-binding transcriptional regulator YqhC | - |
| C6W73_RS14855 () | 2879266..2879925 | - | 660 | WP_000268419.1 | DedA family protein | - |
| C6W73_RS14860 () | 2880065..2881252 | - | 1188 | WP_001299407.1 | cystathionine beta-lyase | - |
| C6W73_RS14870 () | 2881504..2882238 | + | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| C6W73_RS14875 () | 2882245..2882670 | + | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| C6W73_RS14880 () | 2882709..2883593 | - | 885 | WP_000018760.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| C6W73_RS14885 () | 2883784..2884278 | + | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| C6W73_RS14890 () | 2884318..2885358 | - | 1041 | WP_000262151.1 | L-glyceraldehyde 3-phosphate reductase | - |
| C6W73_RS14895 () | 2885515..2886402 | + | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| C6W73_RS14900 () | 2886521..2886808 | + | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| C6W73_RS14910 () | 2886997..2888115 | + | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| C6W73_RS14915 () | 2888118..2889104 | + | 987 | WP_001081882.1 | hydrogenase 2 operon protein HybA | - |
| C6W73_RS14920 () | 2889094..2890272 | + | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| C6W73_RS14925 () | 2890269..2891972 | + | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| C6W73_RS14930 () | 2891972..2892466 | + | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| C6W73_RS14935 () | 2892459..2892947 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| C6W73_RS14940 () | 2892940..2893281 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| C6W73_RS14945 () | 2893294..2893542 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| C6W73_RS14950 () | 2893665..2894531 | - | 867 | WP_001295515.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| C6W73_RS14955 () | 2894736..2896595 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| C6W73_RS14960 () | 2896887..2898386 | + | 1500 | WP_000933296.1 | inorganic phosphate transporter PitB | - |
| C6W73_RS14965 () | 2898435..2899127 | - | 693 | WP_001190783.1 | thymidylate kinase | - |
| C6W73_RS14970 () | 2899301..2900014 | + | 714 | WP_001076237.1 | thymidylate kinase | - |
| C6W73_RS14975 () | 2900046..2900804 | + | 759 | WP_000339531.1 | ATP-binding protein | - |
| C6W73_RS14980 () | 2900850..2902199 | + | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| C6W73_RS14985 () | 2902199..2903023 | + | 825 | WP_000984976.1 | hypothetical protein | - |
| C6W73_RS14990 () | 2903035..2903595 | + | 561 | WP_001299422.1 | YtfJ family protein | - |
| C6W73_RS14995 () | 2903626..2904696 | + | 1071 | WP_000779644.1 | LPS export ABC transporter permease LptF | - |
| C6W73_RS15000 () | 2904693..2905772 | + | 1080 | WP_001356132.1 | LPS export ABC transporter permease LptG | - |
| C6W73_RS15005 () | 2905807..2906979 | - | 1173 | WP_000524966.1 | 8-amino-7-oxononanoate synthase | VF |
| C6W73_RS15010 () | 2906979..2907227 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| C6W73_RS15015 () | 2907259..2908173 | - | 915 | WP_001077137.1 | NAD-dependent epimerase/dehydratase family protein | - |
| C6W73_RS15020 () | 2908170..2909891 | - | 1722 | WP_001355868.1 | 2-succinylbenzoate--CoA ligase | VF |
| C6W73_RS15030 () | 2910262..2911404 | + | 1143 | WP_000388786.1 | DNA-binding protein | - |
| C6W73_RS15035 () | 2911411..2912175 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| C6W73_RS15040 () | 2912421..2913920 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| C6W73_RS15045 () | 2913920..2914972 | + | 1053 | WP_106879167.1 | glycolate oxidase subunit GlcE | - |
| C6W73_RS15050 () | 2914983..2916206 | + | 1224 | WP_001194657.1 | glycolate oxidase subunit GlcF | - |
| C6W73_RS15055 () | 2916211..2916615 | + | 405 | WP_000853256.1 | protein GlcG | - |
| C6W73_RS15060 () | 2916637..2918808 | + | 2172 | WP_000084052.1 | malate synthase G | - |
| C6W73_RS15065 () | 2919163..2920845 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| C6W73_RS15075 () | 2921331..2925896 | + | 4566 | WP_001388406.1 | hypothetical protein | VF |
| C6W73_RS15080 () | 2926036..2926845 | + | 810 | WP_001317326.1 | hypothetical protein | VF |
| C6W73_RS15085 () | 2926911..2927321 | + | 411 | WP_001349452.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| C6W73_RS15090 () | 2927339..2928298 | + | 960 | WP_001388405.1 | hypothetical protein | VF |
| C6W73_RS15095 () | 2928328..2930388 | + | 2061 | WP_106879166.1 | hypothetical protein | VF |
| C6W73_RS15100 () | 2930388..2931881 | + | 1494 | WP_000249348.1 | hypothetical protein | VF |
| C6W73_RS15105 () | 2931881..2933104 | + | 1224 | WP_001173453.1 | hypothetical protein | VF |
| C6W73_RS15110 () | 2933121..2933576 | + | 456 | WP_000287130.1 | hypothetical protein | VF |
| C6W73_RS15115 () | 2933580..2934143 | + | 564 | WP_001115154.1 | hypothetical protein | VF |
| C6W73_RS15120 () | 2934140..2934511 | + | 372 | WP_000820126.1 | hypothetical protein | VF |
| C6W73_RS15125 () | 2934508..2935107 | + | 600 | WP_001255040.1 | hypothetical protein | VF |
| C6W73_RS15130 () | 2935110..2936087 | + | 978 | WP_000633220.1 | hypothetical protein | VF |
| C6W73_RS15135 () | 2936084..2937262 | + | 1179 | WP_000094974.1 | hypothetical protein | VF |
| C6W73_RS15140 () | 2937264..2937800 | + | 537 | WP_000942795.1 | hypothetical protein | VF |
| C6W73_RS15145 () | 2938143..2938985 | - | 843 | WP_001280537.1 | DUF4942 domain-containing protein | - |
| C6W73_RS15150 () | 2939070..2939267 | - | 198 | WP_000839249.1 | DUF957 domain-containing protein | - |
| C6W73_RS15155 () | 2939279..2939767 | - | 489 | WP_000779175.1 | hypothetical protein | - |
| C6W73_RS15160 () | 2939764..2940141 | - | 378 | WP_000854902.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6W73_RS15165 () | 2940188..2940562 | - | 375 | WP_001280952.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6W73_RS15170 () | 2940725..2940946 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| C6W73_RS15175 () | 2941009..2941485 | - | 477 | WP_001186726.1 | RadC family protein | - |
| C6W73_RS15180 () | 2941501..2941986 | - | 486 | WP_001562321.1 | antirestriction protein | - |
| C6W73_RS15185 () | 2942041..2942859 | - | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| C6W73_RS15195 () | 2942959..2943192 | - | 234 | WP_106879165.1 | DUF905 family protein | - |
| C6W73_RS15200 () | 2943271..2943726 | - | 456 | WP_032186189.1 | hypothetical protein | - |
| C6W73_RS15205 () | 2943802..2946318 | - | 2517 | WP_106879164.1 | hypothetical protein | - |
| C6W73_RS15210 () | 2946439..2949558 | - | 3120 | WP_106879163.1 | autotransporter adhesin Ag43 | - |
| C6W73_RS15215 () | 2949886..2950758 | - | 873 | WP_001069680.1 | GTPase family protein | - |
| C6W73_RS15225 () | 2951985..2953469 | + | 1485 | WP_001297234.1 | DUF3987 domain-containing protein | - |
| C6W73_RS15240 () | 2953791..2954393 | - | 603 | WP_000804459.1 | hypothetical protein | - |
| C6W73_RS15245 () | 2954480..2954686 | - | 207 | WP_000632607.1 | AlpA family transcriptional regulator | - |
| C6W73_RS15250 () | 2955479..2955628 | + | 150 | WP_071528427.1 | hemolysin activation protein | - |
| C6W73_RS15255 () | 2955974..2956171 | - | 198 | WP_000236763.1 | hypothetical protein | - |
| C6W73_RS15260 () | 2956375..2956944 | + | 570 | WP_000221481.1 | inovirus Gp2 family protein | - |
| C6W73_RS15265 () | 2957205..2957588 | + | 384 | WP_000271013.1 | hypothetical protein | - |
| C6W73_RS15270 () | 2957585..2958010 | + | 426 | WP_001013311.1 | hypothetical protein | - |
| C6W73_RS15275 () | 2958284..2959015 | - | 732 | Protein_2753 | IS3 family transposase ISSd1 | Transposase |
| C6W73_RS15280 () | 2959102..2959527 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| C6W73_RS15285 () | 2959524..2959874 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| C6W73_RS15290 () | 2959905..2961518 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| C6W73_RS15295 () | 2961562..2961822 | - | 261 | Protein_2757 | IS3 family transposase ISSfl10 | Transposase |
| C6W73_RS15300 () | 2961906..2962103 | + | 198 | WP_001367978.1 | inovirus-type Gp2 protein | - |
| C6W73_RS15305 () | 2962284..2962691 | + | 408 | WP_136760218.1 | inovirus-type Gp2 protein | - |
| C6W73_RS15310 () | 2963041..2963538 | + | 498 | WP_021552435.1 | hypothetical protein | - |
| C6W73_RS15315 () | 2963627..2964250 | + | 624 | WP_001366001.1 | hypothetical protein | - |
| C6W73_RS15320 () | 2964346..2964564 | + | 219 | Protein_2762 | hypothetical protein | - |
| C6W73_RS15325 () | 2964619..2964810 | - | 192 | WP_032186109.1 | DUF4222 domain-containing protein | - |
| C6W73_RS15330 () | 2965486..2967138 | + | 1653 | WP_001376511.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| C6W73_RS15335 () | 2967148..2967675 | + | 528 | WP_001243916.1 | hypothetical protein | VF |
| C6W73_RS15340 () | 2967691..2976663 | + | 8973 | WP_106884625.1 | hypothetical protein | VF |
| C6W73_RS15355 () | 2977471..2981124 | + | 3654 | Protein_2767 | hypothetical protein | VF |
| C6W73_RS15360 () | 2981111..2981347 | + | 237 | WP_000500956.1 | hypothetical protein | - |
| C6W73_RS27855 () | 2981451..2981765 | + | 315 | WP_024226416.1 | hypothetical protein | - |
| C6W73_RS15380 () | 2982335..2982883 | + | 549 | WP_072018345.1 | hypothetical protein | VF |
| C6W73_RS15385 () | 2983061..2984806 | + | 1746 | WP_042109858.1 | NERD domain-containing protein | - |
| C6W73_RS15395 () | 2985232..2986057 | + | 826 | Protein_2772 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| C6W73_RS15400 () | 2986298..2988979 | + | 2682 | WP_187767778.1 | DUF2726 domain-containing protein | - |
| C6W73_RS15405 () | 2989480..2990712 | + | 1233 | WP_106879159.1 | phosphoadenosine phosphosulfate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|